RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 OR2W1Q9Y3N9 320 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 HILPDAQ9Y5L2 63 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 MINOS1-NBL1R4GNA1 71 aa6.9□□□□□ -1.31
TRIM48-201ENST00000417545 SETXQ7Z333 2677 aaKnown RBP6.9□□□□□ -1.31
TRIM48-201ENST00000417545 NAP1L6A6NFF2 107 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 BUB1B-PAK6H3BSN5 160 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 HSD17B6O14756 317 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 SLC31A2O15432 143 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 TXNL1O43396 289 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 LANCL1O43813 399 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 ECI1P42126 302 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 LSAMPQ13449 338 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 SSX2Q16385 188 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 BAK1Q16611 211 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 LY6G6FQ5SQ64 297 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 VAX1Q5SQQ9 334 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 FAM53AQ6NSI3 398 aaPredicted RBP6.89□□□□□ -1.31
TRIM48-201ENST00000417545 FAAP20Q6NZ36 180 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 MZT2BQ6NZ67 158 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 LPCAT3Q6P1A2 487 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 SLC25A48Q6ZT89 311 aaKnown RBP6.89□□□□□ -1.31
TRIM48-201ENST00000417545 OVCH2Q7RTZ1 564 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 MOB3BQ86TA1 216 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 TGIF2LXQ8IUE1 241 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 LINC00311Q8N616 119 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 C8orf31Q8N9H6 132 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 OR4C16Q8NGL9 310 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 OR56B4Q8NH76 319 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 FAM216AQ8WUB2 273 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 DEDD2Q8WXF8 326 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 TRIM63Q969Q1 353 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 ABHD14BQ96IU4 210 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 SLC6A7Q99884 636 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 C7orf50Q9BRJ6 194 aaKnown RBP6.89□□□□□ -1.31
TRIM48-201ENST00000417545 C11orf54Q9H0W9 315 aaPredicted RBP6.89□□□□□ -1.31
TRIM48-201ENST00000417545 C14orf166Q9Y224 244 aaKnown RBP6.89□□□□□ -1.31
TRIM48-201ENST00000417545 RBMX2Q9Y388 322 aaKnown RBP6.89□□□□□ -1.31
TRIM48-201ENST00000417545 CSMD1Q96PZ7 3565 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 FLNAP21333 2647 aaKnown RBP6.89□□□□□ -1.31
TRIM48-201ENST00000417545 CREBBPQ92793 2442 aa6.89□□□□□ -1.31
TRIM48-201ENST00000417545 ABCA1O95477 2261 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 A0A0U1RQK1 487 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 ODF3BA8MYP8 253 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 M0R1X1 148 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 ITGB1BP1O14713 200 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 TUSC2O75896 110 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 APOA2P02652 100 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 CD74P04233 296 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 GAPDHP04406 335 aaKnown RBP6.88□□□□□ -1.31
TRIM48-201ENST00000417545 BRS3P32247 399 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 REG1BP48304 166 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 CT45A1Q5HYN5 189 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 KLF17Q5JT82 389 aaPredicted RBP6.88□□□□□ -1.31
TRIM48-201ENST00000417545 TPTE2P1Q5T6R2 138 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 HCP5Q6MZN7 132 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 LIAT1Q6ZQX7 453 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 LHFPL4Q7Z7J7 247 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 LYSMD2Q8IV50 215 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 CMTM1Q8IZ96 169 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 ZNF645Q8N7E2 425 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 OR4P4Q8NGL7 312 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 CT45A3Q8NHU0 189 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 ZFAND1Q8TCF1 268 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 ZNF418Q8TF45 676 aaPredicted RBP6.88□□□□□ -1.31
TRIM48-201ENST00000417545 CAPSLQ8WWF8 208 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 GIMAP1Q8WWP7 306 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 MALSU1Q96EH3 234 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 SCGB3A2Q96PL1 93 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 HRASLSQ9HDD0 168 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 ZNRD1Q9P1U0 126 aa6.88□□□□□ -1.31
TRIM48-201ENST00000417545 SAA2-SAA4A0A096LPE2 208 aa6.87□□□□□ -1.31
TRIM48-201ENST00000417545 RNF212BA8MTL3 300 aa6.87□□□□□ -1.31
TRIM48-201ENST00000417545 OOSP1A8MZH6 123 aa6.87□□□□□ -1.31
TRIM48-201ENST00000417545 UPK1BO75841 260 aa6.87□□□□□ -1.31
TRIM48-201ENST00000417545 IGLV1-47P01700 117 aa6.87□□□□□ -1.31
TRIM48-201ENST00000417545 SAA2P0DJI9 122 aaPredicted RBP6.87□□□□□ -1.31
TRIM48-201ENST00000417545 CATR1Q13166 79 aa6.87□□□□□ -1.31
TRIM48-201ENST00000417545 KLF9Q13886 244 aaPredicted RBP6.87□□□□□ -1.31
TRIM48-201ENST00000417545 HES1Q14469 280 aa6.87□□□□□ -1.31
TRIM48-201ENST00000417545 IDO2Q6ZQW0 420 aa6.87□□□□□ -1.31
TRIM48-201ENST00000417545 C1orf229Q6ZS94 237 aaPredicted RBP6.87□□□□□ -1.31
TRIM48-201ENST00000417545 OR8H3Q8N146 312 aa6.87□□□□□ -1.31
TRIM48-201ENST00000417545 CCDC71LQ8N9Z2 235 aa6.87□□□□□ -1.31
TRIM48-201ENST00000417545 POC5Q8NA72 575 aa6.87□□□□□ -1.31
TRIM48-201ENST00000417545 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.87□□□□□ -1.31
TRIM48-201ENST00000417545 ZNF439Q8NDP4 499 aa6.87□□□□□ -1.31
TRIM48-201ENST00000417545 OR4D10Q8NGI6 311 aa6.87□□□□□ -1.31
TRIM48-201ENST00000417545 OR51S1Q8NGJ8 323 aa6.87□□□□□ -1.31
TRIM48-201ENST00000417545 ENKURQ8TC29 256 aa6.87□□□□□ -1.31
TRIM48-201ENST00000417545 MOB3AQ96BX8 217 aa6.87□□□□□ -1.31
TRIM48-201ENST00000417545 TOLLIPQ9H0E2 274 aa6.87□□□□□ -1.31
TRIM48-201ENST00000417545 PARP12Q9H0J9 701 aaKnown RBP6.87□□□□□ -1.31
TRIM48-201ENST00000417545 FXYD6Q9H0Q3 95 aa6.87□□□□□ -1.31
TRIM48-201ENST00000417545 IFI27L2Q9H2X8 130 aa6.87□□□□□ -1.31
TRIM48-201ENST00000417545 MED13LQ71F56 2210 aa6.87□□□□□ -1.31
TRIM48-201ENST00000417545 OTOGQ6ZRI0 2925 aa6.87□□□□□ -1.31
TRIM48-201ENST00000417545 MAP1AP78559 2803 aaPredicted RBP6.86□□□□□ -1.31
TRIM48-201ENST00000417545 H7C2Y5 167 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 GPR31O00270 319 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 LYRM1O43325 122 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms