RNA–Protein interactions for RNA: ENST00000418006.1

LINC00940-201, long intergenic non-protein coding RNA 940, humanhuman

TSL 2 BASIC

Gene LINC00940, Length 2,350 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00940-201ENST00000418006 ERVS71-1P61550 626 aa11.75□□□□□ -0.53
LINC00940-201ENST00000418006 PNRC1Q12796 327 aaPredicted RBP11.75□□□□□ -0.53
LINC00940-201ENST00000418006 TBC1D28Q2M2D7 210 aa11.75□□□□□ -0.53
LINC00940-201ENST00000418006 C17orf78Q8N4C9 275 aa11.75□□□□□ -0.53
LINC00940-201ENST00000418006 TMEM252Q8N6L7 170 aa11.75□□□□□ -0.53
LINC00940-201ENST00000418006 ZNF611Q8N823 705 aa11.75□□□□□ -0.53
LINC00940-201ENST00000418006 OR10A7Q8NGE5 316 aa11.75□□□□□ -0.53
LINC00940-201ENST00000418006 GNPNAT1Q96EK6 184 aaPredicted RBP11.75□□□□□ -0.53
LINC00940-201ENST00000418006 Q96M66 194 aa11.75□□□□□ -0.53
LINC00940-201ENST00000418006 SNHG12Q9BXW3 62 aa11.75□□□□□ -0.53
LINC00940-201ENST00000418006 IGHV3-64DA0A0J9YX35 117 aa11.74□□□□□ -0.53
LINC00940-201ENST00000418006 SSSCA1O60232 199 aa11.74□□□□□ -0.53
LINC00940-201ENST00000418006 DFFBO76075 338 aa11.74□□□□□ -0.53
LINC00940-201ENST00000418006 CST7O76096 145 aa11.74□□□□□ -0.53
LINC00940-201ENST00000418006 NPBWR2P48146 333 aa11.74□□□□□ -0.53
LINC00940-201ENST00000418006 COL10A1Q03692 680 aa11.74□□□□□ -0.53
LINC00940-201ENST00000418006 GABRA6Q16445 453 aa11.74□□□□□ -0.53
LINC00940-201ENST00000418006 DYRK2Q92630 601 aa11.74□□□□□ -0.53
LINC00940-201ENST00000418006 TP53RKQ96S44 253 aa11.74□□□□□ -0.53
LINC00940-201ENST00000418006 SYT3Q9BQG1 590 aa11.74□□□□□ -0.53
LINC00940-201ENST00000418006 LYRM2Q9NU23 88 aaPredicted RBP11.74□□□□□ -0.53
LINC00940-201ENST00000418006 GNG13Q9P2W3 67 aa11.74□□□□□ -0.53
LINC00940-201ENST00000418006 SMG1Q96Q15 3661 aaKnown RBP11.74□□□□□ -0.53
LINC00940-201ENST00000418006 CD300LBA8K4G0 201 aa11.74□□□□□ -0.53
LINC00940-201ENST00000418006 C3orf80F5H4A9 247 aa11.74□□□□□ -0.53
LINC00940-201ENST00000418006 GCGP01275 180 aa11.74□□□□□ -0.53
LINC00940-201ENST00000418006 OPN1MWP04001 364 aa11.74□□□□□ -0.53
LINC00940-201ENST00000418006 OPN1MW2P0DN77 364 aa11.74□□□□□ -0.53
LINC00940-201ENST00000418006 OPN1MW3P0DN78 364 aa11.74□□□□□ -0.53
LINC00940-201ENST00000418006 NKX2-1P43699 371 aaPredicted RBP11.74□□□□□ -0.53
LINC00940-201ENST00000418006 GUSBP1Q15486 140 aa11.74□□□□□ -0.53
LINC00940-201ENST00000418006 SEM1Q6ZVN7 128 aa11.74□□□□□ -0.53
LINC00940-201ENST00000418006 CXorf67Q86X51 503 aaPredicted RBP11.74□□□□□ -0.53
LINC00940-201ENST00000418006 ODF3L1Q8IXM7 274 aa11.74□□□□□ -0.53
LINC00940-201ENST00000418006 ZDHHC23Q8IYP9 409 aa11.74□□□□□ -0.53
LINC00940-201ENST00000418006 TMEM217Q8N7C4 229 aa11.74□□□□□ -0.53
LINC00940-201ENST00000418006 MAGT1Q9H0U3 335 aa11.74□□□□□ -0.53
LINC00940-201ENST00000418006 FGF23Q9GZV9 251 aaPredicted RBP11.73□□□□□ -0.53
LINC00940-201ENST00000418006 HIPK2Q9H2X6 1198 aa11.73□□□□□ -0.53
LINC00940-201ENST00000418006 PROCRQ9UNN8 238 aa11.73□□□□□ -0.53
LINC00940-201ENST00000418006 ST3GAL6Q9Y274 331 aa11.73□□□□□ -0.53
LINC00940-201ENST00000418006 NBEAQ8NFP9 2946 aa11.73□□□□□ -0.53
LINC00940-201ENST00000418006 XKRY2A2RUG3 117 aa11.72□□□□□ -0.53
LINC00940-201ENST00000418006 TNFSF13O75888 250 aa11.72□□□□□ -0.53
LINC00940-201ENST00000418006 CDS2O95674 445 aa11.72□□□□□ -0.53
LINC00940-201ENST00000418006 CA6P23280 308 aa11.72□□□□□ -0.53
LINC00940-201ENST00000418006 FAM180AQ6UWF9 173 aa11.72□□□□□ -0.53
LINC00940-201ENST00000418006 OSR2Q8N2R0 312 aa11.72□□□□□ -0.53
LINC00940-201ENST00000418006 CISD2Q8N5K1 135 aaKnown RBP11.72□□□□□ -0.53
LINC00940-201ENST00000418006 STARD4Q96DR4 205 aa11.72□□□□□ -0.53
LINC00940-201ENST00000418006 HIST1H2AAQ96QV6 131 aa11.72□□□□□ -0.53
LINC00940-201ENST00000418006 OR2J1Q9GZK6 312 aa11.72□□□□□ -0.53
LINC00940-201ENST00000418006 SRD5A3Q9H8P0 318 aa11.72□□□□□ -0.53
LINC00940-201ENST00000418006 SDF2L1Q9HCN8 221 aa11.72□□□□□ -0.53
LINC00940-201ENST00000418006 SH3BGRL2Q9UJC5 107 aa11.72□□□□□ -0.53
LINC00940-201ENST00000418006 TRDCB7Z8K6 153 aa11.72□□□□□ -0.53
LINC00940-201ENST00000418006 CRYABP02511 175 aaKnown RBP11.72□□□□□ -0.53
LINC00940-201ENST00000418006 DTYMKP23919 212 aa11.72□□□□□ -0.53
LINC00940-201ENST00000418006 VAMP2P63027 116 aa11.72□□□□□ -0.53
LINC00940-201ENST00000418006 CXorf66Q5JRM2 361 aaPredicted RBP11.72□□□□□ -0.53
LINC00940-201ENST00000418006 DPPA3Q6W0C5 159 aa11.72□□□□□ -0.53
LINC00940-201ENST00000418006 GAB2Q9UQC2 676 aa11.72□□□□□ -0.53
LINC00940-201ENST00000418006 RELNP78509 3460 aa11.72□□□□□ -0.53
LINC00940-201ENST00000418006 ADGRG4Q8IZF6 3080 aa11.72□□□□□ -0.53
LINC00940-201ENST00000418006 ZFP92A6NM28 416 aa11.71□□□□□ -0.53
LINC00940-201ENST00000418006 ANKRD30BLA7E2S9 258 aa11.71□□□□□ -0.53
LINC00940-201ENST00000418006 WDR1O75083 606 aa11.71□□□□□ -0.53
LINC00940-201ENST00000418006 TK1P04183 234 aa11.71□□□□□ -0.53
LINC00940-201ENST00000418006 CD55P08174 381 aa11.71□□□□□ -0.53
LINC00940-201ENST00000418006 OR4A8P0C604 315 aa11.71□□□□□ -0.53
LINC00940-201ENST00000418006 P2RY6Q15077 328 aa11.71□□□□□ -0.53
LINC00940-201ENST00000418006 MPV17LQ2QL34 196 aa11.71□□□□□ -0.53
LINC00940-201ENST00000418006 COA6Q5JTJ3 125 aaKnown RBP11.71□□□□□ -0.53
LINC00940-201ENST00000418006 CCDC71LQ8N9Z2 235 aa11.71□□□□□ -0.53
LINC00940-201ENST00000418006 MOB3AQ96BX8 217 aa11.71□□□□□ -0.53
LINC00940-201ENST00000418006 CISD1Q9NZ45 108 aaKnown RBP11.71□□□□□ -0.53
LINC00940-201ENST00000418006 SHANK1Q9Y566 2161 aa11.71□□□□□ -0.53
LINC00940-201ENST00000418006 TRAV1-1A0A0B4J248 108 aa11.71□□□□□ -0.54
LINC00940-201ENST00000418006 C3orf85A0A1B0GTC6 90 aa11.71□□□□□ -0.54
LINC00940-201ENST00000418006 MMP9P14780 707 aa11.71□□□□□ -0.54
LINC00940-201ENST00000418006 BCL3P20749 454 aa11.71□□□□□ -0.54
LINC00940-201ENST00000418006 MRPL49Q13405 166 aaKnown RBP11.71□□□□□ -0.54
LINC00940-201ENST00000418006 CEACAM21Q3KPI0 293 aa11.71□□□□□ -0.54
LINC00940-201ENST00000418006 CTDSP1Q9GZU7 261 aa11.71□□□□□ -0.54
LINC00940-201ENST00000418006 PLSCR4Q9NRQ2 329 aa11.71□□□□□ -0.54
LINC00940-201ENST00000418006 FZR1Q9UM11 496 aa11.71□□□□□ -0.54
LINC00940-201ENST00000418006 FAM215AQ9Y5M1 114 aa11.71□□□□□ -0.54
LINC00940-201ENST00000418006 KALRNO60229 2985 aa11.7□□□□□ -0.54
LINC00940-201ENST00000418006 SLC33A1O00400 549 aaPredicted RBP11.7□□□□□ -0.54
LINC00940-201ENST00000418006 HSPB6O14558 160 aa11.7□□□□□ -0.54
LINC00940-201ENST00000418006 SOX15O60248 233 aa11.7□□□□□ -0.54
LINC00940-201ENST00000418006 SMPD2O60906 423 aa11.7□□□□□ -0.54
LINC00940-201ENST00000418006 OR7C1O76099 320 aaPredicted RBP11.7□□□□□ -0.54
LINC00940-201ENST00000418006 TMEM50AO95807 157 aa11.7□□□□□ -0.54
LINC00940-201ENST00000418006 BCL2P10415 239 aa11.7□□□□□ -0.54
LINC00940-201ENST00000418006 ZNF25P17030 456 aaPredicted RBP11.7□□□□□ -0.54
LINC00940-201ENST00000418006 UCP3P55916 312 aa11.7□□□□□ -0.54
LINC00940-201ENST00000418006 TAS2R30P59541 319 aa11.7□□□□□ -0.54
LINC00940-201ENST00000418006 PPP1CBP62140 327 aa11.7□□□□□ -0.54
LINC00940-201ENST00000418006 ZNF154Q13106 437 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms