RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 MEX3AA1L020 520 aaKnown RBP17.33■□□□□ 0.37
TPM1-208ENST00000404484 PGLYRP1O75594 196 aaPredicted RBP17.33■□□□□ 0.37
TPM1-208ENST00000404484 SIX6O95475 246 aa17.33■□□□□ 0.37
TPM1-208ENST00000404484 LTC4SQ16873 150 aa17.33■□□□□ 0.37
TPM1-208ENST00000404484 LIAT1Q6ZQX7 453 aa17.33■□□□□ 0.37
TPM1-208ENST00000404484 WFDC11Q8NEX6 87 aa17.33■□□□□ 0.37
TPM1-208ENST00000404484 OR8B3Q8NGG8 313 aa17.33■□□□□ 0.37
TPM1-208ENST00000404484 RAB39BQ96DA2 213 aa17.33■□□□□ 0.37
TPM1-208ENST00000404484 ZNF714Q96N38 554 aa17.33■□□□□ 0.37
TPM1-208ENST00000404484 OR8B2Q96RD0 313 aa17.33■□□□□ 0.37
TPM1-208ENST00000404484 GSX2Q9BZM3 304 aa17.33■□□□□ 0.37
TPM1-208ENST00000404484 PARP12Q9H0J9 701 aaKnown RBP17.33■□□□□ 0.37
TPM1-208ENST00000404484 C19orf12Q9NSK7 152 aa17.33■□□□□ 0.37
TPM1-208ENST00000404484 GFOD1Q9NXC2 390 aa17.33■□□□□ 0.37
TPM1-208ENST00000404484 IGHV3-43A0A0B4J1X8 118 aa17.32■□□□□ 0.36
TPM1-208ENST00000404484 H0Y980 276 aa17.32■□□□□ 0.36
TPM1-208ENST00000404484 LY6HO94772 140 aa17.32■□□□□ 0.36
TPM1-208ENST00000404484 IFNA21P01568 189 aa17.32■□□□□ 0.36
TPM1-208ENST00000404484 IGHV3-43DP0DP04 118 aa17.32■□□□□ 0.36
TPM1-208ENST00000404484 PAX1P15863 534 aa17.32■□□□□ 0.36
TPM1-208ENST00000404484 LOXL3P58215 753 aa17.32■□□□□ 0.36
TPM1-208ENST00000404484 CYCSP99999 105 aaKnown RBP17.32■□□□□ 0.36
TPM1-208ENST00000404484 MORN2Q502X0 79 aa17.32■□□□□ 0.36
TPM1-208ENST00000404484 AVPI1Q5T686 147 aa17.32■□□□□ 0.36
TPM1-208ENST00000404484 DCAF12L2Q5VW00 463 aa17.32■□□□□ 0.36
TPM1-208ENST00000404484 NEIL1Q96FI4 390 aaPredicted RBP17.32■□□□□ 0.36
TPM1-208ENST00000404484 OR2D2Q9H210 308 aa17.32■□□□□ 0.36
TPM1-208ENST00000404484 METTL8Q9H825 291 aaKnown RBP17.32■□□□□ 0.36
TPM1-208ENST00000404484 C5orf51A6NDU8 294 aa17.32■□□□□ 0.36
TPM1-208ENST00000404484 FAM25EA8MYX2 175 aa17.32■□□□□ 0.36
TPM1-208ENST00000404484 CCSO14618 274 aa17.32■□□□□ 0.36
TPM1-208ENST00000404484 RAB7AP51149 207 aa17.32■□□□□ 0.36
TPM1-208ENST00000404484 FGFRL1Q8N441 504 aa17.32■□□□□ 0.36
TPM1-208ENST00000404484 DRAM1Q8N682 238 aa17.32■□□□□ 0.36
TPM1-208ENST00000404484 GLYATL2Q8WU03 294 aa17.32■□□□□ 0.36
TPM1-208ENST00000404484 TMEM222Q9H0R3 208 aa17.32■□□□□ 0.36
TPM1-208ENST00000404484 LIN7CQ9NUP9 197 aaKnown RBP17.32■□□□□ 0.36
TPM1-208ENST00000404484 FLNAP21333 2647 aaKnown RBP17.31■□□□□ 0.36
TPM1-208ENST00000404484 SMLR1H3BR10 107 aa17.31■□□□□ 0.36
TPM1-208ENST00000404484 F2RP25116 425 aa17.31■□□□□ 0.36
TPM1-208ENST00000404484 GPR6P46095 362 aaPredicted RBP17.31■□□□□ 0.36
TPM1-208ENST00000404484 FGL1Q08830 312 aa17.31■□□□□ 0.36
TPM1-208ENST00000404484 SP6Q3SY56 376 aa17.31■□□□□ 0.36
TPM1-208ENST00000404484 TMEM200BQ69YZ2 307 aa17.31■□□□□ 0.36
TPM1-208ENST00000404484 MSI2Q96DH6 328 aaKnown RBP17.31■□□□□ 0.36
TPM1-208ENST00000404484 TP53RKQ96S44 253 aa17.31■□□□□ 0.36
TPM1-208ENST00000404484 COMMD9Q9P000 198 aa17.31■□□□□ 0.36
TPM1-208ENST00000404484 MTORP42345 2549 aa17.31■□□□□ 0.36
TPM1-208ENST00000404484 A0A1W2PPH5 198 aa17.3■□□□□ 0.36
TPM1-208ENST00000404484 FCN3O75636 299 aa17.3■□□□□ 0.36
TPM1-208ENST00000404484 SNAPC5O75971 98 aa17.3■□□□□ 0.36
TPM1-208ENST00000404484 IGLV2-14P01704 120 aa17.3■□□□□ 0.36
TPM1-208ENST00000404484 UCP1P25874 307 aa17.3■□□□□ 0.36
TPM1-208ENST00000404484 NKX2-5P52952 324 aaPredicted RBP17.3■□□□□ 0.36
TPM1-208ENST00000404484 ZNF273Q14593 569 aa17.3■□□□□ 0.36
TPM1-208ENST00000404484 HEPN1Q6WQI6 88 aa17.3■□□□□ 0.36
TPM1-208ENST00000404484 NMES1Q9C002 83 aa17.3■□□□□ 0.36
TPM1-208ENST00000404484 PRR13Q9NZ81 148 aa17.3■□□□□ 0.36
TPM1-208ENST00000404484 PSG11Q9UQ72 335 aa17.3■□□□□ 0.36
TPM1-208ENST00000404484 C13orf42A0A1B0GVH6 325 aa17.29■□□□□ 0.36
TPM1-208ENST00000404484 DUXBA0A1W2PPF3 345 aa17.29■□□□□ 0.36
TPM1-208ENST00000404484 TNFSF12O43508 249 aa17.29■□□□□ 0.36
TPM1-208ENST00000404484 HOXB5P09067 269 aa17.29■□□□□ 0.36
TPM1-208ENST00000404484 OMGP23515 440 aa17.29■□□□□ 0.36
TPM1-208ENST00000404484 ATP5J2P56134 94 aa17.29■□□□□ 0.36
TPM1-208ENST00000404484 CATR1Q13166 79 aa17.29■□□□□ 0.36
TPM1-208ENST00000404484 Q3ZCU0 254 aa17.29■□□□□ 0.36
TPM1-208ENST00000404484 Q5PR19 223 aa17.29■□□□□ 0.36
TPM1-208ENST00000404484 IL22RA2Q969J5 263 aa17.29■□□□□ 0.36
TPM1-208ENST00000404484 TMEM56Q96MV1 263 aa17.29■□□□□ 0.36
TPM1-208ENST00000404484 RPUSD1Q9UJJ7 312 aaKnown RBP17.29■□□□□ 0.36
TPM1-208ENST00000404484 TMEM56-RWDD3S4R434 201 aa17.29■□□□□ 0.36
TPM1-208ENST00000404484 ADAP1O75689 374 aa17.28■□□□□ 0.36
TPM1-208ENST00000404484 GPR12P47775 334 aa17.28■□□□□ 0.36
TPM1-208ENST00000404484 PRSS57Q6UWY2 283 aa17.28■□□□□ 0.36
TPM1-208ENST00000404484 ZNF841Q6ZN19 808 aa17.28■□□□□ 0.36
TPM1-208ENST00000404484 ZNF695Q8IW36 515 aa17.28■□□□□ 0.36
TPM1-208ENST00000404484 AGMATQ9BSE5 352 aa17.28■□□□□ 0.36
TPM1-208ENST00000404484 ABHD14AQ9BUJ0 271 aa17.28■□□□□ 0.36
TPM1-208ENST00000404484 TMUB1Q9BVT8 246 aa17.28■□□□□ 0.36
TPM1-208ENST00000404484 PATZ1Q9HBE1 687 aaKnown RBP17.28■□□□□ 0.36
TPM1-208ENST00000404484 RNF150Q9ULK6 438 aa17.28■□□□□ 0.36
TPM1-208ENST00000404484 TMED3Q9Y3Q3 217 aa17.28■□□□□ 0.36
TPM1-208ENST00000404484 ST8SIA5O15466 376 aa17.28■□□□□ 0.36
TPM1-208ENST00000404484 SERPINE2P07093 398 aa17.28■□□□□ 0.36
TPM1-208ENST00000404484 NFYBP25208 207 aa17.28■□□□□ 0.36
TPM1-208ENST00000404484 PRAMEF5Q5TYX0 476 aa17.28■□□□□ 0.36
TPM1-208ENST00000404484 ZNF66Q6ZN08 573 aa17.28■□□□□ 0.36
TPM1-208ENST00000404484 TCTEX1D1Q8N7M0 179 aa17.28■□□□□ 0.36
TPM1-208ENST00000404484 OR51H1Q8NH63 302 aa17.28■□□□□ 0.36
TPM1-208ENST00000404484 C18orf12Q96KH6 178 aa17.28■□□□□ 0.36
TPM1-208ENST00000404484 C2orf50Q96LR7 162 aa17.28■□□□□ 0.36
TPM1-208ENST00000404484 NDUFS7O75251 213 aa17.27■□□□□ 0.35
TPM1-208ENST00000404484 CDS2O95674 445 aa17.27■□□□□ 0.35
TPM1-208ENST00000404484 TMEM268Q5VZI3 342 aa17.27■□□□□ 0.35
TPM1-208ENST00000404484 GGNBP1Q5YKI7 109 aa17.27■□□□□ 0.35
TPM1-208ENST00000404484 WDR25Q64LD2 544 aaPredicted RBP17.27■□□□□ 0.35
TPM1-208ENST00000404484 FAM53AQ6NSI3 398 aaPredicted RBP17.27■□□□□ 0.35
TPM1-208ENST00000404484 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.27■□□□□ 0.35
TPM1-208ENST00000404484 SEC22AQ96IW7 307 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms