RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 PPIL1Q9Y3C6 166 aa6.6□□□□□ -1.35
SYNPO2-202ENST00000429713 SERTM2A0A1B0GWG4 89 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 DUSP3P51452 185 aaPredicted RBP6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 SHBQ15464 509 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 WSB2Q9NYS7 404 aaPredicted RBP6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 RCL1Q9Y2P8 373 aaKnown RBP6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 COA3Q9Y2R0 106 aaPredicted RBP6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 SMPD2O60906 423 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 MGAT2Q10469 447 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 BCORP1Q8N888 145 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 OR1L3Q8NH93 324 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 SLC25A33Q9BSK2 321 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 LRRC61Q9BV99 259 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 GPR132Q9UNW8 380 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 CSPG4Q6UVK1 2322 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 SSTR5P35346 364 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 RPL18Q07020 188 aaKnown RBP6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 Q0VG73 95 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 TESK1Q15569 626 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 ASTLQ6HA08 431 aaPredicted RBP6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 H2BFWTQ7Z2G1 175 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 MRPL21Q7Z2W9 205 aaKnown RBP6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 TMEM144Q7Z5S9 345 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 VSTM2AQ8TAG5 236 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 Q8WTZ3 238 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 MENTQ9BUN1 341 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 SNHG12Q9BXW3 62 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 OR2W1Q9Y3N9 320 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 SPCS1Q9Y6A9 102 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 LANCL1O43813 399 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 SELLP14151 372 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 SRYQ05066 204 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 ZNF77Q15935 545 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 LYSMD4Q5XG99 296 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 PIGCQ92535 297 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 ZNF707Q96C28 371 aaPredicted RBP6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 CNRIP1Q96F85 164 aaPredicted RBP6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 TBC1D29Q9UFV1 150 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 ZNF346Q9UL40 294 aaKnown RBP6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 TIMM8BQ9Y5J9 83 aaPredicted RBP6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 TUSC2O75896 110 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 IRF2P14316 349 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 UQCRFS1P47985 274 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 OR51H1Q8NH63 302 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 PSENENQ9NZ42 101 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 OR1A1Q9P1Q5 309 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 hADV38S2A0JD32 116 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 C1QL1O75973 258 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 IL18BPO95998 194 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 P04436 131 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 METAP1P53582 386 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 GUCA2AQ02747 115 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 CTHRC1Q96CG8 243 aa6.59□□□□□ -1.35
SYNPO2-202ENST00000429713 NXPH3O95157 252 aa6.59□□□□□ -1.36
SYNPO2-202ENST00000429713 CFIP05156 583 aa6.59□□□□□ -1.36
SYNPO2-202ENST00000429713 OR1D5P58170 312 aa6.59□□□□□ -1.36
SYNPO2-202ENST00000429713 RUNX1Q01196 453 aa6.59□□□□□ -1.36
SYNPO2-202ENST00000429713 NPEPL1Q8NDH3 523 aa6.59□□□□□ -1.36
SYNPO2-202ENST00000429713 C17orf47Q8NEP4 570 aa6.59□□□□□ -1.36
SYNPO2-202ENST00000429713 OR4X1Q8NH49 305 aa6.59□□□□□ -1.36
SYNPO2-202ENST00000429713 ARPC1AQ92747 370 aa6.59□□□□□ -1.36
SYNPO2-202ENST00000429713 NDFIP1Q9BT67 221 aa6.59□□□□□ -1.36
SYNPO2-202ENST00000429713 SCGB1C2P0DMR2 95 aa6.59□□□□□ -1.36
SYNPO2-202ENST00000429713 ZNF17P17021 662 aa6.59□□□□□ -1.36
SYNPO2-202ENST00000429713 APOBEC1P41238 236 aaKnown RBP6.59□□□□□ -1.36
SYNPO2-202ENST00000429713 CLDND2Q8NHS1 167 aa6.59□□□□□ -1.36
SYNPO2-202ENST00000429713 C20orf141Q9NUB4 165 aa6.59□□□□□ -1.36
SYNPO2-202ENST00000429713 KCNE3Q9Y6H6 103 aa6.59□□□□□ -1.36
SYNPO2-202ENST00000429713 ACACBO00763 2458 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 OR7C1O76099 320 aaPredicted RBP6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 CA1P00915 261 aaPredicted RBP6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 ATP5G1P05496 136 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 ATP5G3P48201 142 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 ATP5G2Q06055 141 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 SMAD4Q13485 552 aaKnown RBP6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 CD226Q15762 336 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 SLC25A38Q96DW6 304 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 TMED7-TICAM2A0A0A6YYA0 188 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 KLF7O75840 302 aaPredicted RBP6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 OR1C1Q15619 314 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 ST6GALNAC2Q9UJ37 374 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 HELTA6NFD8 242 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 CRYM-AS1A6NIL9 109 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 OR2M3Q8NG83 312 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 PAPPA-AS1Q5QFB9 102 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 ANKRD37Q7Z713 158 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 C5orf17Q8NAS9 161 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 OR52M1Q8NGK5 317 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 SPSB4Q96A44 273 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 LANCL2Q9NS86 450 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 ZNF816-ZNF321PA0A0X1KG74 233 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 A0A1W2PNV4 684 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 FAM131CQ96AQ9 280 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 EAF1Q96JC9 268 aaPredicted RBP6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 UBE2ZQ9H832 354 aaPredicted RBP6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 SLC17A4Q9Y2C5 497 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 TRBV20-1A0A075B6N2 111 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 FUT7Q11130 342 aa6.58□□□□□ -1.36
SYNPO2-202ENST00000429713 MARCH3Q86UD3 253 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms