RNA–Protein interactions for RNA: ENST00000430086.1

CCDC88A-206, Transcript of coiled-coil domain containing 88A, humanhuman

TSL 3

Gene CCDC88A, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88A-206ENST00000430086 TSTD3H0UI37 97 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 H3BSA7 217 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 BHLHE40O14503 412 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 SOCS1O15524 211 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 GCM2O75603 506 aaPredicted RBP3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 CXorf1O96002 111 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 CTLA4P16410 223 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 CD34P28906 385 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 SERPINB1P30740 379 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 CRISP3P54108 245 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 ZCWPW2Q504Y3 356 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 TEX30Q5JUR7 227 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 TCF23Q7RTU1 214 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 FAM19A3Q7Z5A8 133 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 OOSP2Q86WS3 158 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 OR10G2Q8NGC3 310 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 OR4K5Q8NGD3 323 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 OR51A2Q8NGJ7 313 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 OR9I1Q8NGQ6 314 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 OR10A6Q8NH74 314 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 ZNRF2Q8NHG8 242 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 CHCHD7Q9BUK0 85 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 GTSF1LQ9H1H1 148 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 C8orf17Q9NRJ1 99 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 PCYT1BQ9Y5K3 369 aaPredicted RBP3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 KIF15Q9NS87 1388 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 SIGLEC1Q9BZZ2 1709 aa3.36□□□□□ -1.87
CCDC88A-206ENST00000430086 A0A096LNJ9 63 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 IGHV3-49A0A0A0MS15 119 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 ISLRO14498 428 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 ZNF324O75467 553 aaPredicted RBP3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 CDRT1O95170 752 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 CRHP06850 196 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 SULT1A3P0DMM9 295 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 SULT1A4P0DMN0 295 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 ORM2P19652 201 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 HSPA9P38646 679 aaKnown RBP3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 MAP2K4P45985 399 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 CTBP2P56545 445 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 LINC00303Q3SY05 128 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 DEFB125Q8N687 156 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 Q8N976 141 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 C12orf29Q8N999 325 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 OR2M3Q8NG83 312 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 OR2K2Q8NGT1 345 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 C2orf15Q8WU43 125 aaKnown RBP3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 PDXPQ96GD0 296 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 DERL3Q96Q80 235 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 OR52B2Q96RD2 323 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 TRIB3Q96RU7 358 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 TBL1YQ9BQ87 522 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 INIPQ9NRY2 104 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 IDI2-AS1Q9NZ38 188 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 DNAJC12Q9UKB3 198 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 TIMM22Q9Y584 194 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 MTUS2Q5JR59 1369 aa3.35□□□□□ -1.87
CCDC88A-206ENST00000430086 DYSFO75923 2080 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 IGHV1-45A0A0A0MS14 117 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 IGKV6-21A0A0C4DH24 114 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 OR11H12B2RN74 326 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 H0YJW9 148 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 PFDN1O60925 122 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 DEDDO75618 318 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 POP7O75817 140 aaKnown RBP3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 SEC11BP0C7V7 166 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 IDO1P14902 403 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 ALDH3A1P30838 453 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 MPIP34949 423 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 GABRA4P48169 554 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 GNG3P63215 75 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 FABP9Q0Z7S8 132 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 UBE2SQ16763 222 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 TMEM241Q24JQ0 296 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 IAH1Q2TAA2 248 aaPredicted RBP3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 RNASE13Q5GAN3 156 aaKnown RBP3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 LPCAT3Q6P1A2 487 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 ZFP2Q6ZN57 461 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 DPPA2Q7Z7J5 298 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 PHF13Q86YI8 300 aaPredicted RBP3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 STX19Q8N4C7 294 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 TMEM75Q8N9X5 138 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 OR11H1Q8NG94 326 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 OR11H2Q8NH07 326 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 MS4A6EQ96DS6 147 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 SLC25A44Q96H78 314 aaPredicted RBP3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 ABHD14BQ96IU4 210 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 PPP1R2P1Q96PQ5 205 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 AIF1LQ9BQI0 150 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 MED28Q9H204 178 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 ZNRD1Q9P1U0 126 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 RSL24D1Q9UHA3 163 aaKnown RBP3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 PYCARDQ9ULZ3 195 aa3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 UTP11Q9Y3A2 253 aaKnown RBP3.34□□□□□ -1.87
CCDC88A-206ENST00000430086 PIK3C2GO75747 1445 aa3.34□□□□□ -1.88
CCDC88A-206ENST00000430086 DNMT1P26358 1616 aaKnown RBP3.33□□□□□ -1.88
CCDC88A-206ENST00000430086 IGKV2-28A0A075B6P5 120 aa3.33□□□□□ -1.88
CCDC88A-206ENST00000430086 A0A1B0GVX0 72 aa3.33□□□□□ -1.88
CCDC88A-206ENST00000430086 C5orf63A6NC05 138 aa3.33□□□□□ -1.88
CCDC88A-206ENST00000430086 FAAHO00519 579 aa3.33□□□□□ -1.88
CCDC88A-206ENST00000430086 MRASO14807 208 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms