RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 R4GN57 208 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 GTF3C1Q12789 2109 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 PAGE4O60829 102 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 RAB4AP20338 218 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 FKBP2P26885 142 aaKnown RBP13.14□□□□□ -0.31
ATG4B-205ENST00000404914 GCH1P30793 250 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 CNN1P51911 297 aaKnown RBP13.14□□□□□ -0.31
ATG4B-205ENST00000404914 DSCR4P56555 118 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-205ENST00000404914 MLF1P58340 268 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 C21orf62-AS1Q17RA5 79 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 IQCJQ1A5X6 159 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 TCF23Q7RTU1 214 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 C1orf210Q8IVY1 113 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 ZNF552Q9H707 407 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-205ENST00000404914 CACNA1HO95180 2353 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 PI4KAP42356 2102 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 TRAV24A0A0B4J272 114 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 M0R143 59 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 TMPRSS7Q7RTY8 843 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 CPT1CQ8TCG5 803 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 DERL1Q9BUN8 251 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 DCAF16Q9NXF7 216 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 RNF150Q9ULK6 438 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 ZNF318Q5VUA4 2279 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 A0A1W2PQM1 296 aa13.13□□□□□ -0.31
ATG4B-205ENST00000404914 CRYAAP02489 173 aa13.13□□□□□ -0.31
ATG4B-205ENST00000404914 RPL15P61313 204 aaKnown RBP13.13□□□□□ -0.31
ATG4B-205ENST00000404914 RAC1P63000 192 aa13.13□□□□□ -0.31
ATG4B-205ENST00000404914 TFF3Q07654 80 aa13.13□□□□□ -0.31
ATG4B-205ENST00000404914 C1orf194Q5T5A4 169 aa13.13□□□□□ -0.31
ATG4B-205ENST00000404914 FAM53AQ6NSI3 398 aaPredicted RBP13.13□□□□□ -0.31
ATG4B-205ENST00000404914 ZNF114Q8NC26 417 aa13.13□□□□□ -0.31
ATG4B-205ENST00000404914 OR10J5Q8NHC4 309 aa13.13□□□□□ -0.31
ATG4B-205ENST00000404914 SPSB4Q96A44 273 aa13.13□□□□□ -0.31
ATG4B-205ENST00000404914 FAM186AA6NE01 2351 aa13.13□□□□□ -0.31
ATG4B-205ENST00000404914 GPR179Q6PRD1 2367 aa13.13□□□□□ -0.31
ATG4B-205ENST00000404914 KIR2DL5BA0A0G2JN68 375 aa13.13□□□□□ -0.31
ATG4B-205ENST00000404914 KIR2DL5BA0A0G2JPC4 375 aa13.13□□□□□ -0.31
ATG4B-205ENST00000404914 FOXG1P55316 489 aaPredicted RBP13.13□□□□□ -0.31
ATG4B-205ENST00000404914 B3GALT5-AS1P59052 145 aa13.13□□□□□ -0.31
ATG4B-205ENST00000404914 GUSBP11Q6P575 273 aa13.13□□□□□ -0.31
ATG4B-205ENST00000404914 KIR2DL5AQ8N109 375 aa13.13□□□□□ -0.31
ATG4B-205ENST00000404914 ABHD3Q8WU67 409 aa13.13□□□□□ -0.31
ATG4B-205ENST00000404914 A0A096LPE4 126 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 A0A1W2PPZ6 126 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 ZNF503-AS2A6NEH8 195 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 TMEM210A6NLX4 147 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 LAMTOR5O43504 91 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 SLC25A6P12236 298 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 COL8A2P25067 703 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 PSMB3P49720 205 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 HBG1P69891 147 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 HBG2P69892 147 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 SRSF7Q16629 238 aaKnown RBP eCLIP13.12□□□□□ -0.318e-7■□□□□ 11.3
ATG4B-205ENST00000404914 ACSF3Q4G176 576 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-205ENST00000404914 GGNQ86UU5 652 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 SDSLQ96GA7 329 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 TMEM208Q9BTX3 173 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 C1QTNF5Q9BXJ0 243 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 GPR35Q9HC97 309 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 KMT2EQ8IZD2 1858 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 GRIFINA4D1Z8 144 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 FAM90A10PA6NDY2 464 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 FAM90A18PA6NE21 464 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 FAM90A16PA6NEW6 464 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 FAM90A20PA6NIJ5 464 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 FAM90A8PA6NJQ4 464 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 FAM90A7PA6NKC0 464 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 FAM90A22PA8MWA6 464 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 FAM90A12PA8MX19 464 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 FAM90A5PA8MXJ8 464 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 FAM90A23PA8MXZ1 464 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 TMEM250H0YL14 139 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 CLDN1O95832 211 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 NGFP01138 241 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 FAM90A15PP0C7V4 464 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 FAM90A13PP0C7W8 464 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 FAM90A14PP0C7W9 464 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 FAM90A24PP0C7X0 464 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 CACNA1DQ01668 2161 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 CST9LP1Q5W188 147 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 NBEAQ8NFP9 2946 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 PINX1Q96BK5 328 aaKnown RBP13.12□□□□□ -0.31
ATG4B-205ENST00000404914 SGCZQ96LD1 299 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 PRRG4Q9BZD6 226 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 NAGKQ9UJ70 344 aa13.12□□□□□ -0.31
ATG4B-205ENST00000404914 TYMSP04818 313 aa13.11□□□□□ -0.31
ATG4B-205ENST00000404914 RFPL3SP0C7P2 107 aa13.11□□□□□ -0.31
ATG4B-205ENST00000404914 C1QTNF9P0C862 333 aa13.11□□□□□ -0.31
ATG4B-205ENST00000404914 HOXA6P31267 233 aa13.11□□□□□ -0.31
ATG4B-205ENST00000404914 RAC3P60763 192 aa13.11□□□□□ -0.31
ATG4B-205ENST00000404914 TBX15Q96SF7 602 aa13.11□□□□□ -0.31
ATG4B-205ENST00000404914 OCIAD1Q9NX40 245 aa13.11□□□□□ -0.31
ATG4B-205ENST00000404914 RARRES3Q9UL19 164 aa13.11□□□□□ -0.31
ATG4B-205ENST00000404914 WDR1O75083 606 aa13.11□□□□□ -0.31
ATG4B-205ENST00000404914 IRF2P14316 349 aa13.11□□□□□ -0.31
ATG4B-205ENST00000404914 MPLP40238 635 aa13.11□□□□□ -0.31
ATG4B-205ENST00000404914 ACOT6Q3I5F7 207 aaPredicted RBP13.11□□□□□ -0.31
ATG4B-205ENST00000404914 ZNF705AQ6ZN79 300 aaPredicted RBP13.11□□□□□ -0.31
ATG4B-205ENST00000404914 CISD2Q8N5K1 135 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms