RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 OR4C45A6NMZ5 311 aa12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 HIST3H3Q16695 136 aa12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 TMEM183BQ1AE95 376 aa12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 PRSS33Q8NF86 280 aa12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 ANGPTL6Q8NI99 470 aa12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 SIGLEC12Q96PQ1 595 aa12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 NPIPB8E9PQR5 432 aa12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 ZNF253O75346 499 aa12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 MBPP02686 304 aaPredicted RBP12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 FAM216AQ8WUB2 273 aa12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 RGS13O14921 159 aa12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 RPL29P47914 159 aaKnown RBP12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 HERVK_113P61574 105 aa12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 OR4B1Q8NGF8 309 aa12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 ISOC2Q96AB3 205 aa12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 GPA33Q99795 319 aa12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 CRHP06850 196 aa12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 RBM11P57052 281 aaKnown RBP12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 TWIST1Q15672 202 aa12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 CEBPEQ15744 281 aa12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 STXBP6Q8NFX7 210 aa12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 METTL26Q96S19 204 aa12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 CXCL3P19876 107 aa12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 HLA-DRB5Q30154 266 aa12.29□□□□□ -0.44
PCDHA11-201ENST00000398640 CTDSPLO15194 276 aa12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 CRISP2P16562 243 aa12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 NBL1P41271 181 aa12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 SURF2Q15527 256 aaPredicted RBP12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 LINC00596Q86U02 117 aa12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 TCTEX1D1Q8N7M0 179 aa12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 ZNF738Q8NE65 137 aa12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 ADIPOR1Q96A54 375 aa12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 ZDHHC8Q9ULC8 765 aa12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 SMIM10L1P0DMW3 83 aa12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 LCN2P80188 198 aa12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 GBGT1Q8N5D6 347 aa12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 SMIM10Q96HG1 83 aa12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 GPX7Q96SL4 187 aaPredicted RBP12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 NEURL2Q9BR09 285 aa12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 NUDT16L1Q9BRJ7 211 aaKnown RBP12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 Q9N2K0 584 aa12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 SS18L1O75177 396 aaPredicted RBP12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 HSD17B13Q7Z5P4 300 aaPredicted RBP12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 SLC35E3Q7Z769 313 aa12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 OR2T10Q8NGZ9 312 aa12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 MAP1LC3CQ9BXW4 147 aa12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 MARVELD1Q9BSK0 173 aa12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 PLAUP00749 431 aa12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 HBZP02008 142 aa12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 DLK1P80370 383 aa12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 IGSF11Q5DX21 431 aa12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 NFAM1Q8NET5 270 aaPredicted RBP12.28□□□□□ -0.44
PCDHA11-201ENST00000398640 KIR2DL2P43627 348 aaPredicted RBP12.27□□□□□ -0.44
PCDHA11-201ENST00000398640 KIR3DL2P43630 455 aa12.27□□□□□ -0.44
PCDHA11-201ENST00000398640 IZUMO4Q1ZYL8 232 aa12.27□□□□□ -0.44
PCDHA11-201ENST00000398640 ACSF3Q4G176 576 aaPredicted RBP12.27□□□□□ -0.44
PCDHA11-201ENST00000398640 SMIM12Q96EX1 92 aa12.27□□□□□ -0.44
PCDHA11-201ENST00000398640 PHYHIPLQ96FC7 376 aa12.27□□□□□ -0.44
PCDHA11-201ENST00000398640 TLNRD1Q9H1K6 362 aa12.27□□□□□ -0.44
PCDHA11-201ENST00000398640 MIXL1Q9H2W2 232 aa12.27□□□□□ -0.44
PCDHA11-201ENST00000398640 IGHV1-69-2A0A0G2JMI3 117 aa12.27□□□□□ -0.45
PCDHA11-201ENST00000398640 H3BVH4 76 aa12.27□□□□□ -0.45
PCDHA11-201ENST00000398640 TNFSF10P50591 281 aa12.27□□□□□ -0.45
PCDHA11-201ENST00000398640 OR11H7Q8NGC8 314 aa12.27□□□□□ -0.45
PCDHA11-201ENST00000398640 OR4C46A6NHA9 309 aa12.27□□□□□ -0.45
PCDHA11-201ENST00000398640 DHRS7CA6NNS2 312 aa12.27□□□□□ -0.45
PCDHA11-201ENST00000398640 CXorf1O96002 111 aa12.27□□□□□ -0.45
PCDHA11-201ENST00000398640 DLX1P56177 255 aa12.27□□□□□ -0.45
PCDHA11-201ENST00000398640 KLF9Q13886 244 aaPredicted RBP12.27□□□□□ -0.45
PCDHA11-201ENST00000398640 MYOZ3Q8TDC0 251 aa12.27□□□□□ -0.45
PCDHA11-201ENST00000398640 LEAP2Q969E1 77 aa12.27□□□□□ -0.45
PCDHA11-201ENST00000398640 MIOXQ9UGB7 285 aa12.27□□□□□ -0.45
PCDHA11-201ENST00000398640 CCL27Q9Y4X3 112 aa12.27□□□□□ -0.45
PCDHA11-201ENST00000398640 TRBV5-3A0A0A0MS03 114 aa12.27□□□□□ -0.45
PCDHA11-201ENST00000398640 IER3P46695 156 aa12.27□□□□□ -0.45
PCDHA11-201ENST00000398640 SRSF9Q13242 221 aaKnown RBP eCLIP12.27□□□□□ -0.45
PCDHA11-201ENST00000398640 AWAT1Q58HT5 328 aa12.27□□□□□ -0.45
PCDHA11-201ENST00000398640 SCMH1Q96GD3 660 aa12.27□□□□□ -0.45
PCDHA11-201ENST00000398640 PAXXQ9BUH6 204 aa12.27□□□□□ -0.45
PCDHA11-201ENST00000398640 CEACAM21Q3KPI0 293 aa12.27□□□□□ -0.45
PCDHA11-201ENST00000398640 RLFQ13129 1914 aa12.26□□□□□ -0.45
PCDHA11-201ENST00000398640 TDRD6O60522 2096 aaKnown RBP12.26□□□□□ -0.45
PCDHA11-201ENST00000398640 LEUTXA8MZ59 168 aa12.26□□□□□ -0.45
PCDHA11-201ENST00000398640 OR2H2O95918 312 aa12.26□□□□□ -0.45
PCDHA11-201ENST00000398640 OR4A5Q8NH83 315 aa12.26□□□□□ -0.45
PCDHA11-201ENST00000398640 TIMP4Q99727 224 aa12.26□□□□□ -0.45
PCDHA11-201ENST00000398640 VAX2Q9UIW0 290 aa12.26□□□□□ -0.45
PCDHA11-201ENST00000398640 CLDN18P56856 261 aa12.26□□□□□ -0.45
PCDHA11-201ENST00000398640 NCMAPQ5T1S8 102 aa12.26□□□□□ -0.45
PCDHA11-201ENST00000398640 OR10J6PQ8NGY7 276 aa12.26□□□□□ -0.45
PCDHA11-201ENST00000398640 ANAPC16Q96DE5 110 aa12.26□□□□□ -0.45
PCDHA11-201ENST00000398640 MYOFQ9NZM1 2061 aa12.26□□□□□ -0.45
PCDHA11-201ENST00000398640 A0A1B0GU03 582 aa12.26□□□□□ -0.45
PCDHA11-201ENST00000398640 hCG_38984A0A1B0GV85 526 aa12.26□□□□□ -0.45
PCDHA11-201ENST00000398640 CIDEAO60543 219 aa12.26□□□□□ -0.45
PCDHA11-201ENST00000398640 PRSS53Q2L4Q9 553 aa12.26□□□□□ -0.45
PCDHA11-201ENST00000398640 LGALSLQ3ZCW2 172 aaPredicted RBP12.26□□□□□ -0.45
PCDHA11-201ENST00000398640 DDB2Q92466 427 aa12.26□□□□□ -0.45
PCDHA11-201ENST00000398640 PTX4Q96A99 478 aa12.26□□□□□ -0.45
PCDHA11-201ENST00000398640 SRXN1Q9BYN0 137 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms