RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 PROP1O75360 226 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 RGS11O94810 467 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 NDUFA7O95182 113 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 GAPDHP04406 335 aaKnown RBP6.16□□□□□ -1.42
CPSF4-202ENST00000412686 AMY1AP04745 511 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 AMY2AP04746 511 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 ZNF182P17025 639 aaPredicted RBP6.16□□□□□ -1.42
CPSF4-202ENST00000412686 DTYMKP23919 212 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 IL3RAP26951 378 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 BRS3P32247 399 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 KIR2DS4P43632 304 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 TMBIM6P55061 237 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 LINC00205P59089 165 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 KRTAP10-3P60369 221 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 HES1Q14469 280 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 KIR2DS1Q14954 304 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 ARL6IP1Q15041 203 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 PNLIPRP3Q17RR3 467 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 RNASE12Q5GAN4 147 aaKnown RBP6.16□□□□□ -1.42
CPSF4-202ENST00000412686 LY6G6FQ5SQ64 297 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 TMEM69Q5SWH9 247 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 CCDC144NLQ6NUI1 221 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 GLDNQ6ZMI3 551 aaPredicted RBP6.16□□□□□ -1.42
CPSF4-202ENST00000412686 ZNF833PQ6ZTB9 187 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 TGIF2LXQ8IUE1 241 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 OR8H3Q8N146 312 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 DRAXINQ8NBI3 349 aaPredicted RBP6.16□□□□□ -1.42
CPSF4-202ENST00000412686 OR4A4PQ8NGN8 299 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 OR4F5Q8NH21 305 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 DYNC2LI1Q8TCX1 351 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 S100A16Q96FQ6 103 aaKnown RBP6.16□□□□□ -1.42
CPSF4-202ENST00000412686 C5orf30Q96GV9 206 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 NABP2Q9BQ15 211 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 AGMATQ9BSE5 352 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 RBM38Q9H0Z9 239 aaKnown RBP6.16□□□□□ -1.42
CPSF4-202ENST00000412686 MIXL1Q9H2W2 232 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 ZNF702PQ9H963 129 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 MGAT4AQ9UM21 535 aa6.16□□□□□ -1.42
CPSF4-202ENST00000412686 A0A0A6YYH2 397 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 CLPSL1A2RUU4 121 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 CCDC160A6NGH7 325 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 A6NJ64 397 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 FAM25AB3EWG3 89 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 FAM25CB3EWG5 89 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 FAM25GB3EWG6 89 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 CTDSP2O14595 271 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 LANCL1O43813 399 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 TSPAN9O75954 239 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 OR2F2O95006 317 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 HLA-DQB1P01920 261 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 APOA1P02647 267 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 OR8U9P0C7N5 309 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 TMEM11P17152 192 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 NFYAP23511 347 aaPredicted RBP6.15□□□□□ -1.42
CPSF4-202ENST00000412686 PROK1P58294 105 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 RPL15P61313 204 aaKnown RBP6.15□□□□□ -1.42
CPSF4-202ENST00000412686 PITPNAQ00169 270 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 LSAMPQ13449 338 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 SRSF7Q16629 238 aaKnown RBP eCLIP6.15□□□□□ -1.42
CPSF4-202ENST00000412686 Q6ZS49 121 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 SNX29P2Q8IUI4 249 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 LAX1Q8IWV1 398 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 H1FOOQ8IZA3 346 aaPredicted RBP6.15□□□□□ -1.42
CPSF4-202ENST00000412686 C3orf56Q8N813 242 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 OR8U1Q8NH10 309 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 OR10J5Q8NHC4 309 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 WFDC12Q8WWY7 111 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 ACOT12Q8WYK0 555 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 AP3S1Q92572 193 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 SNAPC3Q92966 411 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 EAF1Q96JC9 268 aaPredicted RBP6.15□□□□□ -1.42
CPSF4-202ENST00000412686 RITA1Q96K30 269 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 RBM14Q96PK6 669 aaKnown RBP6.15□□□□□ -1.42
CPSF4-202ENST00000412686 NPFFR1Q9GZQ6 430 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 EXTL2Q9UBQ6 330 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 ANXA10Q9UJ72 324 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 PITPNC1Q9UKF7 332 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 MRPS7Q9Y2R9 242 aaKnown RBP6.15□□□□□ -1.42
CPSF4-202ENST00000412686 RNF114Q9Y508 228 aa6.15□□□□□ -1.42
CPSF4-202ENST00000412686 IGKV1D-13A0A0B4J2D9 117 aa6.14□□□□□ -1.43
CPSF4-202ENST00000412686 ITGB1BP1O14713 200 aa6.14□□□□□ -1.43
CPSF4-202ENST00000412686 RAB29O14966 203 aa6.14□□□□□ -1.43
CPSF4-202ENST00000412686 NOL3O60936 208 aaKnown RBP6.14□□□□□ -1.43
CPSF4-202ENST00000412686 LPLP06858 475 aa6.14□□□□□ -1.43
CPSF4-202ENST00000412686 FAM106CPP0CH98 169 aa6.14□□□□□ -1.43
CPSF4-202ENST00000412686 CT45A6P0DMU7 189 aa6.14□□□□□ -1.43
CPSF4-202ENST00000412686 CT45A5P0DMU8 189 aa6.14□□□□□ -1.43
CPSF4-202ENST00000412686 CT45A7P0DMV0 189 aa6.14□□□□□ -1.43
CPSF4-202ENST00000412686 IGKV1-13P0DP09 117 aa6.14□□□□□ -1.43
CPSF4-202ENST00000412686 CNTFRP26992 372 aa6.14□□□□□ -1.43
CPSF4-202ENST00000412686 GPR12P47775 334 aa6.14□□□□□ -1.43
CPSF4-202ENST00000412686 ARHGDIBP52566 201 aa6.14□□□□□ -1.43
CPSF4-202ENST00000412686 F2RL1P55085 397 aa6.14□□□□□ -1.43
CPSF4-202ENST00000412686 EBI3Q14213 229 aa6.14□□□□□ -1.43
CPSF4-202ENST00000412686 ABCA11PQ4W5N1 156 aa6.14□□□□□ -1.43
CPSF4-202ENST00000412686 MZT2AQ6P582 158 aa6.14□□□□□ -1.43
CPSF4-202ENST00000412686 FAM131AQ6UXB0 335 aa6.14□□□□□ -1.43
CPSF4-202ENST00000412686 HOGA1Q86XE5 327 aa6.14□□□□□ -1.43
CPSF4-202ENST00000412686 THNSL2Q86YJ6 484 aa6.14□□□□□ -1.43
CPSF4-202ENST00000412686 Q8N6K4 173 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms