RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 PPP1CBP62140 327 aa13.19□□□□□ -0.3
TVP23C-203ENST00000428082 TLE4Q04727 773 aa13.19□□□□□ -0.3
TVP23C-203ENST00000428082 OR1J1Q8NGS3 322 aa13.19□□□□□ -0.3
TVP23C-203ENST00000428082 RNASE11Q8TAA1 199 aaKnown RBP13.19□□□□□ -0.3
TVP23C-203ENST00000428082 LINC01560Q8TB33 94 aa13.19□□□□□ -0.3
TVP23C-203ENST00000428082 PLPPR1Q8TBJ4 325 aa13.19□□□□□ -0.3
TVP23C-203ENST00000428082 ZNF488Q96MN9 340 aa13.19□□□□□ -0.3
TVP23C-203ENST00000428082 MAGT1Q9H0U3 335 aa13.19□□□□□ -0.3
TVP23C-203ENST00000428082 HIPK2Q9H2X6 1198 aa13.19□□□□□ -0.3
TVP23C-203ENST00000428082 LIN7CQ9NUP9 197 aaKnown RBP13.19□□□□□ -0.3
TVP23C-203ENST00000428082 CADP27708 2225 aa13.19□□□□□ -0.3
TVP23C-203ENST00000428082 MEX3AA1L020 520 aaKnown RBP13.19□□□□□ -0.3
TVP23C-203ENST00000428082 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.19□□□□□ -0.3
TVP23C-203ENST00000428082 M0R036 132 aa13.19□□□□□ -0.3
TVP23C-203ENST00000428082 SH2D1BO14796 132 aa13.19□□□□□ -0.3
TVP23C-203ENST00000428082 IFNA5P01569 189 aa13.19□□□□□ -0.3
TVP23C-203ENST00000428082 MT-ND4LP03901 98 aa13.19□□□□□ -0.3
TVP23C-203ENST00000428082 AKR1C8PQ5T2L2 129 aa13.19□□□□□ -0.3
TVP23C-203ENST00000428082 ZNF497Q6ZNH5 498 aa13.19□□□□□ -0.3
TVP23C-203ENST00000428082 C20orf204Q6ZNR8 217 aa13.19□□□□□ -0.3
TVP23C-203ENST00000428082 RBMXL1Q96E39 390 aaKnown RBP13.19□□□□□ -0.3
TVP23C-203ENST00000428082 KIAA1456Q9P272 454 aa13.19□□□□□ -0.3
TVP23C-203ENST00000428082 TRAPPC2LQ9UL33 140 aa13.19□□□□□ -0.3
TVP23C-203ENST00000428082 WSB1Q9Y6I7 421 aa13.19□□□□□ -0.3
TVP23C-203ENST00000428082 UBR5O95071 2799 aaPredicted RBP13.18□□□□□ -0.3
TVP23C-203ENST00000428082 IGHV2OR16-5A0A0B4J2B6 119 aa13.18□□□□□ -0.3
TVP23C-203ENST00000428082 C1orf196B1AJZ1 125 aa13.18□□□□□ -0.3
TVP23C-203ENST00000428082 SMPD2O60906 423 aa13.18□□□□□ -0.3
TVP23C-203ENST00000428082 TUBG1P23258 451 aa13.18□□□□□ -0.3
TVP23C-203ENST00000428082 OMGP23515 440 aa13.18□□□□□ -0.3
TVP23C-203ENST00000428082 FHITP49789 147 aa13.18□□□□□ -0.3
TVP23C-203ENST00000428082 SULT1A1P50225 295 aa13.18□□□□□ -0.3
TVP23C-203ENST00000428082 ERVK11-1P61568 191 aa13.18□□□□□ -0.3
TVP23C-203ENST00000428082 ZNF146Q15072 292 aa13.18□□□□□ -0.3
TVP23C-203ENST00000428082 C3orf36Q3SXR2 165 aa13.18□□□□□ -0.3
TVP23C-203ENST00000428082 AWAT1Q58HT5 328 aa13.18□□□□□ -0.3
TVP23C-203ENST00000428082 C14orf79Q96F83 325 aa13.18□□□□□ -0.3
TVP23C-203ENST00000428082 TUBG2Q9NRH3 451 aa13.18□□□□□ -0.3
TVP23C-203ENST00000428082 RNF115Q9Y4L5 304 aa13.18□□□□□ -0.3
TVP23C-203ENST00000428082 C7orf77A4D0Y5 90 aa13.17□□□□□ -0.3
TVP23C-203ENST00000428082 RBFOX3A6NFN3 312 aa13.17□□□□□ -0.3
TVP23C-203ENST00000428082 TNFSF12O43508 249 aa13.17□□□□□ -0.3
TVP23C-203ENST00000428082 LILRA1O75019 489 aa13.17□□□□□ -0.3
TVP23C-203ENST00000428082 RHBDL1O75783 438 aa13.17□□□□□ -0.3
TVP23C-203ENST00000428082 RNF224P0DH78 156 aa13.17□□□□□ -0.3
TVP23C-203ENST00000428082 SOHLH1Q5JUK2 328 aa13.17□□□□□ -0.3
TVP23C-203ENST00000428082 SCCPDHQ8NBX0 429 aa13.17□□□□□ -0.3
TVP23C-203ENST00000428082 ZBTB34Q8NCN2 500 aa13.17□□□□□ -0.3
TVP23C-203ENST00000428082 TMEM171Q8WVE6 324 aa13.17□□□□□ -0.3
TVP23C-203ENST00000428082 IL1F10Q8WWZ1 152 aa13.17□□□□□ -0.3
TVP23C-203ENST00000428082 USP9XQ93008 2570 aaPredicted RBP13.17□□□□□ -0.3
TVP23C-203ENST00000428082 GPR146Q96CH1 333 aa13.17□□□□□ -0.3
TVP23C-203ENST00000428082 TAAR3PQ9P1P4 343 aa13.17□□□□□ -0.3
TVP23C-203ENST00000428082 RNF150Q9ULK6 438 aa13.17□□□□□ -0.3
TVP23C-203ENST00000428082 WIPI2Q9Y4P8 454 aa13.17□□□□□ -0.3
TVP23C-203ENST00000428082 RBM7Q9Y580 266 aaKnown RBP13.17□□□□□ -0.3
TVP23C-203ENST00000428082 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.17□□□□□ -0.3
TVP23C-203ENST00000428082 IQCF6A8MYZ5 107 aa13.17□□□□□ -0.3
TVP23C-203ENST00000428082 SLC33A1O00400 549 aaPredicted RBP13.17□□□□□ -0.3
TVP23C-203ENST00000428082 OR2H2O95918 312 aa13.17□□□□□ -0.3
TVP23C-203ENST00000428082 SNRNP70P08621 437 aaKnown RBP13.17□□□□□ -0.3
TVP23C-203ENST00000428082 PGA5P0DJD9 388 aa13.17□□□□□ -0.3
TVP23C-203ENST00000428082 PTAFRP25105 342 aa13.17□□□□□ -0.3
TVP23C-203ENST00000428082 TAS2R30P59541 319 aa13.17□□□□□ -0.3
TVP23C-203ENST00000428082 SSX8Q7RTT4 187 aa13.17□□□□□ -0.3
TVP23C-203ENST00000428082 KCNIP1Q9NZI2 227 aa13.17□□□□□ -0.3
TVP23C-203ENST00000428082 FBXO7Q9Y3I1 522 aa13.17□□□□□ -0.3
TVP23C-203ENST00000428082 TXNL1O43396 289 aa13.16□□□□□ -0.3
TVP23C-203ENST00000428082 CST7O76096 145 aa13.16□□□□□ -0.3
TVP23C-203ENST00000428082 NXPH2O95156 264 aa13.16□□□□□ -0.3
TVP23C-203ENST00000428082 PSG2P11465 335 aa13.16□□□□□ -0.3
TVP23C-203ENST00000428082 CD40P25942 277 aa13.16□□□□□ -0.3
TVP23C-203ENST00000428082 PPP1CCP36873 323 aaKnown RBP13.16□□□□□ -0.3
TVP23C-203ENST00000428082 ERVS71-1P61550 626 aa13.16□□□□□ -0.3
TVP23C-203ENST00000428082 SRSF1Q07955 248 aaKnown RBP eCLIP13.16□□□□□ -0.3
TVP23C-203ENST00000428082 AKIRIN2Q53H80 203 aa13.16□□□□□ -0.3
TVP23C-203ENST00000428082 SPATA46Q5T0L3 261 aa13.16□□□□□ -0.3
TVP23C-203ENST00000428082 SLC25A24Q6NUK1 477 aa13.16□□□□□ -0.3
TVP23C-203ENST00000428082 C5orf24Q7Z6I8 188 aa13.16□□□□□ -0.3
TVP23C-203ENST00000428082 ZNF561Q8N587 486 aa13.16□□□□□ -0.3
TVP23C-203ENST00000428082 OR51H1Q8NH63 302 aa13.16□□□□□ -0.3
TVP23C-203ENST00000428082 CD300LFQ8TDQ1 290 aa13.16□□□□□ -0.3
TVP23C-203ENST00000428082 CLCC1Q96S66 551 aa13.16□□□□□ -0.3
TVP23C-203ENST00000428082 MBNL3Q9NUK0 354 aaKnown RBP13.16□□□□□ -0.3
TVP23C-203ENST00000428082 ANKHD1Q8IWZ3 2542 aaKnown RBP13.16□□□□□ -0.3
TVP23C-203ENST00000428082 DPRXA6NFQ7 191 aa13.15□□□□□ -0.3
TVP23C-203ENST00000428082 SIRPB1O00241 398 aa13.15□□□□□ -0.3
TVP23C-203ENST00000428082 CRYAAP02489 173 aa13.15□□□□□ -0.3
TVP23C-203ENST00000428082 PAX9P55771 341 aa13.15□□□□□ -0.3
TVP23C-203ENST00000428082 TMEM108Q6UXF1 575 aa13.15□□□□□ -0.3
TVP23C-203ENST00000428082 SCGB1C1Q8TD33 95 aa13.15□□□□□ -0.3
TVP23C-203ENST00000428082 OR2J1Q9GZK6 312 aa13.15□□□□□ -0.3
TVP23C-203ENST00000428082 FAM90A26D6RGX4 464 aa13.15□□□□□ -0.3
TVP23C-203ENST00000428082 C19orf84I3L1E1 186 aa13.15□□□□□ -0.3
TVP23C-203ENST00000428082 TMEM50AO95807 157 aa13.15□□□□□ -0.3
TVP23C-203ENST00000428082 HBG1P69891 147 aa13.15□□□□□ -0.3
TVP23C-203ENST00000428082 HBG2P69892 147 aa13.15□□□□□ -0.3
TVP23C-203ENST00000428082 BSPH1Q075Z2 132 aa13.15□□□□□ -0.3
TVP23C-203ENST00000428082 TESK1Q15569 626 aa13.15□□□□□ -0.3
TVP23C-203ENST00000428082 TMEM217Q8N7C4 229 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms