RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 ERVK11-1P61568 191 aa11.18□□□□□ -0.62
CCBE1-201ENST00000398179 ZNF816Q0VGE8 651 aaPredicted RBP11.18□□□□□ -0.62
CCBE1-201ENST00000398179 LOC107986453A0A1B0GWG9 222 aa11.18□□□□□ -0.62
CCBE1-201ENST00000398179 GZMBP10144 247 aa11.18□□□□□ -0.62
CCBE1-201ENST00000398179 ZNF121P58317 390 aaPredicted RBP11.18□□□□□ -0.62
CCBE1-201ENST00000398179 R4GN57 208 aa11.18□□□□□ -0.62
CCBE1-201ENST00000398179 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.18□□□□□ -0.62
CCBE1-201ENST00000398179 NDUFC2-KCTD14E9PQ53 114 aa11.18□□□□□ -0.62
CCBE1-201ENST00000398179 UTF1Q5T230 341 aa11.18□□□□□ -0.62
CCBE1-201ENST00000398179 IGF2-ASQ6U949 168 aa11.18□□□□□ -0.62
CCBE1-201ENST00000398179 SDHCQ99643 169 aaPredicted RBP11.18□□□□□ -0.62
CCBE1-201ENST00000398179 NRN1Q9NPD7 142 aa11.18□□□□□ -0.62
CCBE1-201ENST00000398179 MYH10P35580 1976 aa11.17□□□□□ -0.62
CCBE1-201ENST00000398179 TRAV1-2A0A0B4J238 106 aa11.17□□□□□ -0.62
CCBE1-201ENST00000398179 NDUFB4O95168 129 aa11.17□□□□□ -0.62
CCBE1-201ENST00000398179 CSN3P07498 182 aa11.17□□□□□ -0.62
CCBE1-201ENST00000398179 MRPS11P82912 194 aaKnown RBP11.17□□□□□ -0.62
CCBE1-201ENST00000398179 KIR3DS1Q14943 382 aa11.17□□□□□ -0.62
CCBE1-201ENST00000398179 TMEM255BQ8WV15 326 aa11.17□□□□□ -0.62
CCBE1-201ENST00000398179 RASL11BQ9BPW5 248 aa11.17□□□□□ -0.62
CCBE1-201ENST00000398179 HDHD3Q9BSH5 251 aaPredicted RBP11.17□□□□□ -0.62
CCBE1-201ENST00000398179 WNT6Q9Y6F9 365 aa11.17□□□□□ -0.62
CCBE1-201ENST00000398179 MYH7BA7E2Y1 1941 aa11.17□□□□□ -0.62
CCBE1-201ENST00000398179 TMSB15BA0A087X1C1 80 aa11.17□□□□□ -0.62
CCBE1-201ENST00000398179 FAM231BA6NCW3 169 aa11.17□□□□□ -0.62
CCBE1-201ENST00000398179 NPFFO15130 113 aa11.17□□□□□ -0.62
CCBE1-201ENST00000398179 WNT1P04628 370 aa11.17□□□□□ -0.62
CCBE1-201ENST00000398179 ZNF324BQ6AW86 544 aaPredicted RBP11.17□□□□□ -0.62
CCBE1-201ENST00000398179 CSDC2Q9Y534 153 aaKnown RBP11.17□□□□□ -0.62
CCBE1-201ENST00000398179 LSM10Q969L4 123 aaKnown RBP11.17□□□□□ -0.62
CCBE1-201ENST00000398179 AAMDCQ9H7C9 122 aa11.17□□□□□ -0.62
CCBE1-201ENST00000398179 UBR1Q8IWV7 1749 aa11.17□□□□□ -0.62
CCBE1-201ENST00000398179 IGKV6D-41A0A0C4DH26 115 aa11.17□□□□□ -0.62
CCBE1-201ENST00000398179 HOXD9P28356 352 aaPredicted RBP11.17□□□□□ -0.62
CCBE1-201ENST00000398179 UNC119Q13432 240 aa11.17□□□□□ -0.62
CCBE1-201ENST00000398179 C1orf174Q8IYL3 243 aa11.17□□□□□ -0.62
CCBE1-201ENST00000398179 A0A0U1RQS6 177 aa11.16□□□□□ -0.62
CCBE1-201ENST00000398179 ZNF865P0CJ78 1059 aaPredicted RBP11.16□□□□□ -0.62
CCBE1-201ENST00000398179 RPS15AP62244 130 aaKnown RBP11.16□□□□□ -0.62
CCBE1-201ENST00000398179 OR2L13Q8N349 312 aa11.16□□□□□ -0.62
CCBE1-201ENST00000398179 DEFB119Q8N690 84 aa11.16□□□□□ -0.62
CCBE1-201ENST00000398179 DUOX1Q9NRD9 1551 aa11.16□□□□□ -0.62
CCBE1-201ENST00000398179 FAM208AQ9UK61 1670 aaKnown RBP11.16□□□□□ -0.62
CCBE1-201ENST00000398179 ELNP15502 786 aa11.16□□□□□ -0.62
CCBE1-201ENST00000398179 MON2Q7Z3U7 1717 aa11.16□□□□□ -0.62
CCBE1-201ENST00000398179 IGHV2OR16-5A0A0B4J2B6 119 aa11.16□□□□□ -0.62
CCBE1-201ENST00000398179 SOD1P00441 154 aa11.16□□□□□ -0.62
CCBE1-201ENST00000398179 SIRPAP78324 504 aa11.16□□□□□ -0.62
CCBE1-201ENST00000398179 GTSCR1Q86UQ5 136 aa11.16□□□□□ -0.62
CCBE1-201ENST00000398179 RPS4Y2Q8TD47 263 aa11.16□□□□□ -0.62
CCBE1-201ENST00000398179 C8orf44Q96CB5 159 aa11.16□□□□□ -0.62
CCBE1-201ENST00000398179 TMEM30AQ9NV96 361 aa11.16□□□□□ -0.62
CCBE1-201ENST00000398179 PPP1R17O96001 155 aa11.16□□□□□ -0.62
CCBE1-201ENST00000398179 IL1RNP18510 177 aa11.16□□□□□ -0.62
CCBE1-201ENST00000398179 KLRD1Q13241 179 aa11.16□□□□□ -0.62
CCBE1-201ENST00000398179 C20orf141Q9NUB4 165 aa11.16□□□□□ -0.62
CCBE1-201ENST00000398179 TAAR2Q9P1P5 351 aa11.16□□□□□ -0.62
CCBE1-201ENST00000398179 COL5A2P05997 1499 aaPredicted RBP11.16□□□□□ -0.62
CCBE1-201ENST00000398179 TEX36Q5VZQ5 186 aa11.16□□□□□ -0.62
CCBE1-201ENST00000398179 RND1Q92730 232 aa11.16□□□□□ -0.62
CCBE1-201ENST00000398179 SIGLEC12Q96PQ1 595 aa11.16□□□□□ -0.62
CCBE1-201ENST00000398179 K7EN84 100 aa11.15□□□□□ -0.62
CCBE1-201ENST00000398179 SRIP30626 198 aa11.15□□□□□ -0.62
CCBE1-201ENST00000398179 IHHQ14623 411 aa11.15□□□□□ -0.62
CCBE1-201ENST00000398179 HAPLN4Q86UW8 402 aa11.15□□□□□ -0.62
CCBE1-201ENST00000398179 CDRT4Q8N9R6 151 aa11.15□□□□□ -0.62
CCBE1-201ENST00000398179 OR51G1Q8NGK1 321 aa11.15□□□□□ -0.62
CCBE1-201ENST00000398179 MYADMQ96S97 322 aa11.15□□□□□ -0.62
CCBE1-201ENST00000398179 GRIFINA4D1Z8 144 aa11.15□□□□□ -0.62
CCBE1-201ENST00000398179 TMEM167BQ9NRX6 74 aa11.15□□□□□ -0.62
CCBE1-201ENST00000398179 ZNF443Q9Y2A4 671 aaPredicted RBP11.15□□□□□ -0.62
CCBE1-201ENST00000398179 CDKN1AP38936 164 aa11.15□□□□□ -0.62
CCBE1-201ENST00000398179 SPEM2Q0P670 501 aa11.15□□□□□ -0.62
CCBE1-201ENST00000398179 RBPMS2Q6ZRY4 209 aaKnown RBP11.15□□□□□ -0.62
CCBE1-201ENST00000398179 CFHR5Q9BXR6 569 aa11.15□□□□□ -0.62
CCBE1-201ENST00000398179 MSRB2Q9Y3D2 182 aa11.15□□□□□ -0.62
CCBE1-201ENST00000398179 A0A1W2PPC1 479 aa11.15□□□□□ -0.62
CCBE1-201ENST00000398179 CD160O95971 181 aa11.15□□□□□ -0.62
CCBE1-201ENST00000398179 RBX1P62877 108 aa11.15□□□□□ -0.62
CCBE1-201ENST00000398179 UMODL1-AS1Q8N2C9 162 aa11.15□□□□□ -0.62
CCBE1-201ENST00000398179 NEIL2Q969S2 332 aa11.15□□□□□ -0.62
CCBE1-201ENST00000398179 GGTLC3B5MD39 225 aa11.15□□□□□ -0.63
CCBE1-201ENST00000398179 PIGCQ92535 297 aa11.15□□□□□ -0.63
CCBE1-201ENST00000398179 BMFQ96LC9 184 aa11.15□□□□□ -0.63
CCBE1-201ENST00000398179 IMMP2LQ96T52 175 aa11.15□□□□□ -0.63
CCBE1-201ENST00000398179 LSM2Q9Y333 95 aaKnown RBP11.15□□□□□ -0.63
CCBE1-201ENST00000398179 H3BMM0 161 aa11.14□□□□□ -0.63
CCBE1-201ENST00000398179 IL3RAP26951 378 aa11.14□□□□□ -0.63
CCBE1-201ENST00000398179 CNTFRP26992 372 aa11.14□□□□□ -0.63
CCBE1-201ENST00000398179 RPS23P62266 143 aaKnown RBP11.14□□□□□ -0.63
CCBE1-201ENST00000398179 MAVSQ7Z434 540 aa11.14□□□□□ -0.63
CCBE1-201ENST00000398179 C10orf111Q8N326 155 aa11.14□□□□□ -0.63
CCBE1-201ENST00000398179 KHSRPQ92945 711 aaKnown RBP eCLIP11.14□□□□□ -0.63
CCBE1-201ENST00000398179 UBE2WQ96B02 151 aa11.14□□□□□ -0.63
CCBE1-201ENST00000398179 HMGN2P05204 90 aaKnown RBP11.14□□□□□ -0.63
CCBE1-201ENST00000398179 VSIG10L2P0DP72 767 aa11.14□□□□□ -0.63
CCBE1-201ENST00000398179 ID3Q02535 119 aa11.14□□□□□ -0.63
CCBE1-201ENST00000398179 DCAF12L2Q5VW00 463 aa11.14□□□□□ -0.63
CCBE1-201ENST00000398179 ZNF414Q96IQ9 312 aa11.14□□□□□ -0.63
CCBE1-201ENST00000398179 PNLIPP16233 465 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms