RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 RAB29O14966 203 aa12.6□□□□□ -0.39
RPRD1A-202ENST00000399022 KBTBD11O94819 623 aa12.6□□□□□ -0.39
RPRD1A-202ENST00000399022 S100A7P31151 101 aa12.6□□□□□ -0.39
RPRD1A-202ENST00000399022 TFPI2P48307 235 aa12.6□□□□□ -0.39
RPRD1A-202ENST00000399022 RPL24P83731 157 aaKnown RBP12.6□□□□□ -0.39
RPRD1A-202ENST00000399022 PAQR4Q8N4S7 273 aaPredicted RBP12.6□□□□□ -0.39
RPRD1A-202ENST00000399022 TAS2R45P59539 299 aa12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 SSPNQ14714 243 aa12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 P2RY6Q15077 328 aa12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 HIST3H3Q16695 136 aa12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 NUDT16L1Q9BRJ7 211 aaKnown RBP12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 WFDC1Q9HC57 220 aa12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 J3QR89 54 aa12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 SH2D1BO14796 132 aa12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 OR4A47Q6IF82 309 aa12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 TUSC5Q8IXB3 177 aa12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 ATOH7Q8N100 152 aa12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 DNASE2BQ8WZ79 361 aa12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 MOB3AQ96BX8 217 aa12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 PRDM6Q9NQX0 595 aa12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 HS3ST3B1Q9Y662 390 aa12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 HEATR5AQ86XA9 2040 aa12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 PMS2CLQ68D20 193 aa12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 CLDND2Q8NHS1 167 aa12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 RCC1LQ96I51 464 aaKnown RBP12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 SDF2L1Q9HCN8 221 aa12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 K7N7A8 449 aa12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 WNT5AP41221 380 aa12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 LRRC75AQ8NAA5 344 aa12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 DEFB108BQ8NET1 73 aa12.59□□□□□ -0.39
RPRD1A-202ENST00000399022 PDE6DO43924 150 aa12.58□□□□□ -0.4
RPRD1A-202ENST00000399022 MT-CO3P00414 261 aa12.58□□□□□ -0.4
RPRD1A-202ENST00000399022 F2RP25116 425 aa12.58□□□□□ -0.4
RPRD1A-202ENST00000399022 GPR12P47775 334 aa12.58□□□□□ -0.4
RPRD1A-202ENST00000399022 SUPT4H1P63272 117 aaKnown RBP12.58□□□□□ -0.4
RPRD1A-202ENST00000399022 FAM162BQ5T6X4 162 aa12.58□□□□□ -0.4
RPRD1A-202ENST00000399022 BTNL3Q6UXE8 466 aa12.58□□□□□ -0.4
RPRD1A-202ENST00000399022 ZNF664Q8N3J9 261 aa12.58□□□□□ -0.4
RPRD1A-202ENST00000399022 OR2J1Q9GZK6 312 aa12.58□□□□□ -0.4
RPRD1A-202ENST00000399022 POLDIP2Q9Y2S7 368 aa12.58□□□□□ -0.4
RPRD1A-202ENST00000399022 TRGV5A0A0B4J1U4 118 aa12.58□□□□□ -0.4
RPRD1A-202ENST00000399022 MAGEA5P43359 124 aa12.58□□□□□ -0.4
RPRD1A-202ENST00000399022 KIAA1644Q3SXP7 199 aa12.58□□□□□ -0.4
RPRD1A-202ENST00000399022 ARL6IP6Q8N6S5 226 aa12.58□□□□□ -0.4
RPRD1A-202ENST00000399022 RFESDQ8TAC1 157 aa12.58□□□□□ -0.4
RPRD1A-202ENST00000399022 GALMQ96C23 342 aa12.58□□□□□ -0.4
RPRD1A-202ENST00000399022 DLEU1O43261 78 aa12.58□□□□□ -0.4
RPRD1A-202ENST00000399022 IGHV2-5P01817 119 aa12.58□□□□□ -0.4
RPRD1A-202ENST00000399022 TAF15Q92804 592 aaKnown RBP eCLIP12.58□□□□□ -0.4
RPRD1A-202ENST00000399022 CENPFP49454 3210 aa12.58□□□□□ -0.4
RPRD1A-202ENST00000399022 BMPR1BO00238 502 aa12.57□□□□□ -0.4
RPRD1A-202ENST00000399022 SCTP09683 121 aa12.57□□□□□ -0.4
RPRD1A-202ENST00000399022 MEOX1P50221 254 aa12.57□□□□□ -0.4
RPRD1A-202ENST00000399022 SAP25Q8TEE9 199 aa12.57□□□□□ -0.4
RPRD1A-202ENST00000399022 SSMEM1Q8WWF3 244 aa12.57□□□□□ -0.4
RPRD1A-202ENST00000399022 B3GAT1Q9P2W7 334 aa12.57□□□□□ -0.4
RPRD1A-202ENST00000399022 RFNGQ9Y644 331 aa12.57□□□□□ -0.4
RPRD1A-202ENST00000399022 PHF3Q92576 2039 aaKnown RBP12.57□□□□□ -0.4
RPRD1A-202ENST00000399022 DOCK7Q96N67 2140 aa12.57□□□□□ -0.4
RPRD1A-202ENST00000399022 EREGO14944 169 aa12.57□□□□□ -0.4
RPRD1A-202ENST00000399022 FCER1GP30273 86 aa12.57□□□□□ -0.4
RPRD1A-202ENST00000399022 SRSF4Q08170 494 aaKnown RBP12.57□□□□□ -0.4
RPRD1A-202ENST00000399022 ZPBPQ9BS86 351 aa12.57□□□□□ -0.4
RPRD1A-202ENST00000399022 PMELP40967 661 aa12.57□□□□□ -0.4
RPRD1A-202ENST00000399022 MARS2Q96GW9 593 aaKnown RBP12.57□□□□□ -0.4
RPRD1A-202ENST00000399022 MRPL18Q9H0U6 180 aaKnown RBP12.57□□□□□ -0.4
RPRD1A-202ENST00000399022 OR8B8Q15620 311 aa12.57□□□□□ -0.4
RPRD1A-202ENST00000399022 CSRP2Q16527 193 aa12.57□□□□□ -0.4
RPRD1A-202ENST00000399022 SELENOHQ8IZQ5 122 aaKnown RBP12.57□□□□□ -0.4
RPRD1A-202ENST00000399022 OR8G5Q8NG78 346 aa12.57□□□□□ -0.4
RPRD1A-202ENST00000399022 ZCCHC14Q8WYQ9 949 aaKnown RBP12.57□□□□□ -0.4
RPRD1A-202ENST00000399022 CLN8Q9UBY8 286 aa12.57□□□□□ -0.4
RPRD1A-202ENST00000399022 HELZP42694 1942 aaKnown RBP12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 SHISA7A6NL88 538 aa12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 LYZL6O75951 148 aa12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 SFTPCP11686 197 aa12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 CBLN1P23435 193 aa12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 GNG3P63215 75 aa12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 ALKBH6Q3KRA9 238 aa12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 CYP2G1PQ6ZSU1 146 aa12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 ST6GALNAC3Q8NDV1 305 aa12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 EDARADDQ8WWZ3 215 aa12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 GPR146Q96CH1 333 aa12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 SPOCK3Q9BQ16 436 aa12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 GSX1Q9H4S2 264 aaPredicted RBP12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 WDR54Q9H977 334 aa12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 FZR1Q9UM11 496 aa12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 OR2W1Q9Y3N9 320 aa12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 IGLV3-19P01714 112 aa12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 SLC25A47Q6Q0C1 308 aa12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 TMEM38BQ9NVV0 291 aa12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 TTC28Q96AY4 2481 aa12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 ACACAQ13085 2346 aa12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 DEFB109BQ30KR1 87 aa12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 OR2D2Q9H210 308 aa12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 COLQQ9Y215 455 aaPredicted RBP12.56□□□□□ -0.4
RPRD1A-202ENST00000399022 RHOBP62745 196 aa12.55□□□□□ -0.4
RPRD1A-202ENST00000399022 SPEM2Q0P670 501 aa12.55□□□□□ -0.4
RPRD1A-202ENST00000399022 C10orf35Q96D05 121 aa12.55□□□□□ -0.4
RPRD1A-202ENST00000399022 CFHR1Q03591 330 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms