RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 RTL8AQ9BWD3 113 aa8.64□□□□□ -1.03
PTPRM-203ENST00000400060 WNT10AQ9GZT5 417 aa8.64□□□□□ -1.03
PTPRM-203ENST00000400060 SH2D1BO14796 132 aa8.64□□□□□ -1.03
PTPRM-203ENST00000400060 SPRY1O43609 319 aaPredicted RBP8.64□□□□□ -1.03
PTPRM-203ENST00000400060 CRYAAP02489 173 aa8.64□□□□□ -1.03
PTPRM-203ENST00000400060 CFIP05156 583 aa8.64□□□□□ -1.03
PTPRM-203ENST00000400060 MC5RP33032 325 aa8.64□□□□□ -1.03
PTPRM-203ENST00000400060 SSPNQ14714 243 aa8.64□□□□□ -1.03
PTPRM-203ENST00000400060 FAM166AQ6J272 317 aa8.64□□□□□ -1.03
PTPRM-203ENST00000400060 ZDHHC23Q8IYP9 409 aa8.64□□□□□ -1.03
PTPRM-203ENST00000400060 OR9G4Q8NGQ1 327 aa8.64□□□□□ -1.03
PTPRM-203ENST00000400060 CD207Q9UJ71 328 aa8.64□□□□□ -1.03
PTPRM-203ENST00000400060 SSUH2Q9Y2M2 353 aa8.64□□□□□ -1.03
PTPRM-203ENST00000400060 THY1P04216 161 aa8.64□□□□□ -1.03
PTPRM-203ENST00000400060 PFN1P07737 140 aaKnown RBP8.64□□□□□ -1.03
PTPRM-203ENST00000400060 SCGB1C2P0DMR2 95 aa8.64□□□□□ -1.03
PTPRM-203ENST00000400060 CHCHD1Q96BP2 118 aaKnown RBP8.64□□□□□ -1.03
PTPRM-203ENST00000400060 IGLV1-36A0A0B4J1U3 117 aa8.64□□□□□ -1.03
PTPRM-203ENST00000400060 IGHV2OR16-5A0A0B4J2B6 119 aa8.64□□□□□ -1.03
PTPRM-203ENST00000400060 TSPAN2O60636 221 aa8.64□□□□□ -1.03
PTPRM-203ENST00000400060 RBPJQ06330 500 aa8.64□□□□□ -1.03
PTPRM-203ENST00000400060 UNC119Q13432 240 aa8.64□□□□□ -1.03
PTPRM-203ENST00000400060 DEFB119Q8N690 84 aa8.64□□□□□ -1.03
PTPRM-203ENST00000400060 DUSP15Q9H1R2 295 aaPredicted RBP8.64□□□□□ -1.03
PTPRM-203ENST00000400060 MYO9BQ13459 2157 aa8.64□□□□□ -1.03
PTPRM-203ENST00000400060 COX7A2P2O60397 106 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 TSC2P49815 1807 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 TIAF1O95411 115 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 EML2O95834 649 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 CCL20P78556 96 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 SSX8Q7RTT4 187 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 C19orf24Q9BVV8 132 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 A6NCN8 305 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 OTOL1A6NHN0 477 aaPredicted RBP8.63□□□□□ -1.03
PTPRM-203ENST00000400060 NPIPB13A6NJU9 1138 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 ALG1L2C9J202 215 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 NPIPB4C9JG80 1138 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 PRRT4C9JH25 899 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 IGLC2P0DOY2 106 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 IGLC3P0DOY3 106 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 PVRP15151 417 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 APOBEC3AP31941 199 aaPredicted RBP8.63□□□□□ -1.03
PTPRM-203ENST00000400060 SMAGPQ0VAQ4 97 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 MORN2Q502X0 79 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 TMEM164Q5U3C3 297 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 FAM90A2PQ658T7 463 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 ANKRD37Q7Z713 158 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 ZNF519Q8TB69 540 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 IGHV2-26A0A0B4J1V2 119 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 IZUMO1RA6ND01 250 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 A8MWL6 223 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 OR1C1Q15619 314 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 OR5P3Q8WZ94 311 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 NEUROG1Q92886 237 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 C8orf44Q96CB5 159 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 FAM173AQ9BQD7 235 aa8.63□□□□□ -1.03
PTPRM-203ENST00000400060 ADH4P08319 380 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 GPR3P46089 330 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 DUSP3P51452 185 aaPredicted RBP8.62□□□□□ -1.03
PTPRM-203ENST00000400060 FAM53BQ14153 422 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 TMEM249Q2WGJ8 235 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 CXorf66Q5JRM2 361 aaPredicted RBP8.62□□□□□ -1.03
PTPRM-203ENST00000400060 C9orf50Q5SZB4 431 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 LINC00114Q6XXX2 140 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 VSTM2LQ96N03 204 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 CDX2Q99626 313 aaPredicted RBP8.62□□□□□ -1.03
PTPRM-203ENST00000400060 SFXN3Q9BWM7 321 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 OR2D2Q9H210 308 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 ERRFI1Q9UJM3 462 aaPredicted RBP8.62□□□□□ -1.03
PTPRM-203ENST00000400060 RARRES3Q9UL19 164 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 ZNF835Q9Y2P0 537 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 PAPPA2Q9BXP8 1791 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 K7ESM1 405 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 ZFAND5O76080 213 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 CA1P00915 261 aaPredicted RBP8.62□□□□□ -1.03
PTPRM-203ENST00000400060 C1QTNF9P0C862 333 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 CAMPP49913 170 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 MFAP2P55001 183 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 FER1L6-AS1Q8NA97 138 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.62□□□□□ -1.03
PTPRM-203ENST00000400060 DENND4AQ7Z401 1863 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.62□□□□□ -1.03
PTPRM-203ENST00000400060 HYPMO75409 117 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 SNCGO76070 127 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 DXOO77932 396 aaKnown RBP8.62□□□□□ -1.03
PTPRM-203ENST00000400060 TOMM40O96008 361 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 P01737 135 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 RRADP55042 308 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 LHX8Q68G74 356 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 TMEFF1Q8IYR6 380 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 VSTM2AQ8TAG5 236 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 OR8B2Q96RD0 313 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 STARD5Q9NSY2 213 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 SPANXCQ9NY87 97 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 H3BUT2 72 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 TEX29Q8N6K0 151 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 GALMQ96C23 342 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 GPR146Q96CH1 333 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 Q96M66 194 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 SPANXDQ9BXN6 97 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms