RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 OR1L1Q8NH94 360 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 DCTN5Q9BTE1 182 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 OR2D2Q9H210 308 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 FGF7P21781 194 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 IL2RGP31785 369 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 CEACAM21Q3KPI0 293 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 ATP1A1-AS1Q5TC04 95 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 TIPARPQ7Z3E1 657 aaKnown RBP10.59□□□□□ -0.71
CDH3-202ENST00000429102 HAPLN4Q86UW8 402 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 FAM185AQ8N0U4 392 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 VKORC1L1Q8N0U8 176 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 FGFRL1Q8N441 504 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 OR13D1Q8NGV5 346 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 MRGPRDQ8TDS7 321 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 HIST1H2BLQ99880 126 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 OR2J1Q9GZK6 312 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 OBP2BQ9NPH6 170 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 TCFL5Q9UL49 500 aa10.59□□□□□ -0.71
CDH3-202ENST00000429102 K7ESF4 209 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 DVL1O14640 695 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 LYZL6O75951 148 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 MT-CO3P00414 261 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 PMELP40967 661 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 GALR1P47211 349 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 TFF3Q07654 80 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 ABHD17BQ5VST6 288 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 RPP25LQ8N5L8 163 aaKnown RBP10.58□□□□□ -0.72
CDH3-202ENST00000429102 MISP3Q96FF7 219 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 GPR87Q9BY21 358 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 PRDM13Q9H4Q3 707 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 RNF115Q9Y4L5 304 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 TRAV38-1A0A0B4J264 116 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 ARG2P78540 354 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 FFAR4Q5NUL3 377 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 RNF138Q8WVD3 245 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 OR5P3Q8WZ94 311 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 IL22RA2Q969J5 263 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 REPIN1Q9BWE0 567 aaKnown RBP10.58□□□□□ -0.72
CDH3-202ENST00000429102 SF3B5Q9BWJ5 86 aaKnown RBP10.58□□□□□ -0.72
CDH3-202ENST00000429102 CBLN4Q9NTU7 201 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 SPTA1P02549 2419 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 ZG16O60844 167 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 NAPSAO96009 420 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 UCP2P55851 309 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 HBG1P69891 147 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 HBG2P69892 147 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 PPP1R32Q7Z5V6 425 aa10.58□□□□□ -0.72
CDH3-202ENST00000429102 TOX3O15405 576 aaPredicted RBP10.57□□□□□ -0.72
CDH3-202ENST00000429102 PAX6P26367 422 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 THBS3P49746 956 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 OR8G1Q15617 311 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 TMEM241Q24JQ0 296 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 BSXQ3C1V8 233 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 ZNF525Q8N782 197 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 ZNF709Q8N972 641 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 H0Y980 276 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 OR2H2O95918 312 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 OPN1MWP04001 364 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 OPN1MW2P0DN77 364 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 OPN1MW3P0DN78 364 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 GZMHP20718 246 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 FABP6P51161 128 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 PRR31Q5SQ13 230 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 FAM78BQ5VT40 261 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 ZNF295-AS1Q8N0V1 137 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 OR10A7Q8NGE5 316 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 OR10G4Q8NGN3 311 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 OR10G9Q8NGN4 311 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 OR10G7Q8NGN6 311 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 APOBEC3DQ96AK3 386 aaPredicted RBP10.57□□□□□ -0.72
CDH3-202ENST00000429102 ADGRG4Q8IZF6 3080 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 PTBP3O95758 552 aaKnown RBP10.57□□□□□ -0.72
CDH3-202ENST00000429102 SERPINA7P05543 415 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 ACSM6Q6P461 480 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 OR5D13Q8NGL4 314 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 CT55Q8WUE5 264 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 FAM103A1Q9BTL3 118 aaKnown RBP10.57□□□□□ -0.72
CDH3-202ENST00000429102 C1QTNF5Q9BXJ0 243 aa10.57□□□□□ -0.72
CDH3-202ENST00000429102 TCAPO15273 167 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 AGFG2O95081 481 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 HIST1H1BP16401 226 aaKnown RBP10.56□□□□□ -0.72
CDH3-202ENST00000429102 RAB4BP61018 213 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 IL11RAQ14626 422 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 SLC35E3Q7Z769 313 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 DRAM1Q8N682 238 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 CNEP1R1Q8N9A8 125 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 DERL1Q9BUN8 251 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 SDF2L1Q9HCN8 221 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 TIMM8BQ9Y5J9 83 aaPredicted RBP10.56□□□□□ -0.72
CDH3-202ENST00000429102 DMXL1Q9Y485 3027 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 A0A1B0GU03 582 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 ZNF320A2RRD8 509 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 GRIFINA4D1Z8 144 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 GATCO43716 136 aaKnown RBP10.56□□□□□ -0.72
CDH3-202ENST00000429102 CYB5R3P00387 301 aaPredicted RBP10.56□□□□□ -0.72
CDH3-202ENST00000429102 PSMB3P49720 205 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 FOXL2NBQ6ZUU3 175 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 TCF23Q7RTU1 214 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 M1APQ8TC57 530 aa10.56□□□□□ -0.72
CDH3-202ENST00000429102 TAF15Q92804 592 aaKnown RBP eCLIP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms