RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 FGF12P61328 243 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 PCBD1P61457 104 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 MEF2BQ02080 365 aaPredicted RBP7.8□□□□□ -1.16
CAPN3-206ENST00000397163 OR51G1Q8NGK1 321 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 PINX1Q96BK5 328 aaKnown RBP7.8□□□□□ -1.16
CAPN3-206ENST00000397163 OR4C12Q96R67 309 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 PATZ1Q9HBE1 687 aaKnown RBP7.8□□□□□ -1.16
CAPN3-206ENST00000397163 RBM7Q9Y580 266 aaKnown RBP7.8□□□□□ -1.16
CAPN3-206ENST00000397163 FAM90A10PA6NDY2 464 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 FAM90A18PA6NE21 464 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 FAM90A16PA6NEW6 464 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 FAM90A20PA6NIJ5 464 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 FAM90A8PA6NJQ4 464 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 FAM90A7PA6NKC0 464 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 FAM90A22PA8MWA6 464 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 KIAA1324LA8MWY0 1029 aaPredicted RBP7.8□□□□□ -1.16
CAPN3-206ENST00000397163 FAM90A12PA8MX19 464 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 FAM90A5PA8MXJ8 464 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 FAM90A23PA8MXZ1 464 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 TRAPPC2LH3BP13 241 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 KBTBD11O94819 623 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 IGHEP01854 428 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 FAM90A15PP0C7V4 464 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 FAM90A13PP0C7W8 464 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 FAM90A14PP0C7W9 464 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 FAM90A24PP0C7X0 464 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 RPL23P62829 140 aaKnown RBP7.8□□□□□ -1.16
CAPN3-206ENST00000397163 LRRC75BQ2VPJ9 315 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 NUFIP2Q7Z417 695 aaKnown RBP7.8□□□□□ -1.16
CAPN3-206ENST00000397163 YRDCQ86U90 279 aaKnown RBP7.8□□□□□ -1.16
CAPN3-206ENST00000397163 STPG4Q8N801 248 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 OR1K1Q8NGR3 316 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 PYGO2Q9BRQ0 406 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 SF3B5Q9BWJ5 86 aaKnown RBP7.8□□□□□ -1.16
CAPN3-206ENST00000397163 OR2W1Q9Y3N9 320 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 GJE1A6NN92 205 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 HS3ST1O14792 307 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 LILRA1O75019 489 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 IGHV3-9P01782 118 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 CRYABP02511 175 aaKnown RBP7.8□□□□□ -1.16
CAPN3-206ENST00000397163 PSMB3P49720 205 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 CARD18P57730 90 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 RAC3P60763 192 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 PRDX4Q13162 271 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 SRSF7Q16629 238 aaKnown RBP eCLIP7.8□□□□□ -1.16
CAPN3-206ENST00000397163 LEMD1Q68G75 181 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 OR8G2PQ6IF36 304 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 HAPLN4Q86UW8 402 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 TGIF2LYQ8IUE0 185 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 MKXQ8IYA7 352 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 GATAD1Q8WUU5 269 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 ZCCHC14Q8WYQ9 949 aaKnown RBP7.8□□□□□ -1.16
CAPN3-206ENST00000397163 RDH5Q92781 318 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 CLDN23Q96B33 292 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 ACY3Q96HD9 319 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 CIB3Q96Q77 187 aaPredicted RBP7.8□□□□□ -1.16
CAPN3-206ENST00000397163 MIEN1Q9BRT3 115 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 PARD6GQ9BYG4 376 aaPredicted RBP7.8□□□□□ -1.16
CAPN3-206ENST00000397163 WDR61Q9GZS3 305 aaKnown RBP7.8□□□□□ -1.16
CAPN3-206ENST00000397163 OR51I2Q9H344 312 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 ZFP30Q9Y2G7 519 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 YLPM1P49750 1951 aaKnown RBP7.79□□□□□ -1.16
CAPN3-206ENST00000397163 PIGBOS1A0A0B4J2F0 54 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 CXCL13O43927 109 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 UMODP07911 640 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 SLC25A6P12236 298 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 SPINK2P20155 84 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 CCKARP32238 428 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 COA6Q5JTJ3 125 aaKnown RBP7.79□□□□□ -1.16
CAPN3-206ENST00000397163 ACTL10Q5JWF8 245 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 FAM78BQ5VT40 261 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 ZNF709Q8N972 641 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 CADM4Q8NFZ8 388 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 OR4F5Q8NH21 305 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 MRPL30Q8TCC3 161 aaKnown RBP7.79□□□□□ -1.16
CAPN3-206ENST00000397163 OR4F4Q96R69 305 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 FAM103A1Q9BTL3 118 aaKnown RBP7.79□□□□□ -1.16
CAPN3-206ENST00000397163 SLC25A22Q9H936 323 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 PPP1R3CQ9UQK1 317 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 NDUFB8O95169 186 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 HRASP01112 189 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 EGR1P18146 543 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 PCOLCEQ15113 449 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 RNPS1Q15287 305 aaKnown RBP7.79□□□□□ -1.16
CAPN3-206ENST00000397163 KRTAP27-1Q3LI81 207 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 COL5A1-AS1Q5SY13 56 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 PCSK4Q6UW60 755 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 Q6ZWC4 215 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 PSMF1Q92530 271 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 TAF15Q92804 592 aaKnown RBP eCLIP7.79□□□□□ -1.16
CAPN3-206ENST00000397163 AGMATQ9BSE5 352 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 VAMP8Q9BV40 100 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 PARLQ9H300 379 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 GPR35Q9HC97 309 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 MTCH1Q9NZJ7 389 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 KCNS2Q9ULS6 477 aa7.79□□□□□ -1.16
CAPN3-206ENST00000397163 PDLIM4P50479 330 aa7.78□□□□□ -1.16
CAPN3-206ENST00000397163 SSR4P51571 173 aa7.78□□□□□ -1.16
CAPN3-206ENST00000397163 SLC38A11Q08AI6 406 aa7.78□□□□□ -1.16
CAPN3-206ENST00000397163 ACSF3Q4G176 576 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms