RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 ZNF880Q6PDB4 577 aa8.37□□□□□ -1.07
SNX13-203ENST00000428135 ABHD12Q8N2K0 398 aa8.37□□□□□ -1.07
SNX13-203ENST00000428135 APCDD1LQ8NCL9 501 aa8.37□□□□□ -1.07
SNX13-203ENST00000428135 WDFY2Q96P53 400 aa8.37□□□□□ -1.07
SNX13-203ENST00000428135 IGKV1D-42A0A075B6H8 117 aa8.37□□□□□ -1.07
SNX13-203ENST00000428135 C11orf94C9JXX5 98 aa8.37□□□□□ -1.07
SNX13-203ENST00000428135 HOXD4P09016 255 aaPredicted RBP8.37□□□□□ -1.07
SNX13-203ENST00000428135 PEAR1Q5VY43 1037 aaPredicted RBP8.37□□□□□ -1.07
SNX13-203ENST00000428135 LINC00299Q6ZSB3 139 aa8.37□□□□□ -1.07
SNX13-203ENST00000428135 TECRQ9NZ01 308 aaKnown RBP8.37□□□□□ -1.07
SNX13-203ENST00000428135 ESPL1Q14674 2120 aa8.37□□□□□ -1.07
SNX13-203ENST00000428135 TRAV34A0A0B4J273 112 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 CELA3BP08861 270 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 CD81P60033 236 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 FGF12P61328 243 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 SUMO1P63165 101 aaKnown RBP8.36□□□□□ -1.07
SNX13-203ENST00000428135 EWSR1Q01844 656 aaKnown RBP eCLIP8.36□□□□□ -1.07
SNX13-203ENST00000428135 DCAF12L2Q5VW00 463 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 TCTE3Q8IZS6 198 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 REPIN1Q9BWE0 567 aaKnown RBP8.36□□□□□ -1.07
SNX13-203ENST00000428135 TMPRSS5Q9H3S3 457 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 ALX3O95076 343 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 COL8A1P27658 744 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 RPL27AP46776 148 aaKnown RBP8.36□□□□□ -1.07
SNX13-203ENST00000428135 HOXA4Q00056 320 aaPredicted RBP8.36□□□□□ -1.07
SNX13-203ENST00000428135 RUNX1Q01196 453 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 UNQ6494/PRO21346Q6UXR6 183 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 LCTP09848 1927 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 IGLV1-36A0A0B4J1U3 117 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 CD1BP29016 333 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 PDLIM4P50479 330 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 RNF151Q2KHN1 245 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 STXBP6Q8NFX7 210 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 SSTR5P35346 364 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 PI4KAP42356 2102 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 SLC35B1P78383 322 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 KLF9Q13886 244 aaPredicted RBP8.36□□□□□ -1.07
SNX13-203ENST00000428135 RPEL1Q2QD12 228 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 C16orf92Q96LL3 132 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 SFXN3Q9BWM7 321 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 LPAR5Q9H1C0 372 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 Q9N2K0 584 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 ZDHHC8Q9ULC8 765 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 RNF24Q9Y225 148 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 CHCHD2Q9Y6H1 151 aaPredicted RBP8.36□□□□□ -1.07
SNX13-203ENST00000428135 MGAMO43451 1857 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 ZNF646O15015 1829 aaPredicted RBP8.36□□□□□ -1.07
SNX13-203ENST00000428135 LOC389332A0A1B0GUA5 103 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 TFF1P04155 84 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 SLC35E4Q6ICL7 350 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 SHISA5Q8N114 240 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 LRRC75AQ8NAA5 344 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 SGK494Q96LW2 274 aa8.36□□□□□ -1.07
SNX13-203ENST00000428135 ZNF703Q9H7S9 590 aaPredicted RBP8.36□□□□□ -1.07
SNX13-203ENST00000428135 IGHV3OR16-8A0A075B7F1 116 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 LYNX1G3V0Z9 82 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 LYNX1P0DP58 116 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 RPL7P18124 248 aaKnown RBP8.35□□□□□ -1.07
SNX13-203ENST00000428135 LDLRAD3Q86YD5 345 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 ISOC2Q96AB3 205 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 ZNF837Q96EG3 531 aaPredicted RBP8.35□□□□□ -1.07
SNX13-203ENST00000428135 MMP26Q9NRE1 261 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 ZNF207O43670 478 aaKnown RBP8.35□□□□□ -1.07
SNX13-203ENST00000428135 IL24Q13007 206 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 C11orf44Q8N8P7 122 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 OR11H7Q8NGC8 314 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 DLL3Q9NYJ7 618 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 CALYQ9NYX4 217 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 CHD5Q8TDI0 1954 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 EGR4Q05215 589 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 TMEM255AQ5JRV8 349 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 DCAF16Q9NXF7 216 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 A0A0U1RQV5 110 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 CEACAM18A8MTB9 384 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 SYNGR3O43761 229 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 PF4P02776 101 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 UMODP07911 640 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 SCARF2Q96GP6 870 aaPredicted RBP8.35□□□□□ -1.07
SNX13-203ENST00000428135 PHOX2AO14813 284 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 TMEM127O75204 238 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 HSPB1P04792 205 aaKnown RBP8.35□□□□□ -1.07
SNX13-203ENST00000428135 LINC00271P0C7V0 271 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 GHITMQ9H3K2 345 aa8.35□□□□□ -1.07
SNX13-203ENST00000428135 IGKV1D-43A0A0B4J1Z2 117 aa8.34□□□□□ -1.07
SNX13-203ENST00000428135 ODAMA1E959 279 aa8.34□□□□□ -1.07
SNX13-203ENST00000428135 KLF4O43474 513 aa8.34□□□□□ -1.07
SNX13-203ENST00000428135 UBE2V2Q15819 145 aa8.34□□□□□ -1.07
SNX13-203ENST00000428135 TM4SF20Q53R12 229 aa8.34□□□□□ -1.07
SNX13-203ENST00000428135 TEPPQ6URK8 271 aa8.34□□□□□ -1.07
SNX13-203ENST00000428135 SLC25A42Q86VD7 318 aa8.34□□□□□ -1.07
SNX13-203ENST00000428135 OR2D3Q8NGH3 330 aa8.34□□□□□ -1.07
SNX13-203ENST00000428135 ST6GAL2Q96JF0 529 aa8.34□□□□□ -1.07
SNX13-203ENST00000428135 SELENOKQ9Y6D0 94 aa8.34□□□□□ -1.07
SNX13-203ENST00000428135 SRSF10O75494 262 aaKnown RBP8.34□□□□□ -1.07
SNX13-203ENST00000428135 P01737 135 aa8.34□□□□□ -1.07
SNX13-203ENST00000428135 SCGB1C2P0DMR2 95 aa8.34□□□□□ -1.07
SNX13-203ENST00000428135 PLAURQ03405 335 aa8.34□□□□□ -1.07
SNX13-203ENST00000428135 ZNF738Q8NE65 137 aa8.34□□□□□ -1.07
SNX13-203ENST00000428135 IL22RA2Q969J5 263 aa8.34□□□□□ -1.07
SNX13-203ENST00000428135 YAE1D1Q9NRH1 226 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms