RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 EPHA1P21709 976 aa12.74□□□□□ -0.37
DDX55-203ENST00000421670 LGALS4P56470 323 aa12.74□□□□□ -0.37
DDX55-203ENST00000421670 AP3S2P59780 193 aa12.74□□□□□ -0.37
DDX55-203ENST00000421670 TMEM17Q86X19 198 aa12.74□□□□□ -0.37
DDX55-203ENST00000421670 BCL6BQ8N143 479 aaPredicted RBP12.74□□□□□ -0.37
DDX55-203ENST00000421670 LINC00311Q8N616 119 aa12.74□□□□□ -0.37
DDX55-203ENST00000421670 AGMATQ9BSE5 352 aa12.74□□□□□ -0.37
DDX55-203ENST00000421670 OR2D2Q9H210 308 aa12.74□□□□□ -0.37
DDX55-203ENST00000421670 MCUBQ9NWR8 336 aa12.74□□□□□ -0.37
DDX55-203ENST00000421670 RBM7Q9Y580 266 aaKnown RBP12.74□□□□□ -0.37
DDX55-203ENST00000421670 SAA2-SAA4A0A096LPE2 208 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 A0A0U1RQK1 487 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 UPK1BO75841 260 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 ZNF735P0CB33 412 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 SAA2P0DJI9 122 aaPredicted RBP12.73□□□□□ -0.37
DDX55-203ENST00000421670 HTR1DP28221 377 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 DIAPH2-AS1Q14236 149 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 MEF2DQ14814 521 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 SCGB2B2Q4G0G5 96 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 MIDNQ504T8 468 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 ODF3L1Q8IXM7 274 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 ARRDC1Q8N5I2 433 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 OR6F1Q8NGZ6 308 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 GIMAP1Q8WWP7 306 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 CREB3L1Q96BA8 519 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 AJUBAQ96IF1 538 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 BEX2Q9BXY8 128 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 MS4A7Q9GZW8 240 aaPredicted RBP12.73□□□□□ -0.37
DDX55-203ENST00000421670 FXYD6Q9H0Q3 95 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 HRASLSQ9HDD0 168 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 AMMECR1Q9Y4X0 333 aaPredicted RBP12.73□□□□□ -0.37
DDX55-203ENST00000421670 ITGB1BP1O14713 200 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 REG1BP48304 166 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 RAB7AP51149 207 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 LUMP51884 338 aaPredicted RBP12.73□□□□□ -0.37
DDX55-203ENST00000421670 HERV-K104P61576 105 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 DHRS11Q6UWP2 260 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 DYNAPQ8N1N2 210 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 TEX29Q8N6K0 151 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 OR51S1Q8NGJ8 323 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 SECTM1Q8WVN6 248 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 TOMM40LQ969M1 308 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 CDC42EP3Q9UKI2 254 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 TBL2Q9Y4P3 447 aaKnown RBP12.73□□□□□ -0.37
DDX55-203ENST00000421670 HILPDAQ9Y5L2 63 aa12.73□□□□□ -0.37
DDX55-203ENST00000421670 MDFIC2A0A1B0GVS7 189 aa12.72□□□□□ -0.37
DDX55-203ENST00000421670 OR5H14A6NHG9 310 aa12.72□□□□□ -0.37
DDX55-203ENST00000421670 FAUP35544 74 aaKnown RBP12.72□□□□□ -0.37
DDX55-203ENST00000421670 IFITM3Q01628 133 aa12.72□□□□□ -0.37
DDX55-203ENST00000421670 SSX2Q16385 188 aa12.72□□□□□ -0.37
DDX55-203ENST00000421670 PLA1AQ53H76 456 aa12.72□□□□□ -0.37
DDX55-203ENST00000421670 RPL39P5Q59GN2 51 aa12.72□□□□□ -0.37
DDX55-203ENST00000421670 AADACL3Q5VUY0 350 aa12.72□□□□□ -0.37
DDX55-203ENST00000421670 MOB3AQ96BX8 217 aa12.72□□□□□ -0.37
DDX55-203ENST00000421670 C5orf30Q96GV9 206 aa12.72□□□□□ -0.37
DDX55-203ENST00000421670 DPM3Q9P2X0 92 aa12.72□□□□□ -0.37
DDX55-203ENST00000421670 NF1P21359 2839 aa12.71□□□□□ -0.37
DDX55-203ENST00000421670 LEUTXA8MZ59 168 aa12.71□□□□□ -0.37
DDX55-203ENST00000421670 DISC1C4P0D8 188 aa12.71□□□□□ -0.37
DDX55-203ENST00000421670 LY6LH3BQJ8 138 aa12.71□□□□□ -0.37
DDX55-203ENST00000421670 HSD17B6O14756 317 aa12.71□□□□□ -0.37
DDX55-203ENST00000421670 GPR12P47775 334 aa12.71□□□□□ -0.37
DDX55-203ENST00000421670 TPTE2P1Q5T6R2 138 aa12.71□□□□□ -0.37
DDX55-203ENST00000421670 MINOS1Q5TGZ0 78 aa12.71□□□□□ -0.37
DDX55-203ENST00000421670 LHFPL1Q86WI0 220 aa12.71□□□□□ -0.37
DDX55-203ENST00000421670 MRGPRFQ96AM1 343 aa12.71□□□□□ -0.37
DDX55-203ENST00000421670 MINOS1-NBL1R4GNA1 71 aa12.71□□□□□ -0.37
DDX55-203ENST00000421670 RAB29O14966 203 aa12.7□□□□□ -0.38
DDX55-203ENST00000421670 PLA2G10O15496 165 aa12.7□□□□□ -0.38
DDX55-203ENST00000421670 SRD5A1P18405 259 aa12.7□□□□□ -0.38
DDX55-203ENST00000421670 IL3RAP26951 378 aa12.7□□□□□ -0.38
DDX55-203ENST00000421670 CEACAM3P40198 252 aa12.7□□□□□ -0.38
DDX55-203ENST00000421670 ZNF137PP52743 207 aa12.7□□□□□ -0.38
DDX55-203ENST00000421670 BPIFB3P59826 476 aa12.7□□□□□ -0.38
DDX55-203ENST00000421670 BAMBIQ13145 260 aa12.7□□□□□ -0.38
DDX55-203ENST00000421670 IDO2Q6ZQW0 420 aa12.7□□□□□ -0.38
DDX55-203ENST00000421670 C9orf139Q6ZV77 190 aa12.7□□□□□ -0.38
DDX55-203ENST00000421670 ST6GALNAC6Q969X2 333 aa12.7□□□□□ -0.38
DDX55-203ENST00000421670 RPEQ96AT9 228 aa12.7□□□□□ -0.38
DDX55-203ENST00000421670 ZNF251Q9BRH9 671 aa12.7□□□□□ -0.38
DDX55-203ENST00000421670 SLC5A7Q9GZV3 580 aa12.7□□□□□ -0.38
DDX55-203ENST00000421670 PIPOXQ9P0Z9 390 aa12.7□□□□□ -0.38
DDX55-203ENST00000421670 ZNF221Q9UK13 617 aa12.7□□□□□ -0.38
DDX55-203ENST00000421670 TBC1D24Q9ULP9 559 aa12.7□□□□□ -0.38
DDX55-203ENST00000421670 IGLV2-14P01704 120 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 DEFB112Q30KQ8 113 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 ZNF833PQ6ZTB9 187 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 ZNF645Q8N7E2 425 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 RTN4IP1Q8WWV3 396 aaPredicted RBP12.69□□□□□ -0.38
DDX55-203ENST00000421670 DEDD2Q8WXF8 326 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 PRRT1Q99946 306 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 CCL28Q9NRJ3 127 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 SDHAF2Q9NX18 166 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 SLC2A8Q9NY64 477 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 FAM96BQ9Y3D0 163 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 SETD2Q9BYW2 2564 aaPredicted RBP12.69□□□□□ -0.38
DDX55-203ENST00000421670 PROP1O75360 226 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 FBP1P09467 338 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 BTCP35070 178 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 CCR6P51684 374 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms