RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 IFITM10A6NMD0 228 aa11.07□□□□□ -0.64
LDB3-205ENST00000429277 OR2H2O95918 312 aa11.07□□□□□ -0.64
LDB3-205ENST00000429277 ADRA2AP08913 450 aa11.07□□□□□ -0.64
LDB3-205ENST00000429277 PSG9Q00887 426 aa11.07□□□□□ -0.64
LDB3-205ENST00000429277 PCSK4Q6UW60 755 aa11.07□□□□□ -0.64
LDB3-205ENST00000429277 OR1K1Q8NGR3 316 aa11.07□□□□□ -0.64
LDB3-205ENST00000429277 CCL13Q99616 98 aa11.07□□□□□ -0.64
LDB3-205ENST00000429277 CHRNA10Q9GZZ6 450 aa11.07□□□□□ -0.64
LDB3-205ENST00000429277 IDI2-AS1Q9NZ38 188 aa11.07□□□□□ -0.64
LDB3-205ENST00000429277 NANOS3P60323 173 aaKnown RBP11.06□□□□□ -0.64
LDB3-205ENST00000429277 ZNF79Q15937 498 aa11.06□□□□□ -0.64
LDB3-205ENST00000429277 C19orf54Q5BKX5 351 aa11.06□□□□□ -0.64
LDB3-205ENST00000429277 PIMREGQ9BSJ6 248 aa11.06□□□□□ -0.64
LDB3-205ENST00000429277 TMEM56-RWDD3S4R434 201 aa11.06□□□□□ -0.64
LDB3-205ENST00000429277 CYB5R3P00387 301 aaPredicted RBP11.06□□□□□ -0.64
LDB3-205ENST00000429277 HSPB1P04792 205 aaKnown RBP11.06□□□□□ -0.64
LDB3-205ENST00000429277 EFNB2P52799 333 aa11.06□□□□□ -0.64
LDB3-205ENST00000429277 TMEM252Q8N6L7 170 aa11.06□□□□□ -0.64
LDB3-205ENST00000429277 KNTC1P50748 2209 aa11.06□□□□□ -0.64
LDB3-205ENST00000429277 WNT5AP41221 380 aa11.06□□□□□ -0.64
LDB3-205ENST00000429277 MFAP4P55083 255 aa11.06□□□□□ -0.64
LDB3-205ENST00000429277 DNM1P46Q6ZS02 220 aa11.06□□□□□ -0.64
LDB3-205ENST00000429277 PRNTQ86SH4 94 aa11.06□□□□□ -0.64
LDB3-205ENST00000429277 PRO1933Q9H354 126 aa11.06□□□□□ -0.64
LDB3-205ENST00000429277 PPP1R3EQ9H7J1 279 aa11.06□□□□□ -0.64
LDB3-205ENST00000429277 METTL1Q9UBP6 276 aaKnown RBP11.06□□□□□ -0.64
LDB3-205ENST00000429277 COX6CP09669 75 aa11.06□□□□□ -0.64
LDB3-205ENST00000429277 HTN1P15515 57 aa11.06□□□□□ -0.64
LDB3-205ENST00000429277 FAM106AQ4KMX7 169 aa11.06□□□□□ -0.64
LDB3-205ENST00000429277 RHOVQ96L33 236 aa11.06□□□□□ -0.64
LDB3-205ENST00000429277 C16orf92Q96LL3 132 aa11.06□□□□□ -0.64
LDB3-205ENST00000429277 GPR132Q9UNW8 380 aa11.06□□□□□ -0.64
LDB3-205ENST00000429277 A0A087X0M5 115 aa11.06□□□□□ -0.64
LDB3-205ENST00000429277 A0A1B0GX30 115 aa11.06□□□□□ -0.64
LDB3-205ENST00000429277 GPA33Q99795 319 aa11.06□□□□□ -0.64
LDB3-205ENST00000429277 C17orf51A8MQB3 221 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 HLA-DQA1P01909 254 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 LINC00869P0C866 280 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 UBE2V2Q15819 145 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 TM4SF20Q53R12 229 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 ITLN1Q8WWA0 313 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 CISD1Q9NZ45 108 aaKnown RBP11.05□□□□□ -0.64
LDB3-205ENST00000429277 PTGDSP41222 190 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 RRN3P1Q2M238 152 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 ZNF880Q6PDB4 577 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 ERASQ7Z444 233 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 FAM181AQ8N9Y4 354 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 DNASE2BQ8WZ79 361 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 OPN3Q9H1Y3 402 aaPredicted RBP11.05□□□□□ -0.64
LDB3-205ENST00000429277 KCNK7Q9Y2U2 307 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 KLHDC2Q9Y2U9 406 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 RNF115Q9Y4L5 304 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 IGKV3-7A0A075B6H7 116 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 IGLV1-36A0A0B4J1U3 117 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 OR8A1Q8NGG7 326 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 TMEM186Q96B77 213 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 NRTNQ99748 197 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 ODAMA1E959 279 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 ZNF729A6NN14 1252 aaPredicted RBP11.05□□□□□ -0.64
LDB3-205ENST00000429277 MFAP2P55001 183 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 RPL24P83731 157 aaKnown RBP11.05□□□□□ -0.64
LDB3-205ENST00000429277 WFDC3Q8IUB2 231 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 SGMS2Q8NHU3 365 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 DDB2Q92466 427 aa11.05□□□□□ -0.64
LDB3-205ENST00000429277 J3KRW8 73 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 TSPOP30536 169 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 PKIAP61925 76 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 TWIST1Q15672 202 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 SLC22A18ASQ8N1D0 253 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 OR1N2Q8NGR9 330 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 ISOC2Q96AB3 205 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 SMIM12Q96EX1 92 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 TRAV39A0A0B4J263 110 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 REG1BP48304 166 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 SUCLG1P53597 346 aaKnown RBP11.04□□□□□ -0.64
LDB3-205ENST00000429277 HSPE1P61604 102 aaKnown RBP11.04□□□□□ -0.64
LDB3-205ENST00000429277 SAP25Q8TEE9 199 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 HDHD3Q9BSH5 251 aaPredicted RBP11.04□□□□□ -0.64
LDB3-205ENST00000429277 ELOVL5Q9NYP7 299 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 CALYQ9NYX4 217 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 AMMECR1LQ6DCA0 310 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 OR9G1Q8NH87 305 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 DYRK2Q92630 601 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 TMEM45BQ96B21 275 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 GALNT14Q96FL9 552 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 TMEM70Q9BUB7 260 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 PILRBQ9UKJ0 227 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 LOC390937A0A1W2PQ73 354 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 PF4V1P10720 104 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 MUC15Q8N387 334 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 ZPLD1Q8TCW7 415 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 RAX2Q96IS3 184 aa11.04□□□□□ -0.64
LDB3-205ENST00000429277 IGKV1-8A0A0C4DH67 115 aa11.03□□□□□ -0.64
LDB3-205ENST00000429277 NTN1O95631 604 aa11.03□□□□□ -0.64
LDB3-205ENST00000429277 IGHMP01871 453 aa11.03□□□□□ -0.64
LDB3-205ENST00000429277 MEF2BQ02080 365 aaPredicted RBP11.03□□□□□ -0.64
LDB3-205ENST00000429277 NCMAPQ5T1S8 102 aa11.03□□□□□ -0.64
LDB3-205ENST00000429277 LSM10Q969L4 123 aaKnown RBP11.03□□□□□ -0.64
LDB3-205ENST00000429277 HSPB7Q9UBY9 170 aa11.03□□□□□ -0.64
LDB3-205ENST00000429277 RGPD4Q7Z3J3 1758 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms