RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 FOSL1P15407 271 aa11.68□□□□□ -0.54
SHMT1P1-201ENST00000419974 CCL3L1P16619 93 aa11.68□□□□□ -0.54
SHMT1P1-201ENST00000419974 ZNF134P52741 427 aa11.68□□□□□ -0.54
SHMT1P1-201ENST00000419974 FXYD4P59646 89 aa11.68□□□□□ -0.54
SHMT1P1-201ENST00000419974 LOXL1Q08397 574 aaPredicted RBP11.68□□□□□ -0.54
SHMT1P1-201ENST00000419974 CT45A1Q5HYN5 189 aa11.68□□□□□ -0.54
SHMT1P1-201ENST00000419974 TMED4Q7Z7H5 227 aa11.68□□□□□ -0.54
SHMT1P1-201ENST00000419974 SGPP2Q8IWX5 399 aa11.68□□□□□ -0.54
SHMT1P1-201ENST00000419974 ADAD2Q8NCV1 583 aaKnown RBP11.68□□□□□ -0.54
SHMT1P1-201ENST00000419974 CT45A3Q8NHU0 189 aa11.68□□□□□ -0.54
SHMT1P1-201ENST00000419974 ASB13Q8WXK3 278 aa11.68□□□□□ -0.54
SHMT1P1-201ENST00000419974 TOMM40LQ969M1 308 aa11.68□□□□□ -0.54
SHMT1P1-201ENST00000419974 IFI27L2Q9H2X8 130 aa11.68□□□□□ -0.54
SHMT1P1-201ENST00000419974 OR51J1Q9H342 316 aa11.68□□□□□ -0.54
SHMT1P1-201ENST00000419974 METTL8Q9H825 291 aaKnown RBP11.68□□□□□ -0.54
SHMT1P1-201ENST00000419974 PIPOXQ9P0Z9 390 aa11.68□□□□□ -0.54
SHMT1P1-201ENST00000419974 KCNIP3Q9Y2W7 256 aa11.68□□□□□ -0.54
SHMT1P1-201ENST00000419974 IGHV2-70DA0A0C4DH43 119 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 DBX1A6NMT0 343 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 RAB29O14966 203 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 PHF1O43189 567 aaPredicted RBP11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 PGLYRP1O75594 196 aaPredicted RBP11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 MMP23AO75900 390 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 OR8U9P0C7N5 309 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 ANXA3P12429 323 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 USF1P22415 310 aaPredicted RBP11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 OMGP23515 440 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 PRTN3P24158 256 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 ZFP36P26651 326 aaKnown RBP11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 RAB25P57735 213 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 ERVFRD-1P60508 538 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 RRAS2P62070 204 aaPredicted RBP11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 BAMBIQ13145 260 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 PPP1R1AQ13522 171 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 ABCA11PQ4W5N1 156 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 C4orf46Q504U0 113 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 PRAMEF5Q5TYX0 476 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 ZNF66Q6ZN08 573 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 DRAM1Q8N682 238 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 BEND2Q8NDZ0 799 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 OR8U1Q8NH10 309 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 OR9G1Q8NH87 305 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 SECTM1Q8WVN6 248 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 CAPSLQ8WWF8 208 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 ABHD14AQ9BUJ0 271 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 SUCNR1Q9BXA5 334 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 PARP12Q9H0J9 701 aaKnown RBP11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 TMEM133Q9H2Q1 129 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 NAA60Q9H7X0 242 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 CCL28Q9NRJ3 127 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 PSG11Q9UQ72 335 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 C2CD3Q4AC94 2353 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 MALRD1Q5VYJ5 2156 aa11.67□□□□□ -0.54
SHMT1P1-201ENST00000419974 IGLV1-47P01700 117 aa11.66□□□□□ -0.54
SHMT1P1-201ENST00000419974 HLA-AP01891 365 aaKnown RBP11.66□□□□□ -0.54
SHMT1P1-201ENST00000419974 AKR1C4P17516 323 aa11.66□□□□□ -0.54
SHMT1P1-201ENST00000419974 GATA3P23771 443 aa11.66□□□□□ -0.54
SHMT1P1-201ENST00000419974 F2RP25116 425 aa11.66□□□□□ -0.54
SHMT1P1-201ENST00000419974 SRPXP78539 464 aa11.66□□□□□ -0.54
SHMT1P1-201ENST00000419974 Q8N7P7 452 aa11.66□□□□□ -0.54
SHMT1P1-201ENST00000419974 OR11H6Q8NGC7 330 aa11.66□□□□□ -0.54
SHMT1P1-201ENST00000419974 UBALD1Q8TB05 177 aa11.66□□□□□ -0.54
SHMT1P1-201ENST00000419974 IL22RA2Q969J5 263 aa11.66□□□□□ -0.54
SHMT1P1-201ENST00000419974 PPP1R14BQ96C90 147 aa11.66□□□□□ -0.54
SHMT1P1-201ENST00000419974 PHB2Q99623 299 aa11.66□□□□□ -0.54
SHMT1P1-201ENST00000419974 HSD17B10Q99714 261 aaKnown RBP11.66□□□□□ -0.54
SHMT1P1-201ENST00000419974 RNF212BA8MTL3 300 aa11.65□□□□□ -0.54
SHMT1P1-201ENST00000419974 H0Y980 276 aa11.65□□□□□ -0.54
SHMT1P1-201ENST00000419974 J3QR06 171 aa11.65□□□□□ -0.54
SHMT1P1-201ENST00000419974 PROP1O75360 226 aa11.65□□□□□ -0.54
SHMT1P1-201ENST00000419974 IFNA2P01563 188 aa11.65□□□□□ -0.54
SHMT1P1-201ENST00000419974 SULT1A3P0DMM9 295 aa11.65□□□□□ -0.54
SHMT1P1-201ENST00000419974 SULT1A4P0DMN0 295 aa11.65□□□□□ -0.54
SHMT1P1-201ENST00000419974 ODF3L1Q8IXM7 274 aa11.65□□□□□ -0.54
SHMT1P1-201ENST00000419974 C12orf45Q8N5I9 185 aaPredicted RBP11.65□□□□□ -0.54
SHMT1P1-201ENST00000419974 TMEM56Q96MV1 263 aa11.65□□□□□ -0.54
SHMT1P1-201ENST00000419974 ZNF251Q9BRH9 671 aa11.65□□□□□ -0.54
SHMT1P1-201ENST00000419974 SEC22CQ9BRL7 303 aa11.65□□□□□ -0.54
SHMT1P1-201ENST00000419974 OR2D2Q9H210 308 aa11.65□□□□□ -0.54
SHMT1P1-201ENST00000419974 SDHAF2Q9NX18 166 aa11.65□□□□□ -0.54
SHMT1P1-201ENST00000419974 RBM7Q9Y580 266 aaKnown RBP11.65□□□□□ -0.54
SHMT1P1-201ENST00000419974 TMEM56-RWDD3S4R434 201 aa11.65□□□□□ -0.54
SHMT1P1-201ENST00000419974 ACANP16112 2415 aa11.65□□□□□ -0.54
SHMT1P1-201ENST00000419974 IGHV3-43A0A0B4J1X8 118 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 TEX13DA0A0J9YY54 714 aaPredicted RBP11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 C3orf85A0A1B0GTC6 90 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 DUXBA0A1W2PPF3 345 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 B4DSR2 109 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 CDS2O95674 445 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 IGHV3-43DP0DP04 118 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 MMP9P14780 707 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 RPA2P15927 270 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 PI3P19957 117 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 UCP1P25874 307 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 TAGLNQ01995 201 aaKnown RBP11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 PAX8Q06710 450 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 SRSF4Q08170 494 aaKnown RBP11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 TMEM187Q14656 261 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 ZNF833PQ6ZTB9 187 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 TBC1D26Q86UD7 250 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms