RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 TSPAN7P41732 249 aa8.4□□□□□ -1.07
PTCHD4-202ENST00000398738 OR3A1P47881 315 aa8.4□□□□□ -1.07
PTCHD4-202ENST00000398738 THBS3P49746 956 aa8.4□□□□□ -1.07
PTCHD4-202ENST00000398738 CCR5P51681 352 aa8.4□□□□□ -1.07
PTCHD4-202ENST00000398738 HBG1P69891 147 aa8.4□□□□□ -1.07
PTCHD4-202ENST00000398738 HBG2P69892 147 aa8.4□□□□□ -1.07
PTCHD4-202ENST00000398738 SHHQ15465 462 aa8.4□□□□□ -1.07
PTCHD4-202ENST00000398738 VN1R17PQ8TDU5 208 aa8.4□□□□□ -1.07
PTCHD4-202ENST00000398738 SYNGR3O43761 229 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 LORP23490 312 aaPredicted RBP8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 MPLP40238 635 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 FAM27BQ5VT28 67 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 ACSM6Q6P461 480 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 DPPA3Q6W0C5 159 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 CYP2G1PQ6ZSU1 146 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 AAED1Q7RTV5 226 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 MCEMP1Q8IX19 187 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 CISD2Q8N5K1 135 aaKnown RBP8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 ZIC4Q8N9L1 334 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 RNASEH2CQ8TDP1 164 aaKnown RBP8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 TMEM170AQ8WVE7 144 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 DIRC2Q96SL1 478 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 CLN8Q9UBY8 286 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 FREM1Q5H8C1 2179 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 EML6Q6ZMW3 1958 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 CXCL13O43927 109 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 C1QTNF9P0C862 333 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 COL8A2P25067 703 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 RAB35Q15286 201 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 ZNF808Q8N4W9 903 aaPredicted RBP8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 OR10G4Q8NGN3 311 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 OR10G9Q8NGN4 311 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 OR10G7Q8NGN6 311 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 PSMF1Q92530 271 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 TAF15Q92804 592 aaKnown RBP eCLIP8.39□□□□□ -1.073e-8■■■□□ 14.9
PTCHD4-202ENST00000398738 RAB40CQ96S21 281 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 OR6C3Q9NZP0 311 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 CLEC1BQ9P126 229 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 SVILO95425 2214 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 TRAV34A0A0B4J273 112 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 TCF21O43680 179 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 FAM87AP0C7U9 286 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 CRYGSP22914 178 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 IL3RAP26951 378 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 CARD18P57730 90 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 SRYQ05066 204 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 DAZAP2Q15038 168 aaPredicted RBP8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 GCSAMLQ5JQS6 135 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 FFAR4Q5NUL3 377 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 FAM53AQ6NSI3 398 aaPredicted RBP8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 TUBG2Q9NRH3 451 aa8.39□□□□□ -1.07
PTCHD4-202ENST00000398738 USF3Q68DE3 2245 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 TRAPPC2LH3BP13 241 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 SIRPB1O00241 398 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 IGKV1-39P01597 117 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 IGKV1D-39P04432 117 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 ZNF816Q0VGE8 651 aaPredicted RBP8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 SP5Q6BEB4 398 aaPredicted RBP8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 IGF2-ASQ6U949 168 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 OR5D13Q8NGL4 314 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 MBD3L1Q8WWY6 194 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 OR5P3Q8WZ94 311 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 CLDN23Q96B33 292 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 WDR61Q9GZS3 305 aaKnown RBP8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 MANBALQ9NQG1 85 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 PRDM6Q9NQX0 595 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 TCFL5Q9UL49 500 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 PTRH2Q9Y3E5 179 aaKnown RBP8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 TRAV1-1A0A0B4J248 108 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 H0Y980 276 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 TP53I11O14683 189 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 NDUFB4O95168 129 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 NAPSAO96009 420 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 TFF3Q07654 80 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 PRDX4Q13162 271 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 LRRC75BQ2VPJ9 315 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 C10orf128Q5T292 105 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 MKXQ8IYA7 352 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 GBGT1Q8N5D6 347 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 SGMS2Q8NHU3 365 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 TMEM54Q969K7 222 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 FOXB1Q99853 325 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 MTCH1Q9NZJ7 389 aa8.38□□□□□ -1.07
PTCHD4-202ENST00000398738 IGHV1OR15-9A0A0B4J2B8 117 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 hCG_38984A0A1B0GV85 526 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 C5orf49A4QMS7 147 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 MARCH11A6NNE9 402 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 C11orf94C9JXX5 98 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 DLEU1O43261 78 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 IGKV1-5P01602 117 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 SFTPCP11686 197 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 PAX1P15863 534 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 TNFSF10P50591 281 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 HIST1H3AP68431 136 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 KIR3DS1Q14943 382 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 DNLZQ5SXM8 178 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 ABLIM2Q6H8Q1 611 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 KCNIP4Q6PIL6 250 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 DTD1Q8TEA8 209 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 C10orf35Q96D05 121 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms