RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 PCP4P48539 62 aa12.18□□□□□ -0.46
COL4A3-202ENST00000396578 DLX6P56179 175 aa12.18□□□□□ -0.46
COL4A3-202ENST00000396578 TINAGQ9UJW2 476 aa12.18□□□□□ -0.46
COL4A3-202ENST00000396578 AKAP6Q13023 2319 aa12.18□□□□□ -0.46
COL4A3-202ENST00000396578 ZNF79Q15937 498 aa12.18□□□□□ -0.46
COL4A3-202ENST00000396578 WDR25Q64LD2 544 aaPredicted RBP12.18□□□□□ -0.46
COL4A3-202ENST00000396578 ZNF645Q8N7E2 425 aa12.18□□□□□ -0.46
COL4A3-202ENST00000396578 TMEM45BQ96B21 275 aa12.18□□□□□ -0.46
COL4A3-202ENST00000396578 GPR35Q9HC97 309 aa12.18□□□□□ -0.46
COL4A3-202ENST00000396578 ZNF506Q5JVG8 444 aa12.18□□□□□ -0.46
COL4A3-202ENST00000396578 TRBV9A0A0B4J1U6 114 aa12.18□□□□□ -0.46
COL4A3-202ENST00000396578 ALX4Q9H161 411 aaPredicted RBP12.18□□□□□ -0.46
COL4A3-202ENST00000396578 IL4P05112 153 aa12.18□□□□□ -0.46
COL4A3-202ENST00000396578 RBM11P57052 281 aaKnown RBP12.18□□□□□ -0.46
COL4A3-202ENST00000396578 COL10A1Q03692 680 aa12.18□□□□□ -0.46
COL4A3-202ENST00000396578 KRTCAP3Q53RY4 240 aa12.18□□□□□ -0.46
COL4A3-202ENST00000396578 NUP37Q8NFH4 326 aa12.18□□□□□ -0.46
COL4A3-202ENST00000396578 OR8G5Q8NG78 346 aa12.18□□□□□ -0.46
COL4A3-202ENST00000396578 SMIM13P0DJ93 91 aa12.17□□□□□ -0.46
COL4A3-202ENST00000396578 MGAT2Q10469 447 aa12.17□□□□□ -0.46
COL4A3-202ENST00000396578 ISXQ2M1V0 245 aa12.17□□□□□ -0.46
COL4A3-202ENST00000396578 C2orf83Q53S99 150 aa12.17□□□□□ -0.46
COL4A3-202ENST00000396578 DEFB123Q8N688 67 aa12.17□□□□□ -0.46
COL4A3-202ENST00000396578 RASL10BQ96S79 203 aa12.17□□□□□ -0.46
COL4A3-202ENST00000396578 DSPPQ9NZW4 1301 aa12.17□□□□□ -0.46
COL4A3-202ENST00000396578 VSIG8P0DPA2 414 aa12.17□□□□□ -0.46
COL4A3-202ENST00000396578 LOXL3P58215 753 aa12.17□□□□□ -0.46
COL4A3-202ENST00000396578 RPS20P60866 119 aaKnown RBP12.17□□□□□ -0.46
COL4A3-202ENST00000396578 VAX1Q5SQQ9 334 aa12.17□□□□□ -0.46
COL4A3-202ENST00000396578 OR10S1Q8NGN2 331 aa12.17□□□□□ -0.46
COL4A3-202ENST00000396578 HMGCLL1Q8TB92 370 aa12.17□□□□□ -0.46
COL4A3-202ENST00000396578 CACNA1IQ9P0X4 2223 aa12.17□□□□□ -0.46
COL4A3-202ENST00000396578 STPG3Q8N7X2 389 aa12.17□□□□□ -0.46
COL4A3-202ENST00000396578 QSER1Q2KHR3 1735 aa12.17□□□□□ -0.46
COL4A3-202ENST00000396578 PNLIPP16233 465 aa12.17□□□□□ -0.46
COL4A3-202ENST00000396578 SPINK2P20155 84 aa12.17□□□□□ -0.46
COL4A3-202ENST00000396578 RPL31P62899 125 aaKnown RBP12.17□□□□□ -0.46
COL4A3-202ENST00000396578 SGK494Q96LW2 274 aa12.17□□□□□ -0.46
COL4A3-202ENST00000396578 WNT5BQ9H1J7 359 aa12.17□□□□□ -0.46
COL4A3-202ENST00000396578 WNT9BO14905 357 aa12.17□□□□□ -0.46
COL4A3-202ENST00000396578 SELENOTP62341 195 aa12.17□□□□□ -0.46
COL4A3-202ENST00000396578 RND1Q92730 232 aa12.17□□□□□ -0.46
COL4A3-202ENST00000396578 HOXB3P14651 431 aaPredicted RBP12.16□□□□□ -0.46
COL4A3-202ENST00000396578 TEX30Q5JUR7 227 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 HDHD3Q9BSH5 251 aaPredicted RBP12.16□□□□□ -0.46
COL4A3-202ENST00000396578 OR5AC2Q9NZP5 309 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 A0A1W2PS18 150 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 LINC01565O15544 149 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 PQLC2Q6ZP29 291 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 TCF24Q7RTU0 167 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 MBD3L1Q8WWY6 194 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 GALNT14Q96FL9 552 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 FLRT3Q9NZU0 649 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 MPDZO75970 2070 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 SLC25A17O43808 307 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 TMEM177Q53S58 311 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 TUBD1Q9UJT1 453 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 ZNF236Q9UL36 1845 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 A0A1B0GV90 55 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 C7orf71A4D174 169 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 AGFG2O95081 481 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 NUBP1P53384 320 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 OR4D11Q8NGI4 311 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 NEU1Q99519 415 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 PTPRFP10586 1907 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 FCGR3AP08637 254 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 TGIF2-C20orf24A0A0A6YYL0 155 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 KLK2P20151 261 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 REG1BP48304 166 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 RUNX1Q01196 453 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 HIKESHIQ53FT3 197 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 RHBDD2Q6NTF9 364 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 TMEM183AQ8IXX5 376 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 FADS6Q8N9I5 356 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 SERGEFQ9UGK8 458 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 TMEM56-RWDD3S4R434 201 aa12.16□□□□□ -0.46
COL4A3-202ENST00000396578 AGAP20933 346 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 MAGEA5P43359 124 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 PTPMT1Q8WUK0 201 aaPredicted RBP12.15□□□□□ -0.46
COL4A3-202ENST00000396578 ZNF714Q96N38 554 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 FAM206AQ9NX38 181 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 DMRT1Q9Y5R6 373 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 LINC00869P0C866 280 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 EFNB2P52799 333 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 IRF3Q14653 427 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 INO80CQ6PI98 192 aaPredicted RBP12.15□□□□□ -0.46
COL4A3-202ENST00000396578 C1orf174Q8IYL3 243 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 EAF1Q96JC9 268 aaPredicted RBP12.15□□□□□ -0.46
COL4A3-202ENST00000396578 KMT2EQ8IZD2 1858 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 FREM3P0C091 2139 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 FCARP24071 287 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 ZIC1Q15915 447 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 PEF1Q9UBV8 284 aaKnown RBP12.15□□□□□ -0.46
COL4A3-202ENST00000396578 OR2A4O95047 310 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 ARL14EPLP0DKL9 152 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 CTGFP29279 349 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 GFRA1P56159 465 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 COX14Q96I36 57 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 OR2A7Q96R45 310 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 C7orf66A4D0T2 115 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms