RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 SSX2Q16385 188 aa13.73□□□□□ -0.21
COL7A1-202ENST00000422991 LDLRAD3Q86YD5 345 aa13.73□□□□□ -0.21
COL7A1-202ENST00000422991 LYG1Q8N1E2 194 aa13.73□□□□□ -0.21
COL7A1-202ENST00000422991 GDPD1Q8N9F7 314 aa13.73□□□□□ -0.21
COL7A1-202ENST00000422991 TMEM229BQ8NBD8 167 aa13.73□□□□□ -0.21
COL7A1-202ENST00000422991 TOMM40LQ969M1 308 aa13.73□□□□□ -0.21
COL7A1-202ENST00000422991 MEGF9Q9H1U4 602 aa13.73□□□□□ -0.21
COL7A1-202ENST00000422991 OR2W1Q9Y3N9 320 aa13.73□□□□□ -0.21
COL7A1-202ENST00000422991 HILPDAQ9Y5L2 63 aa13.73□□□□□ -0.21
COL7A1-202ENST00000422991 SAA2-SAA4A0A096LPE2 208 aa13.72□□□□□ -0.21
COL7A1-202ENST00000422991 M0QYG6 137 aa13.72□□□□□ -0.21
COL7A1-202ENST00000422991 HSD17B6O14756 317 aa13.72□□□□□ -0.21
COL7A1-202ENST00000422991 CD74P04233 296 aa13.72□□□□□ -0.21
COL7A1-202ENST00000422991 CD3DP04234 171 aa13.72□□□□□ -0.21
COL7A1-202ENST00000422991 CSF1P09603 554 aa13.72□□□□□ -0.21
COL7A1-202ENST00000422991 SAA2P0DJI9 122 aaPredicted RBP13.72□□□□□ -0.21
COL7A1-202ENST00000422991 FCGR2CP31995 323 aa13.72□□□□□ -0.21
COL7A1-202ENST00000422991 TAS2R19P59542 299 aa13.72□□□□□ -0.21
COL7A1-202ENST00000422991 ZNF816Q0VGE8 651 aaPredicted RBP13.72□□□□□ -0.21
COL7A1-202ENST00000422991 DIAPH2-AS1Q14236 149 aa13.72□□□□□ -0.21
COL7A1-202ENST00000422991 VAX1Q5SQQ9 334 aa13.72□□□□□ -0.21
COL7A1-202ENST00000422991 ZNF660Q6AZW8 331 aaPredicted RBP13.72□□□□□ -0.21
COL7A1-202ENST00000422991 RPEQ96AT9 228 aa13.72□□□□□ -0.21
COL7A1-202ENST00000422991 ABHD14BQ96IU4 210 aa13.72□□□□□ -0.21
COL7A1-202ENST00000422991 SDHCQ99643 169 aaPredicted RBP13.72□□□□□ -0.21
COL7A1-202ENST00000422991 THAP7Q9BT49 309 aaPredicted RBP13.72□□□□□ -0.21
COL7A1-202ENST00000422991 OCEL1Q9H607 264 aa13.72□□□□□ -0.21
COL7A1-202ENST00000422991 TAS2R8Q9NYW2 309 aa13.72□□□□□ -0.21
COL7A1-202ENST00000422991 ATRQ13535 2644 aa13.72□□□□□ -0.21
COL7A1-202ENST00000422991 ANKRD20A5PA0PJZ0 165 aa13.71□□□□□ -0.21
COL7A1-202ENST00000422991 VGLL3A8MV65 326 aa13.71□□□□□ -0.21
COL7A1-202ENST00000422991 OR8U9P0C7N5 309 aa13.71□□□□□ -0.21
COL7A1-202ENST00000422991 AADACP22760 399 aa13.71□□□□□ -0.21
COL7A1-202ENST00000422991 RNASE10Q5GAN6 216 aaKnown RBP13.71□□□□□ -0.21
COL7A1-202ENST00000422991 CCDC144NLQ6NUI1 221 aa13.71□□□□□ -0.21
COL7A1-202ENST00000422991 Q6YL49 198 aa13.71□□□□□ -0.21
COL7A1-202ENST00000422991 ZNF833PQ6ZTB9 187 aa13.71□□□□□ -0.21
COL7A1-202ENST00000422991 OR8U1Q8NH10 309 aa13.71□□□□□ -0.21
COL7A1-202ENST00000422991 ZNF418Q8TF45 676 aaPredicted RBP13.71□□□□□ -0.21
COL7A1-202ENST00000422991 GIMAP1Q8WWP7 306 aa13.71□□□□□ -0.21
COL7A1-202ENST00000422991 S100ZQ8WXG8 99 aa13.71□□□□□ -0.21
COL7A1-202ENST00000422991 ZDHHC16Q969W1 377 aa13.71□□□□□ -0.21
COL7A1-202ENST00000422991 TINAGL1Q9GZM7 467 aaPredicted RBP13.71□□□□□ -0.21
COL7A1-202ENST00000422991 OR2D2Q9H210 308 aa13.71□□□□□ -0.21
COL7A1-202ENST00000422991 GHITMQ9H3K2 345 aa13.71□□□□□ -0.21
COL7A1-202ENST00000422991 PIPOXQ9P0Z9 390 aa13.71□□□□□ -0.21
COL7A1-202ENST00000422991 RNF150Q9ULK6 438 aa13.71□□□□□ -0.21
COL7A1-202ENST00000422991 IGKV1D-13A0A0B4J2D9 117 aa13.7□□□□□ -0.22
COL7A1-202ENST00000422991 A0A1W2PPI3 338 aa13.7□□□□□ -0.22
COL7A1-202ENST00000422991 RAB29O14966 203 aa13.7□□□□□ -0.22
COL7A1-202ENST00000422991 PPYP01298 95 aa13.7□□□□□ -0.22
COL7A1-202ENST00000422991 IGKV1-13P0DP09 117 aa13.7□□□□□ -0.22
COL7A1-202ENST00000422991 LUMP51884 338 aaPredicted RBP13.7□□□□□ -0.22
COL7A1-202ENST00000422991 AANATQ16613 207 aa13.7□□□□□ -0.22
COL7A1-202ENST00000422991 LRRC75BQ2VPJ9 315 aa13.7□□□□□ -0.22
COL7A1-202ENST00000422991 PLA1AQ53H76 456 aa13.7□□□□□ -0.22
COL7A1-202ENST00000422991 FAM71F2Q6NXP2 309 aa13.7□□□□□ -0.22
COL7A1-202ENST00000422991 STEAP1BQ6NZ63 245 aa13.7□□□□□ -0.22
COL7A1-202ENST00000422991 DHRS11Q6UWP2 260 aa13.7□□□□□ -0.22
COL7A1-202ENST00000422991 RBMS3Q6XE24 437 aaKnown RBP13.7□□□□□ -0.22
COL7A1-202ENST00000422991 OR8H3Q8N146 312 aa13.7□□□□□ -0.22
COL7A1-202ENST00000422991 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.7□□□□□ -0.22
COL7A1-202ENST00000422991 OR4D10Q8NGI6 311 aa13.7□□□□□ -0.22
COL7A1-202ENST00000422991 RTN4IP1Q8WWV3 396 aaPredicted RBP13.7□□□□□ -0.22
COL7A1-202ENST00000422991 ZNF251Q9BRH9 671 aa13.7□□□□□ -0.22
COL7A1-202ENST00000422991 ZNF221Q9UK13 617 aa13.7□□□□□ -0.22
COL7A1-202ENST00000422991 FBN1P35555 2871 aaKnown RBP13.69□□□□□ -0.22
COL7A1-202ENST00000422991 TXNL1O43396 289 aa13.69□□□□□ -0.22
COL7A1-202ENST00000422991 RAB3DO95716 219 aa13.69□□□□□ -0.22
COL7A1-202ENST00000422991 GAPDHP04406 335 aaKnown RBP13.69□□□□□ -0.22
COL7A1-202ENST00000422991 AKAIN1P0CW23 69 aa13.69□□□□□ -0.22
COL7A1-202ENST00000422991 GPR12P47775 334 aa13.69□□□□□ -0.22
COL7A1-202ENST00000422991 REG1BP48304 166 aa13.69□□□□□ -0.22
COL7A1-202ENST00000422991 DYNLT3P51808 116 aa13.69□□□□□ -0.22
COL7A1-202ENST00000422991 KLF9Q13886 244 aaPredicted RBP13.69□□□□□ -0.22
COL7A1-202ENST00000422991 RPL39P5Q59GN2 51 aa13.69□□□□□ -0.22
COL7A1-202ENST00000422991 TGIF2LXQ8IUE1 241 aa13.69□□□□□ -0.22
COL7A1-202ENST00000422991 ARRDC1Q8N5I2 433 aa13.69□□□□□ -0.22
COL7A1-202ENST00000422991 OR4C16Q8NGL9 310 aa13.69□□□□□ -0.22
COL7A1-202ENST00000422991 C5orf30Q96GV9 206 aa13.69□□□□□ -0.22
COL7A1-202ENST00000422991 ZNF2Q9BSG1 426 aaPredicted RBP13.69□□□□□ -0.22
COL7A1-202ENST00000422991 RBM7Q9Y580 266 aaKnown RBP13.69□□□□□ -0.22
COL7A1-202ENST00000422991 IGHV1-3A0A0C4DH29 117 aa13.68□□□□□ -0.22
COL7A1-202ENST00000422991 DNAJC9-AS1A6NH13 148 aa13.68□□□□□ -0.22
COL7A1-202ENST00000422991 J3QRK9 145 aa13.68□□□□□ -0.22
COL7A1-202ENST00000422991 TIMM23O14925 209 aa13.68□□□□□ -0.22
COL7A1-202ENST00000422991 HOXA3O43365 443 aaPredicted RBP13.68□□□□□ -0.22
COL7A1-202ENST00000422991 IGHV4-59P01825 116 aa13.68□□□□□ -0.22
COL7A1-202ENST00000422991 IER3P46695 156 aa13.68□□□□□ -0.22
COL7A1-202ENST00000422991 ARHGDIBP52566 201 aa13.68□□□□□ -0.22
COL7A1-202ENST00000422991 HILS1P60008 231 aa13.68□□□□□ -0.22
COL7A1-202ENST00000422991 HERV-K104P61576 105 aa13.68□□□□□ -0.22
COL7A1-202ENST00000422991 BAMBIQ13145 260 aa13.68□□□□□ -0.22
COL7A1-202ENST00000422991 MEF2DQ14814 521 aa13.68□□□□□ -0.22
COL7A1-202ENST00000422991 BAK1Q16611 211 aa13.68□□□□□ -0.22
COL7A1-202ENST00000422991 OR6F1Q8NGZ6 308 aa13.68□□□□□ -0.22
COL7A1-202ENST00000422991 SSMEM1Q8WWF3 244 aa13.68□□□□□ -0.22
COL7A1-202ENST00000422991 CFHR4Q92496 578 aa13.68□□□□□ -0.22
COL7A1-202ENST00000422991 MOB3AQ96BX8 217 aa13.68□□□□□ -0.22
COL7A1-202ENST00000422991 S1PR3Q99500 378 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms