RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 TFAP2AP05549 437 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 HIST1H1DP16402 221 aaKnown RBP9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 EMC4Q5J8M3 183 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 PABPC1L2AQ5JQF8 200 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 RAB33BQ9H082 229 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 SLC25A15Q9Y619 301 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 SPCS1Q9Y6A9 102 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 ARRDC5A6NEK1 342 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 F12P00748 615 aaPredicted RBP9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 SELENOPP49908 381 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 FAM3BP58499 235 aaPredicted RBP9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 ARIH2OSQ8N7S6 290 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 TCRBV16S1A1N1A0A5B0 115 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 ZIC3O60481 467 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 LINC00614P0C842 121 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 MEF2BQ02080 365 aaPredicted RBP9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 GAGE2EQ4V326 116 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 FAM27D1Q5T7N8 215 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 MRPL52Q86TS9 123 aaKnown RBP9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 ANGPTL4Q9BY76 406 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 GAGE2DQ9UEU5 116 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 TIAM2Q8IVF5 1701 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 RNASE4P34096 147 aaKnown RBP9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 P2RY4P51582 365 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 FABP5Q01469 135 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 KIAA1644Q3SXP7 199 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 GVQW1Q8N7I0 195 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 ZNF707Q96C28 371 aaPredicted RBP9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 TMEM38AQ9H6F2 299 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 SIRT7Q9NRC8 400 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 PPIAL4EA0A075B759 164 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 PPIAL4DF5H284 164 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 SIGLEC5O15389 551 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 CHST1O43916 411 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 HSPB1P04792 205 aaKnown RBP9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 PPIAL4FP0DN26 164 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 CFHR1Q03591 330 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 ZNF680Q8NEM1 530 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 PPIAL4AQ9Y536 164 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 LRP12Q9Y561 859 aa9.72□□□□□ -0.85
CACNA1C-217ENST00000399641 HOXD3P31249 432 aaPredicted RBP9.71□□□□□ -0.85
CACNA1C-217ENST00000399641 TGIF1Q15583 401 aa9.71□□□□□ -0.85
CACNA1C-217ENST00000399641 OR8D4Q8NGM9 314 aa9.71□□□□□ -0.85
CACNA1C-217ENST00000399641 FUT5Q11128 374 aa9.71□□□□□ -0.85
CACNA1C-217ENST00000399641 LINC01560Q8TB33 94 aa9.71□□□□□ -0.85
CACNA1C-217ENST00000399641 CLEC7AQ9BXN2 247 aa9.71□□□□□ -0.85
CACNA1C-217ENST00000399641 MYH11P35749 1972 aa9.71□□□□□ -0.85
CACNA1C-217ENST00000399641 TRGV2A0A075B6R0 118 aa9.71□□□□□ -0.86
CACNA1C-217ENST00000399641 DMRTA1Q5VZB9 504 aa9.71□□□□□ -0.86
CACNA1C-217ENST00000399641 AKIP1Q9NQ31 210 aa9.71□□□□□ -0.86
CACNA1C-217ENST00000399641 CBLN4Q9NTU7 201 aa9.71□□□□□ -0.86
CACNA1C-217ENST00000399641 PRSS42Q7Z5A4 293 aa9.71□□□□□ -0.86
CACNA1C-217ENST00000399641 FBXL15Q9H469 300 aa9.71□□□□□ -0.86
CACNA1C-217ENST00000399641 TRAV2A0A0B4J234 112 aa9.71□□□□□ -0.86
CACNA1C-217ENST00000399641 WNT9BO14905 357 aa9.71□□□□□ -0.86
CACNA1C-217ENST00000399641 MBPP02686 304 aaPredicted RBP9.71□□□□□ -0.86
CACNA1C-217ENST00000399641 BTG1P62324 171 aa9.71□□□□□ -0.86
CACNA1C-217ENST00000399641 FMODQ06828 376 aa9.71□□□□□ -0.86
CACNA1C-217ENST00000399641 SRSF6Q13247 344 aaKnown RBP9.71□□□□□ -0.86
CACNA1C-217ENST00000399641 PMCHL1Q16048 86 aa9.71□□□□□ -0.86
CACNA1C-217ENST00000399641 NSUN5P1Q3KNT7 163 aa9.71□□□□□ -0.86
CACNA1C-217ENST00000399641 FAM71F2Q6NXP2 309 aa9.71□□□□□ -0.86
CACNA1C-217ENST00000399641 DEGS2Q6QHC5 323 aa9.71□□□□□ -0.86
CACNA1C-217ENST00000399641 PGLYRP3Q96LB9 341 aa9.71□□□□□ -0.86
CACNA1C-217ENST00000399641 SLC25A2Q9BXI2 301 aa9.71□□□□□ -0.86
CACNA1C-217ENST00000399641 SLC25A37Q9NYZ2 338 aa9.71□□□□□ -0.86
CACNA1C-217ENST00000399641 KCNE3Q9Y6H6 103 aa9.71□□□□□ -0.86
CACNA1C-217ENST00000399641 FOXI3A8MTJ6 420 aaPredicted RBP9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 TSPAN7P41732 249 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 SAXO2Q658L1 398 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 GLDNQ6ZMI3 551 aaPredicted RBP9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 TMEM229BQ8NBD8 167 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 NT5CQ8TCD5 201 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 LINC01587Q99440 93 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 TRBV20OR9-2A0A075B6H5 130 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 TRAV41A0A0B4J266 112 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 SNRPGP15A8MWD9 76 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 M0R381 172 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 CEACAM4O75871 244 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 NCR2O95944 276 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 FUT3P21217 361 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 ISL1P61371 349 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 VAX1Q5SQQ9 334 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 Q6ZNB5 142 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 PELI3Q8N2H9 469 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 MYH7BA7E2Y1 1941 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 KBTBD11-OT1A0A1B0GTJ5 212 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 hCG_38984A0A1B0GV85 526 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 C9orf170A2RU37 121 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 IGHV3-48P01763 117 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 OR4X2Q8NGF9 303 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 OR6X1Q8NH79 312 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 GLMPQ8WWB7 406 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 FAM168AQ92567 244 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 FIZ1Q96SL8 496 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 C1orf43Q9BWL3 253 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 INSL4Q14641 139 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 UNQ6494/PRO21346Q6UXR6 183 aa9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 SRSF12Q8WXF0 261 aaKnown RBP9.7□□□□□ -0.86
CACNA1C-217ENST00000399641 PMCHL2Q9BQD1 86 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 5.9 ms