RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 IGKV1-13P0DP09 117 aa11.09□□□□□ -0.63
PTPRN-202ENST00000409251 OR5D13Q8NGL4 314 aa11.09□□□□□ -0.63
PTPRN-202ENST00000409251 IMMP1LQ96LU5 166 aa11.09□□□□□ -0.63
PTPRN-202ENST00000409251 ZNF488Q96MN9 340 aa11.09□□□□□ -0.63
PTPRN-202ENST00000409251 PARLQ9H300 379 aa11.09□□□□□ -0.63
PTPRN-202ENST00000409251 DEPPQ9NTK1 212 aa11.09□□□□□ -0.63
PTPRN-202ENST00000409251 LYRM2Q9NU23 88 aaPredicted RBP11.09□□□□□ -0.63
PTPRN-202ENST00000409251 CADP27708 2225 aa11.09□□□□□ -0.63
PTPRN-202ENST00000409251 NRASP01111 189 aa11.08□□□□□ -0.64
PTPRN-202ENST00000409251 PSG2P11465 335 aa11.08□□□□□ -0.64
PTPRN-202ENST00000409251 HINT1P49773 126 aaPredicted RBP11.08□□□□□ -0.64
PTPRN-202ENST00000409251 LBHQ53QV2 105 aaPredicted RBP11.08□□□□□ -0.64
PTPRN-202ENST00000409251 EXTL1Q92935 676 aa11.08□□□□□ -0.64
PTPRN-202ENST00000409251 CCNL2Q96S94 520 aaPredicted RBP11.08□□□□□ -0.64
PTPRN-202ENST00000409251 TMEM9BQ9NQ34 198 aa11.08□□□□□ -0.64
PTPRN-202ENST00000409251 A0A087WWC5 75 aa11.08□□□□□ -0.64
PTPRN-202ENST00000409251 A0A0J9YW62 118 aa11.08□□□□□ -0.64
PTPRN-202ENST00000409251 CMTM2Q8TAZ6 248 aa11.08□□□□□ -0.64
PTPRN-202ENST00000409251 ST8SIA1Q92185 356 aa11.08□□□□□ -0.64
PTPRN-202ENST00000409251 YPEL4Q96NS1 127 aa11.08□□□□□ -0.64
PTPRN-202ENST00000409251 SRD5A3Q9H8P0 318 aa11.08□□□□□ -0.64
PTPRN-202ENST00000409251 KIAA1324LA8MWY0 1029 aaPredicted RBP11.08□□□□□ -0.64
PTPRN-202ENST00000409251 KRASP01116 189 aa11.08□□□□□ -0.64
PTPRN-202ENST00000409251 CBLN1P23435 193 aa11.08□□□□□ -0.64
PTPRN-202ENST00000409251 GJC3Q8NFK1 279 aa11.08□□□□□ -0.64
PTPRN-202ENST00000409251 ADGRG7Q96K78 797 aa11.08□□□□□ -0.64
PTPRN-202ENST00000409251 SIGLEC12Q96PQ1 595 aa11.08□□□□□ -0.64
PTPRN-202ENST00000409251 CIB3Q96Q77 187 aaPredicted RBP11.08□□□□□ -0.64
PTPRN-202ENST00000409251 VPS25Q9BRG1 176 aa11.08□□□□□ -0.64
PTPRN-202ENST00000409251 MDH2P40926 338 aaKnown RBP11.07□□□□□ -0.64
PTPRN-202ENST00000409251 LTC4SQ16873 150 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 ZNF808Q8N4W9 903 aaPredicted RBP11.07□□□□□ -0.64
PTPRN-202ENST00000409251 WNT10AQ9GZT5 417 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 B3GAT1Q9P2W7 334 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 VAX2Q9UIW0 290 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 A0A0G2JRQ6 117 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 GCGP01275 180 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 GYPAP02724 150 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 MSR1P21757 451 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 CD82P27701 267 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 S100GP29377 79 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 CYB561P49447 251 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 TCL1AP56279 114 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 PLGLB1Q02325 96 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 TRIP6Q15654 476 aaKnown RBP11.07□□□□□ -0.64
PTPRN-202ENST00000409251 SGMS2Q8NHU3 365 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 SPTSSAQ969W0 71 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 Q96M66 194 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 FAM234AQ9H0X4 552 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 MANBALQ9NQG1 85 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 NAT8Q9UHE5 227 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 ADGRG4Q8IZF6 3080 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 H0Y8G0 127 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 CFPP27918 469 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 MEF2BQ02080 365 aaPredicted RBP11.07□□□□□ -0.64
PTPRN-202ENST00000409251 PHYHD1Q5SRE7 291 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 ABHD17BQ5VST6 288 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 KCNIP4Q6PIL6 250 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 ABHD3Q8WU67 409 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 DERL1Q9BUN8 251 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 TMEM222Q9H0R3 208 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 DEFB127Q9H1M4 99 aa11.07□□□□□ -0.64
PTPRN-202ENST00000409251 A0A096LPE4 126 aa11.06□□□□□ -0.64
PTPRN-202ENST00000409251 A0A1W2PPZ6 126 aa11.06□□□□□ -0.64
PTPRN-202ENST00000409251 C20orf202A1L168 122 aa11.06□□□□□ -0.64
PTPRN-202ENST00000409251 DTYMKP23919 212 aa11.06□□□□□ -0.64
PTPRN-202ENST00000409251 CDKN1AP38936 164 aa11.06□□□□□ -0.64
PTPRN-202ENST00000409251 ECI1P42126 302 aa11.06□□□□□ -0.64
PTPRN-202ENST00000409251 RPL23P62829 140 aaKnown RBP11.06□□□□□ -0.64
PTPRN-202ENST00000409251 PNRC1Q12796 327 aaPredicted RBP11.06□□□□□ -0.64
PTPRN-202ENST00000409251 EIF3IQ13347 325 aaKnown RBP11.06□□□□□ -0.64
PTPRN-202ENST00000409251 NUP210LQ5VU65 1888 aa11.06□□□□□ -0.64
PTPRN-202ENST00000409251 C18orf12Q96KH6 178 aa11.06□□□□□ -0.64
PTPRN-202ENST00000409251 MRGPRX4Q96LA9 322 aa11.06□□□□□ -0.64
PTPRN-202ENST00000409251 COL12A1Q99715 3063 aa11.06□□□□□ -0.64
PTPRN-202ENST00000409251 MKRN2OSH3BPM6 223 aa11.06□□□□□ -0.64
PTPRN-202ENST00000409251 CCL11P51671 97 aa11.06□□□□□ -0.64
PTPRN-202ENST00000409251 COTL1Q14019 142 aa11.06□□□□□ -0.64
PTPRN-202ENST00000409251 ZNF611Q8N823 705 aa11.06□□□□□ -0.64
PTPRN-202ENST00000409251 OR4C12Q96R67 309 aa11.06□□□□□ -0.64
PTPRN-202ENST00000409251 SRXN1Q9BYN0 137 aa11.06□□□□□ -0.64
PTPRN-202ENST00000409251 IGKV1-27A0A075B6S5 117 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 GRB2P62993 217 aaKnown RBP11.05□□□□□ -0.64
PTPRN-202ENST00000409251 EXT1Q16394 746 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 Q6ZN92 141 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.05□□□□□ -0.64
PTPRN-202ENST00000409251 SELENOHQ8IZQ5 122 aaKnown RBP11.05□□□□□ -0.64
PTPRN-202ENST00000409251 PRRG4Q9BZD6 226 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 LPAR2Q9HBW0 351 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 WNK2Q9Y3S1 2297 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 IGKV1-12A0A0C4DH73 117 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 CLEC18AA5D8T8 446 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 ZIC3O60481 467 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 IGKV1D-12P01611 117 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 C1QTNF9P0C862 333 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 CHRNB4P30926 498 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 RAB7AP51149 207 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 GPM6AP51674 278 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 ZNF90Q03938 601 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 ARL16Q0P5N6 197 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms