RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 ADORA2A-AS1P86434 159 aa12.7□□□□□ -0.38
COL25A1-201ENST00000399126 ZNF497Q6ZNH5 498 aa12.7□□□□□ -0.38
COL25A1-201ENST00000399126 MOB3AQ96BX8 217 aa12.7□□□□□ -0.38
COL25A1-201ENST00000399126 KIRREL1Q96J84 757 aa12.7□□□□□ -0.38
COL25A1-201ENST00000399126 EGLN1Q9GZT9 426 aa12.7□□□□□ -0.38
COL25A1-201ENST00000399126 PRDM13Q9H4Q3 707 aa12.7□□□□□ -0.38
COL25A1-201ENST00000399126 DYSFO75923 2080 aa12.7□□□□□ -0.38
COL25A1-201ENST00000399126 IGKV1D-13A0A0B4J2D9 117 aa12.7□□□□□ -0.38
COL25A1-201ENST00000399126 COLCA2A8K830 154 aa12.7□□□□□ -0.38
COL25A1-201ENST00000399126 IGKV1-13P0DP09 117 aa12.7□□□□□ -0.38
COL25A1-201ENST00000399126 PKIAP61925 76 aa12.7□□□□□ -0.38
COL25A1-201ENST00000399126 RPS23P62266 143 aaKnown RBP12.7□□□□□ -0.38
COL25A1-201ENST00000399126 SP6Q3SY56 376 aa12.7□□□□□ -0.38
COL25A1-201ENST00000399126 ZNF880Q6PDB4 577 aa12.7□□□□□ -0.38
COL25A1-201ENST00000399126 GCSAMQ8N6F7 178 aa12.7□□□□□ -0.38
COL25A1-201ENST00000399126 TPRX1Q8N7U7 411 aa12.7□□□□□ -0.38
COL25A1-201ENST00000399126 NUP37Q8NFH4 326 aa12.7□□□□□ -0.38
COL25A1-201ENST00000399126 LINC01560Q8TB33 94 aa12.7□□□□□ -0.38
COL25A1-201ENST00000399126 IL1F10Q8WWZ1 152 aa12.7□□□□□ -0.38
COL25A1-201ENST00000399126 CARHSP1Q9Y2V2 147 aaKnown RBP12.7□□□□□ -0.38
COL25A1-201ENST00000399126 KCNIP3Q9Y2W7 256 aa12.7□□□□□ -0.38
COL25A1-201ENST00000399126 ARFGEF3Q5TH69 2177 aa12.69□□□□□ -0.38
COL25A1-201ENST00000399126 TRAV14DV4A0A0A6YYC5 116 aa12.69□□□□□ -0.38
COL25A1-201ENST00000399126 TSTD3H0UI37 97 aa12.69□□□□□ -0.38
COL25A1-201ENST00000399126 IGHV1-46P01743 117 aa12.69□□□□□ -0.38
COL25A1-201ENST00000399126 USF2Q15853 346 aaPredicted RBP12.69□□□□□ -0.38
COL25A1-201ENST00000399126 FXYD6-FXYD2A0A087WZ82 144 aa12.69□□□□□ -0.38
COL25A1-201ENST00000399126 C13orf42A0A1B0GVH6 325 aa12.69□□□□□ -0.38
COL25A1-201ENST00000399126 OR4A8P0C604 315 aa12.69□□□□□ -0.38
COL25A1-201ENST00000399126 AGAP20933 346 aa12.69□□□□□ -0.38
COL25A1-201ENST00000399126 SERPINF1P36955 418 aa12.69□□□□□ -0.38
COL25A1-201ENST00000399126 CEACAM6P40199 344 aa12.69□□□□□ -0.38
COL25A1-201ENST00000399126 VAMP2P63027 116 aa12.69□□□□□ -0.38
COL25A1-201ENST00000399126 AESQ08117 197 aa12.69□□□□□ -0.38
COL25A1-201ENST00000399126 PMS2P11Q13670 270 aa12.69□□□□□ -0.38
COL25A1-201ENST00000399126 CD177Q8N6Q3 437 aa12.69□□□□□ -0.38
COL25A1-201ENST00000399126 BSCL2Q96G97 398 aaPredicted RBP12.69□□□□□ -0.38
COL25A1-201ENST00000399126 SLC2A9Q9NRM0 540 aa12.69□□□□□ -0.38
COL25A1-201ENST00000399126 OR1A1Q9P1Q5 309 aa12.69□□□□□ -0.38
COL25A1-201ENST00000399126 PUS1Q9Y606 427 aaKnown RBP eCLIP12.69□□□□□ -0.38
COL25A1-201ENST00000399126 TRBV6-6A0A0A6YYG2 114 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 KIR2DS1A0A191URI9 304 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 CRYM-AS1A6NIL9 109 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 ARPC5O15511 151 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 KIR2DS4P43632 304 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 ASCL1P50553 236 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 HERV-K104P61576 105 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 HLA-DRB3P79483 266 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 COL10A1Q03692 680 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 TNFRSF9Q07011 255 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 KIR2DS1Q14954 304 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 SRSF7Q16629 238 aaKnown RBP eCLIP12.68□□□□□ -0.38
COL25A1-201ENST00000399126 PYY3Q5JQD4 70 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 FAM53AQ6NSI3 398 aaPredicted RBP12.68□□□□□ -0.38
COL25A1-201ENST00000399126 ARL6Q9H0F7 186 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 BARX1Q9HBU1 254 aaPredicted RBP12.68□□□□□ -0.38
COL25A1-201ENST00000399126 TRAPPC2LQ9UL33 140 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 CACNA1BQ00975 2339 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 TEX13DA0A0J9YY54 714 aaPredicted RBP12.68□□□□□ -0.38
COL25A1-201ENST00000399126 A0A1W2PPE3 182 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 SRRM5B3KS81 715 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 AP4M1O00189 453 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 TK1P04183 234 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 HIST1H1BP16401 226 aaKnown RBP12.68□□□□□ -0.38
COL25A1-201ENST00000399126 SELENOVP59797 346 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 SMIM21Q3B7S5 101 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 C10orf91Q5T1B1 145 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 SECTM1Q8WVN6 248 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 RTN4IP1Q8WWV3 396 aaPredicted RBP12.68□□□□□ -0.38
COL25A1-201ENST00000399126 ZNF479Q96JC4 524 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 RASL12Q9NYN1 266 aa12.68□□□□□ -0.38
COL25A1-201ENST00000399126 RAI1Q7Z5J4 1906 aaPredicted RBP12.68□□□□□ -0.38
COL25A1-201ENST00000399126 IGKV1D-17A0A075B6S4 117 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 F5H0A9 414 aaPredicted RBP12.67□□□□□ -0.38
COL25A1-201ENST00000399126 HOXB5P09067 269 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 PSG2P11465 335 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 OR3A1P47881 315 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 UBE2G2P60604 165 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 ABCA11PQ4W5N1 156 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 DNLZQ5SXM8 178 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 SPNS3Q6ZMD2 512 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 C15orf54Q8N8G6 183 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 COQ2Q96H96 371 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 PARP12Q9H0J9 701 aaKnown RBP12.67□□□□□ -0.38
COL25A1-201ENST00000399126 NQO2P16083 231 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 HLA-GP17693 338 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 LMO1P25800 156 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 CHRNB4P30926 498 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 GNRHRP30968 328 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 ECI1P42126 302 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 CCL8P80075 99 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 GAPTQ8N292 157 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 PPP1R1CQ8WVI7 109 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 R3HDM4Q96D70 268 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 PLPPR2Q96GM1 343 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 GCM1Q9NP62 436 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 SIRT7Q9NRC8 400 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 FLNCQ14315 2725 aa12.67□□□□□ -0.38
COL25A1-201ENST00000399126 HMSDA8MTL9 139 aa12.66□□□□□ -0.38
COL25A1-201ENST00000399126 SHISA9B4DS77 424 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms