RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 IGLV2-14P01704 120 aa12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 IGHEP01854 428 aa12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 ARR3P36575 388 aa12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 SERF2P84101 59 aa12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 PMP22Q01453 160 aa12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 ZNF816Q0VGE8 651 aaPredicted RBP12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 RTP5Q14D33 572 aa12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 NRN1LQ496H8 165 aa12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 C16orf82Q7Z2V1 217 aa12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 NUFIP2Q7Z417 695 aaKnown RBP12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 RPP25LQ8N5L8 163 aaKnown RBP12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 TMEM105Q8N8V8 129 aa12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 OR10A7Q8NGE5 316 aa12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 LSM10Q969L4 123 aaKnown RBP12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 PSMG3Q9BT73 122 aaPredicted RBP12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 B4GALT7Q9UBV7 327 aa12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 OR2H2O95918 312 aa12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 SLC25A6P12236 298 aa12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 SPINK9Q5DT21 86 aa12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 ABHD17BQ5VST6 288 aa12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 DRAM1Q8N682 238 aa12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 HIST1H2BLQ99880 126 aa12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 PRSS50Q9UI38 385 aa12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 MED13Q9UHV7 2174 aa12.84□□□□□ -0.35
SEMA3B-203ENST00000419007 IGKV3D-15A0A087WSY6 115 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 OR5B21A6NL26 309 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 M0R296 226 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 PHOX2AO14813 284 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 NXPH2O95156 264 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 IGKV1D-33P01593 117 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 IGKV1-33P01594 117 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 DEFA4P12838 97 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 CEBPDP49716 269 aaPredicted RBP12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 RND2P52198 227 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 CLDN18P56856 261 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 MEF2BQ02080 365 aaPredicted RBP12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 TMEM241Q24JQ0 296 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 FAM53AQ6NSI3 398 aaPredicted RBP12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 C6orf15Q6UXA7 325 aaPredicted RBP12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 OR4F5Q8NH21 305 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 OR4X1Q8NH49 305 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 GATAD1Q8WUU5 269 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 OR4F4Q96R69 305 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 LINC00470Q9BZP3 86 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 CLN8Q9UBY8 286 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 MPC1Q9Y5U8 109 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 PRR14LQ5THK1 2151 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 PIGBOS1A0A0B4J2F0 54 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 A0A1W2PPQ1 181 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 MT-CO3P00414 261 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 BMP5P22003 454 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 G6PCP35575 357 aa12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 RNPS1Q15287 305 aaKnown RBP12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 GTF3AQ92664 365 aaKnown RBP12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 ZNF703Q9H7S9 590 aaPredicted RBP12.83□□□□□ -0.36
SEMA3B-203ENST00000419007 TSTD3H0UI37 97 aa12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 CDIPTO14735 213 aa12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 GRPP07492 148 aa12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 UNQ6494/PRO21346Q6UXR6 183 aa12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 PINX1Q96BK5 328 aaKnown RBP12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 OR5B12Q96R08 314 aa12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 FAM173AQ9BQD7 235 aa12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 NAT8Q9UHE5 227 aa12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 ZFHX2Q9C0A1 2572 aaPredicted RBP12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 H7BYZ3 331 aa12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 RAMP3O60896 148 aa12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 PSMB3P49720 205 aa12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 IDH3GP51553 393 aaPredicted RBP12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 CD81P60033 236 aa12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 SSPNQ14714 243 aa12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 BSXQ3C1V8 233 aa12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 SSX9Q7RTT3 188 aa12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 LINC00596Q86U02 117 aa12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 C14orf144Q96I85 54 aa12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 P2RX4Q99571 388 aa12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 TMEM242Q9NWH2 141 aa12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 LOXL2Q9Y4K0 774 aa12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 NEURL1O76050 574 aa12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 GPR87Q9BY21 358 aa12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 OR51I2Q9H344 312 aa12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 PITPNC1Q9UKF7 332 aa12.82□□□□□ -0.36
SEMA3B-203ENST00000419007 TRBV24-1A0A075B6N3 115 aa12.81□□□□□ -0.36
SEMA3B-203ENST00000419007 A0A087X0M5 115 aa12.81□□□□□ -0.36
SEMA3B-203ENST00000419007 A0A1B0GX30 115 aa12.81□□□□□ -0.36
SEMA3B-203ENST00000419007 J3QT63 122 aa12.81□□□□□ -0.36
SEMA3B-203ENST00000419007 COX5BP10606 129 aa12.81□□□□□ -0.36
SEMA3B-203ENST00000419007 IL2RGP31785 369 aa12.81□□□□□ -0.36
SEMA3B-203ENST00000419007 HOXA4Q00056 320 aaPredicted RBP12.81□□□□□ -0.36
SEMA3B-203ENST00000419007 COL10A1Q03692 680 aa12.81□□□□□ -0.36
SEMA3B-203ENST00000419007 ELOVL1Q9BW60 279 aa12.81□□□□□ -0.36
SEMA3B-203ENST00000419007 HIPK2Q9H2X6 1198 aa12.81□□□□□ -0.36
SEMA3B-203ENST00000419007 LRP5LA4QPB2 252 aa12.81□□□□□ -0.36
SEMA3B-203ENST00000419007 ZNF705GA8MUZ8 300 aaPredicted RBP12.81□□□□□ -0.36
SEMA3B-203ENST00000419007 PPP5D1E7EU14 171 aa12.81□□□□□ -0.36
SEMA3B-203ENST00000419007 GALR1P47211 349 aa12.81□□□□□ -0.36
SEMA3B-203ENST00000419007 Q6P435 159 aa12.81□□□□□ -0.36
SEMA3B-203ENST00000419007 ACSM6Q6P461 480 aa12.81□□□□□ -0.36
SEMA3B-203ENST00000419007 ZNF66Q6ZN08 573 aa12.81□□□□□ -0.36
SEMA3B-203ENST00000419007 CXorf67Q86X51 503 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms