RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 SMIM4Q8WVI0 70 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 TMEM56-RWDD3S4R434 201 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 PTPRZ1P23471 2315 aaPredicted RBP9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 NPBWR2P48146 333 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 SCAND1P57086 179 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 STHQ8IWL8 128 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 BCL2L10Q9HD36 194 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 HIGD1AQ9Y241 93 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 WNK3Q9BYP7 1800 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 LOC101059948A0A1B0GTJ6 334 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 HMSDA8MTL9 139 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 K7N7A8 449 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 TRGV3P03979 118 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 CD99P14209 185 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 GNLYP22749 145 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 ZNF415Q09FC8 603 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 IL13RA2Q14627 380 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 C9orf62Q8N4C0 152 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 FAM89BQ8N5H3 189 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 OR5AU1Q8NGC0 362 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 UCN2Q96RP3 112 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 HDHD3Q9BSH5 251 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 SFXN3Q9BWM7 321 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 WDR54Q9H977 334 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 KCNE3Q9Y6H6 103 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 IFNL4K9M1U5 179 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 KIAA0040Q15053 153 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 NUBPLQ8TB37 319 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 C7orf66A4D0T2 115 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 ZNF253O75346 499 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 EEF1AKMT3Q96AZ1 226 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 SSBP3Q9BWW4 388 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 FLRT3Q9NZU0 649 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 KLK11Q9UBX7 282 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 PAGE4O60829 102 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 TSPOP30536 169 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 PMELP40967 661 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 RPL32P62910 135 aaKnown RBP9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 ZNF362Q5T0B9 420 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 STPG3Q8N7X2 389 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 FAM169BQ8N8A8 192 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 OR10G8Q8NGN5 311 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 PEMTQ9UBM1 199 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 TRBV5-4A0A0C4DH59 114 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 CTLA4P16410 223 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 PRDX2P32119 198 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 SFTA2Q6UW10 78 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 ERASQ7Z444 233 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 OR2T10Q8NGZ9 312 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 DNASE2BQ8WZ79 361 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 RAB24Q969Q5 203 aa9.56□□□□□ -0.88
CACNA1C-210ENST00000399606 DLX6P56179 175 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 LRRC75BQ2VPJ9 315 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 TMEM249Q2WGJ8 235 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 S100A7L2Q5SY68 101 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 TMEM183AQ8IXX5 376 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 ARRDC1Q8N5I2 433 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 SLC25A28Q96A46 364 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 PDFQ9HBH1 243 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 GP6Q9HCN6 339 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 ELOVL5Q9NYP7 299 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 CACNG5Q9UF02 275 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 ARID1BQ8NFD5 2236 aaPredicted RBP9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 IGHV1-45A0A0A0MS14 117 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 IGLV3-27P01718 113 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 MBPP02686 304 aaPredicted RBP9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 CRPP02741 224 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 KHDC3LQ587J8 217 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 LILRA6Q6PI73 481 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 OVCH2Q7RTZ1 564 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 DUX3Q96PT4 197 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 SF3B5Q9BWJ5 86 aaKnown RBP9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 CROCCQ5TZA2 2017 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 TRGV2A0A075B6R0 118 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 J3QKU1 62 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 PLPP3O14495 311 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 HLA-DQB1P01920 261 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 GZMHP20718 246 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 PRICKLE4Q2TBC4 344 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 C9orf170A2RU37 121 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 RBFOX3A6NFN3 312 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 ISLRO14498 428 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 SRSF10O75494 262 aaKnown RBP9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 HIST1H1BP16401 226 aaKnown RBP9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 FOXL2P58012 376 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 MRM1Q6IN84 353 aaKnown RBP9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 LIAT1Q6ZQX7 453 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 PNKDQ8N490 385 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 SPOCK3Q9BQ16 436 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 SLC25A33Q9BSK2 321 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 OR2H1Q9GZK4 316 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 OR51B2Q9Y5P1 312 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 FER1L6Q2WGJ9 1857 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 TDGF1P13385 188 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 COL8A1P27658 744 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 APOBEC3AP31941 199 aaPredicted RBP9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 MVDP53602 400 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 P2RY6Q15077 328 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 COX19Q49B96 90 aa9.55□□□□□ -0.88
CACNA1C-210ENST00000399606 OR1L8Q8NGR8 309 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms