RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 SIPA1L3O60292 1781 aaPredicted RBP9.81□□□□□ -0.84
PRPF40A-202ENST00000410080 CDKN2AP42771 156 aaKnown RBP9.81□□□□□ -0.84
PRPF40A-202ENST00000410080 HLA-DRB5Q30154 266 aa9.81□□□□□ -0.84
PRPF40A-202ENST00000410080 LHFPL5Q8TAF8 219 aa9.81□□□□□ -0.84
PRPF40A-202ENST00000410080 ZNF707Q96C28 371 aaPredicted RBP9.81□□□□□ -0.84
PRPF40A-202ENST00000410080 SLC35B3Q9H1N7 401 aa9.81□□□□□ -0.84
PRPF40A-202ENST00000410080 CST2P09228 141 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 SLC25A1P53007 311 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 CX3CL1P78423 397 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 PCOLCEQ15113 449 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 TEX30Q5JUR7 227 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 FBXW9Q5XUX1 488 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 ARRDC1Q8N5I2 433 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 OR2T10Q8NGZ9 312 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 FAM216AQ8WUB2 273 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 COPS9Q8WXC6 57 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 ZNF275Q9NSD4 429 aaPredicted RBP9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 PSG2P11465 335 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 NRN1LQ496H8 165 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 ZNF880Q6PDB4 577 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 GTSCR1Q86UQ5 136 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 NUDT16L1Q9BRJ7 211 aaKnown RBP9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 GPR61Q9BZJ8 451 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 KIF26AQ9ULI4 1882 aaPredicted RBP9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 RAB32Q13637 225 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 BPIFA4PQ86YQ2 179 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 TP53RKQ96S44 253 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 OR2H1Q9GZK4 316 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 PTPRFP10586 1907 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 LEUTXA8MZ59 168 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 GZMHP20718 246 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 IER3P46695 156 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 NUTF2P61970 127 aaKnown RBP9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 LINC01560Q8TB33 94 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 CHRNA10Q9GZZ6 450 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 C9JCJ5 164 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 ASAH1Q13510 395 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 FLRT3Q9NZU0 649 aa9.8□□□□□ -0.84
PRPF40A-202ENST00000410080 IGKV3D-20A0A0C4DH25 116 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 COX6CP09669 75 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 CALHM1Q8IU99 346 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 STPG3Q8N7X2 389 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 ANAPC16Q96DE5 110 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 RNF115Q9Y4L5 304 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 CTAG2O75638 210 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 DUX3Q96PT4 197 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 PRSS27Q9BQR3 290 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 CACNA1EQ15878 2313 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 STRCP1A6NGW2 1772 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 S1PR2O95136 353 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 SSTR5P35346 364 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 SLC35E3Q7Z769 313 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 B4E171 279 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 HLA-DRB3P79483 266 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 C2orf88Q9BSF0 95 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 DUSP15Q9H1R2 295 aaPredicted RBP9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 C11orf68Q9H3H3 251 aaKnown RBP9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 IL36RNQ9UBH0 155 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 TICRRQ7Z2Z1 1910 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 LTBRP36941 435 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 TMEM251Q8N6I4 163 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 SIGLEC7Q9Y286 467 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 DUXBA0A1W2PPF3 345 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 SMRP1Q8NCR6 262 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 HIST1H4GQ99525 98 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 BCL2L10Q9HD36 194 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 MIOXQ9UGB7 285 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 TSPAN2O60636 221 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 ZNF253O75346 499 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 TDGF1P13385 188 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 DHRS2Q13268 280 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 CBLN3Q6UW01 205 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 C1orf174Q8IYL3 243 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 FAM24BQ8N5W8 94 aa9.79□□□□□ -0.84
PRPF40A-202ENST00000410080 SNURFLB1AK76 121 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 SFT2D2O95562 160 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 CA2P00918 260 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 RIMKLAQ8IXN7 391 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 GPR82Q96P67 336 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 TMEM191AQ9H0A3 160 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 PAM16Q9Y3D7 125 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 WIPI2Q9Y4P8 454 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 IGHV3-49A0A0A0MS15 119 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 A6NDN8 102 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 TSPAN13O95857 204 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 SMIM18P0DKX4 95 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 IL13RA2Q14627 380 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 NFAM1Q8NET5 270 aaPredicted RBP9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 OR10AC1Q8NH08 325 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 ASB13Q8WXK3 278 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 PGLYRP4Q96LB8 373 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 TRAV8-7A0A075B6U6 113 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 IGHV3-35A0A0C4DH35 117 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 TMEM127O75204 238 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 INHBBP09529 407 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 LEAP2Q969E1 77 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 RBFOX3A6NFN3 312 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 HYPMO75409 117 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 COMPP49747 757 aaPredicted RBP9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 C11orf44Q8N8P7 122 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms