RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 VAMP8Q9BV40 100 aa8.65□□□□□ -1.02
HMGCLL1-205ENST00000398661 MED29Q9NX70 200 aa8.65□□□□□ -1.02
HMGCLL1-205ENST00000398661 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.65□□□□□ -1.02
HMGCLL1-205ENST00000398661 IGHV3-15A0A0B4J1V0 119 aa8.65□□□□□ -1.02
HMGCLL1-205ENST00000398661 SLC33A1O00400 549 aaPredicted RBP8.65□□□□□ -1.02
HMGCLL1-205ENST00000398661 ADAM20O43506 726 aa8.65□□□□□ -1.02
HMGCLL1-205ENST00000398661 TNFSF12O43508 249 aa8.65□□□□□ -1.02
HMGCLL1-205ENST00000398661 FCGR2AP12318 317 aa8.65□□□□□ -1.02
HMGCLL1-205ENST00000398661 CD33P20138 364 aa8.65□□□□□ -1.02
HMGCLL1-205ENST00000398661 CEACAM8P31997 349 aaPredicted RBP8.65□□□□□ -1.02
HMGCLL1-205ENST00000398661 Q6ZWC4 215 aa8.65□□□□□ -1.02
HMGCLL1-205ENST00000398661 ZNF695Q8IW36 515 aa8.65□□□□□ -1.02
HMGCLL1-205ENST00000398661 FDCSPQ8NFU4 85 aa8.65□□□□□ -1.02
HMGCLL1-205ENST00000398661 ORAOV1Q8WV07 137 aa8.65□□□□□ -1.02
HMGCLL1-205ENST00000398661 MOB3AQ96BX8 217 aa8.65□□□□□ -1.02
HMGCLL1-205ENST00000398661 RPUSD4Q96CM3 377 aaKnown RBP8.65□□□□□ -1.02
HMGCLL1-205ENST00000398661 RSG1Q9BU20 258 aa8.65□□□□□ -1.02
HMGCLL1-205ENST00000398661 TRAPPC1Q9Y5R8 145 aa8.65□□□□□ -1.02
HMGCLL1-205ENST00000398661 FAM166BA8MTA8 275 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 A8MXE2 369 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 CHST1O43916 411 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 ZNF737O75373 536 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 TRAPPC6AO75865 159 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 NXPH2O95156 264 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 DTYMKP23919 212 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 GCH1P30793 250 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 RPL15P61313 204 aaKnown RBP8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 RIPPLY2Q5TAB7 128 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 KCNIP4Q6PIL6 250 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 CMTM2Q8TAZ6 248 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 Q96M66 194 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 TMEM222Q9H0R3 208 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 GSX1Q9H4S2 264 aaPredicted RBP8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 MANBALQ9NQG1 85 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 POLR1DQ9Y2S0 133 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 PPIAL4AQ9Y536 164 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 LHFPL6Q9Y693 200 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 IGSF10Q6WRI0 2623 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 C21orf140B9A014 251 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 MPPED1O15442 326 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 NXPH3O95157 252 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 SERPINA7P05543 415 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 ID3Q02535 119 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 POU3F1Q03052 451 aaPredicted RBP8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 ZP4Q12836 540 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 MMDQ15546 238 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 UEVLDQ8IX04 471 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 SELENOHQ8IZQ5 122 aaKnown RBP8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 SCGB1C1Q8TD33 95 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 TECTBQ96PL2 329 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 CIB3Q96Q77 187 aaPredicted RBP8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 ALKBH3Q96Q83 286 aaPredicted RBP8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 PLK3Q9H4B4 646 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 RNF150Q9ULK6 438 aa8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 UBE2J1Q9Y385 318 aaPredicted RBP8.64□□□□□ -1.03
HMGCLL1-205ENST00000398661 ZNF814B7Z6K7 855 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 NEURL1O76050 574 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 IL3RAP26951 378 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 CYB561P49447 251 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 PAX9P55771 341 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 TPPP2P59282 170 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 HERV-K104P61576 105 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 LCN2P80188 198 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 MEF2BQ02080 365 aaPredicted RBP8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 C3AR1Q16581 482 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 TMEM41BQ5BJD5 291 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 RAET1LQ5VY80 246 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 ZGRF1Q86YA3 2104 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 STPG4Q8N801 248 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 TMEM56Q96MV1 263 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 RNF115Q9Y4L5 304 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 PXMP4Q9Y6I8 212 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 TMEM56-RWDD3S4R434 201 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 UTP20O75691 2785 aaKnown RBP8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 POLEQ07864 2286 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 AQP7O14520 342 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 GYPAP02724 150 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 OR5G3P0C626 314 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 AADACP22760 399 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 MDH2P40926 338 aaKnown RBP8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 NPBWR2P48146 333 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 PAFAH1B2P68402 229 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 C17orf67Q0P5P2 114 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 ATP6V1FQ16864 119 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 ACSF3Q4G176 576 aaPredicted RBP8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 ABHD17BQ5VST6 288 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 FAM180AQ6UWF9 173 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 CALHM1Q8IU99 346 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 PLPPR1Q8TBJ4 325 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 VN1R17PQ8TDU5 208 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 PIGTQ969N2 578 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 WDYHV1Q96HA8 205 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 ALKBH7Q9BT30 221 aaPredicted RBP8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 EMC6Q9BV81 110 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 REPIN1Q9BWE0 567 aaKnown RBP8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 PARLQ9H300 379 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 ZNF286AQ9HBT8 521 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 SPTBN1Q01082 2364 aaKnown RBP8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 USP24Q9UPU5 2620 aa8.63□□□□□ -1.03
HMGCLL1-205ENST00000398661 FLNCQ14315 2725 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms