RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 HCP5Q6MZN7 132 aa13.91□□□□□ -0.18
LINC00887-203ENST00000429578 LPCAT3Q6P1A2 487 aa13.91□□□□□ -0.18
LINC00887-203ENST00000429578 FAHD2BQ6P2I3 314 aaPredicted RBP13.91□□□□□ -0.18
LINC00887-203ENST00000429578 OR11H6Q8NGC7 330 aa13.91□□□□□ -0.18
LINC00887-203ENST00000429578 SECTM1Q8WVN6 248 aa13.91□□□□□ -0.18
LINC00887-203ENST00000429578 FAHD2AQ96GK7 314 aa13.91□□□□□ -0.18
LINC00887-203ENST00000429578 SCGB3A2Q96PL1 93 aa13.91□□□□□ -0.18
LINC00887-203ENST00000429578 IFI27L2Q9H2X8 130 aa13.91□□□□□ -0.18
LINC00887-203ENST00000429578 RNASEK-C17orf49H0YIS7 233 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 LY6G6DO95868 133 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 IGLV1-47P01700 117 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 ZNF16P17020 682 aaPredicted RBP13.9□□□□□ -0.18
LINC00887-203ENST00000429578 COX7A1P24310 79 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 PRRX1P54821 245 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 BAMBIQ13145 260 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 PNKDQ8N490 385 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 ZDHHC22Q8N966 263 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 BEND2Q8NDZ0 799 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 SLC5A7Q9GZV3 580 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 OR2D2Q9H210 308 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 GHITMQ9H3K2 345 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 GPR132Q9UNW8 380 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 TOR1AO14656 332 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 GNRHRP30968 328 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 OXA1LQ15070 435 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 PLET1Q6UQ28 207 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 SLC38A6Q8IZM9 456 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 UPRTQ96BW1 309 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 ABHD14BQ96IU4 210 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 RSRP1Q9BUV0 290 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 C20orf85Q9H1P6 137 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 MMP28Q9H239 520 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 CCL28Q9NRJ3 127 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 NUDT15Q9NV35 164 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 RNF150Q9ULK6 438 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 VSIG4Q9Y279 399 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 NUBP2Q9Y5Y2 271 aa13.9□□□□□ -0.18
LINC00887-203ENST00000429578 SLC22A5O76082 557 aa13.89□□□□□ -0.19
LINC00887-203ENST00000429578 IGLV2-14P01704 120 aa13.89□□□□□ -0.19
LINC00887-203ENST00000429578 PGAM2P15259 253 aa13.89□□□□□ -0.19
LINC00887-203ENST00000429578 KLRD1Q13241 179 aa13.89□□□□□ -0.19
LINC00887-203ENST00000429578 ZNF626Q68DY1 528 aa13.89□□□□□ -0.19
LINC00887-203ENST00000429578 CCBE1Q6UXH8 406 aaPredicted RBP13.89□□□□□ -0.19
LINC00887-203ENST00000429578 ZNF645Q8N7E2 425 aa13.89□□□□□ -0.19
LINC00887-203ENST00000429578 ZFAND1Q8TCF1 268 aa13.89□□□□□ -0.19
LINC00887-203ENST00000429578 CHPT1Q8WUD6 406 aa13.89□□□□□ -0.19
LINC00887-203ENST00000429578 ZNF486Q96H40 463 aaPredicted RBP13.89□□□□□ -0.19
LINC00887-203ENST00000429578 C5orf66Q9H5L9 145 aa13.89□□□□□ -0.19
LINC00887-203ENST00000429578 PIPOXQ9P0Z9 390 aa13.89□□□□□ -0.19
LINC00887-203ENST00000429578 ZNRD1Q9P1U0 126 aa13.89□□□□□ -0.19
LINC00887-203ENST00000429578 CSPG4Q6UVK1 2322 aa13.89□□□□□ -0.19
LINC00887-203ENST00000429578 RAB29O14966 203 aa13.88□□□□□ -0.19
LINC00887-203ENST00000429578 SPNP16150 400 aa13.88□□□□□ -0.19
LINC00887-203ENST00000429578 GPR12P47775 334 aa13.88□□□□□ -0.19
LINC00887-203ENST00000429578 UBE2E1P51965 193 aa13.88□□□□□ -0.19
LINC00887-203ENST00000429578 HLA-DRB5Q30154 266 aa13.88□□□□□ -0.19
LINC00887-203ENST00000429578 TRIM16LQ309B1 348 aa13.88□□□□□ -0.19
LINC00887-203ENST00000429578 ZNF818PQ6ZRF7 136 aa13.88□□□□□ -0.19
LINC00887-203ENST00000429578 ODF3L1Q8IXM7 274 aa13.88□□□□□ -0.19
LINC00887-203ENST00000429578 LYG1Q8N1E2 194 aa13.88□□□□□ -0.19
LINC00887-203ENST00000429578 MINDY2Q8NBR6 621 aa13.88□□□□□ -0.19
LINC00887-203ENST00000429578 OR10X1Q8NGY0 326 aa13.88□□□□□ -0.19
LINC00887-203ENST00000429578 LHX4Q969G2 390 aa13.88□□□□□ -0.19
LINC00887-203ENST00000429578 AKR1E2Q96JD6 320 aa13.88□□□□□ -0.19
LINC00887-203ENST00000429578 ZNF221Q9UK13 617 aa13.88□□□□□ -0.19
LINC00887-203ENST00000429578 KCNS2Q9ULS6 477 aa13.88□□□□□ -0.19
LINC00887-203ENST00000429578 FLVCR2Q9UPI3 526 aa13.88□□□□□ -0.19
LINC00887-203ENST00000429578 GAB2Q9UQC2 676 aa13.88□□□□□ -0.19
LINC00887-203ENST00000429578 SVEP1Q4LDE5 3571 aa13.88□□□□□ -0.19
LINC00887-203ENST00000429578 NIPBLQ6KC79 2804 aaeCLIP13.88□□□□□ -0.19
LINC00887-203ENST00000429578 TRAV6A0A075B6T7 132 aa13.87□□□□□ -0.19
LINC00887-203ENST00000429578 ODF3BA8MYP8 253 aa13.87□□□□□ -0.19
LINC00887-203ENST00000429578 HSD17B6O14756 317 aa13.87□□□□□ -0.19
LINC00887-203ENST00000429578 CTSDP07339 412 aaPredicted RBP13.87□□□□□ -0.19
LINC00887-203ENST00000429578 MSMO1Q15800 293 aa13.87□□□□□ -0.19
LINC00887-203ENST00000429578 PDZD9Q8IXQ8 264 aa13.87□□□□□ -0.19
LINC00887-203ENST00000429578 BVESQ8NE79 360 aa13.87□□□□□ -0.19
LINC00887-203ENST00000429578 CREB3L1Q96BA8 519 aa13.87□□□□□ -0.19
LINC00887-203ENST00000429578 RTBDNQ9BSG5 229 aaPredicted RBP13.87□□□□□ -0.19
LINC00887-203ENST00000429578 MARVELD1Q9BSK0 173 aa13.87□□□□□ -0.19
LINC00887-203ENST00000429578 C14orf166Q9Y224 244 aaKnown RBP13.87□□□□□ -0.19
LINC00887-203ENST00000429578 TLN2Q9Y4G6 2542 aa13.87□□□□□ -0.19
LINC00887-203ENST00000429578 SAA2-SAA4A0A096LPE2 208 aa13.87□□□□□ -0.19
LINC00887-203ENST00000429578 CENPVL3A0A0U1RRI6 287 aa13.87□□□□□ -0.19
LINC00887-203ENST00000429578 GPR31O00270 319 aa13.87□□□□□ -0.19
LINC00887-203ENST00000429578 ARPC1BO15143 372 aaKnown RBP13.87□□□□□ -0.19
LINC00887-203ENST00000429578 AVPP01185 164 aa13.87□□□□□ -0.19
LINC00887-203ENST00000429578 RLN1P04808 185 aa13.87□□□□□ -0.19
LINC00887-203ENST00000429578 ARG1P05089 322 aa13.87□□□□□ -0.19
LINC00887-203ENST00000429578 H2AFB2P0C5Z0 115 aa13.87□□□□□ -0.19
LINC00887-203ENST00000429578 SAA2P0DJI9 122 aaPredicted RBP13.87□□□□□ -0.19
LINC00887-203ENST00000429578 PI3P19957 117 aa13.87□□□□□ -0.19
LINC00887-203ENST00000429578 CMTM1Q8IZ96 169 aa13.87□□□□□ -0.19
LINC00887-203ENST00000429578 CENPSQ8N2Z9 138 aa13.87□□□□□ -0.19
LINC00887-203ENST00000429578 DRAM1Q8N682 238 aa13.87□□□□□ -0.19
LINC00887-203ENST00000429578 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.87□□□□□ -0.19
LINC00887-203ENST00000429578 ZBTB34Q8NCN2 500 aa13.87□□□□□ -0.19
LINC00887-203ENST00000429578 OR4P4Q8NGL7 312 aa13.87□□□□□ -0.19
LINC00887-203ENST00000429578 SLC2A9Q9NRM0 540 aa13.87□□□□□ -0.19
LINC00887-203ENST00000429578 SDHAF2Q9NX18 166 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms