RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 CRYGSP22914 178 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 DNLZQ5SXM8 178 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 C10orf128Q5T292 105 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 ACSM6Q6P461 480 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 DPPA3Q6W0C5 159 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 CYP2G1PQ6ZSU1 146 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 OR10G4Q8NGN3 311 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 OR10G9Q8NGN4 311 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 OR10G7Q8NGN6 311 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 MBD3L1Q8WWY6 194 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 TAF15Q92804 592 aaKnown RBP eCLIP8.37□□□□□ -1.07
TRIM39-203ENST00000396547 C10orf35Q96D05 121 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 TRAV1-1A0A0B4J248 108 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 HPRT1P00492 218 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 MPLP40238 635 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 OR3A1P47881 315 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 THBS3P49746 956 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 TGFBR3Q03167 851 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 SLC25A53Q5H9E4 307 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 FFAR4Q5NUL3 377 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 SP5Q6BEB4 398 aaPredicted RBP8.36□□□□□ -1.07
TRIM39-203ENST00000396547 MCEMP1Q8IX19 187 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 OR5D13Q8NGL4 314 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 VN1R17PQ8TDU5 208 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 WDR61Q9GZS3 305 aaKnown RBP8.36□□□□□ -1.07
TRIM39-203ENST00000396547 PLSCR2Q9NRY7 297 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 OR6C3Q9NZP0 311 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 CLN8Q9UBY8 286 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 PRRC2CQ9Y520 2896 aaKnown RBP8.36□□□□□ -1.07
TRIM39-203ENST00000396547 H0Y980 276 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 SPINK4O60575 86 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 SELEP16581 610 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 SRYQ05066 204 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 PRDX4Q13162 271 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 OR5I1Q13606 314 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 LRRC75BQ2VPJ9 315 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 VASH2Q86V25 355 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 MKXQ8IYA7 352 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 P2RX4Q99571 388 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 FOXB1Q99853 325 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 ZPBPQ9BS86 351 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 DERL1Q9BUN8 251 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 MTCH1Q9NZJ7 389 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 hCG_38984A0A1B0GV85 526 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 LILRA1O75019 489 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 IGKV1-39P01597 117 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 IGKV1D-39P04432 117 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 C1QTNF9P0C862 333 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 CD27P26842 260 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 IL3RAP26951 378 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 ZNF816Q0VGE8 651 aaPredicted RBP8.36□□□□□ -1.07
TRIM39-203ENST00000396547 COTL1Q14019 142 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 DAZAP2Q15038 168 aaPredicted RBP8.36□□□□□ -1.07
TRIM39-203ENST00000396547 RHBDD2Q6NTF9 364 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 KCNIP4Q6PIL6 250 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 ZNF808Q8N4W9 903 aaPredicted RBP8.36□□□□□ -1.07
TRIM39-203ENST00000396547 ACY3Q96HD9 319 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 DIRC2Q96SL1 478 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 RIMS4Q9H426 269 aaPredicted RBP8.36□□□□□ -1.07
TRIM39-203ENST00000396547 MANBALQ9NQG1 85 aa8.36□□□□□ -1.07
TRIM39-203ENST00000396547 PTRH2Q9Y3E5 179 aaKnown RBP8.36□□□□□ -1.07
TRIM39-203ENST00000396547 CHCHD2Q9Y6H1 151 aaPredicted RBP8.36□□□□□ -1.07
TRIM39-203ENST00000396547 KIR2DS1A0A191URI9 304 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 C5orf49A4QMS7 147 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 KIR2DS4P43632 304 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 CARD18P57730 90 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 KIR2DS1Q14954 304 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 OR8B8Q15620 311 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 ARSJQ5FYB0 599 aaPredicted RBP8.35□□□□□ -1.07
TRIM39-203ENST00000396547 GBGT1Q8N5D6 347 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 OR2H1Q9GZK4 316 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 TMEM38BQ9NVV0 291 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 KNTC1P50748 2209 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 TCF21O43680 179 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 PIAS2O75928 621 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 DKK1O94907 266 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 NDUFB4O95168 129 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 NAPSAO96009 420 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 IGKV1-5P01602 117 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 RPLP1P05386 114 aaKnown RBP8.35□□□□□ -1.07
TRIM39-203ENST00000396547 PAX1P15863 534 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 TFF3Q07654 80 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 ACOT6Q3I5F7 207 aaPredicted RBP8.35□□□□□ -1.07
TRIM39-203ENST00000396547 GCSAMLQ5JQS6 135 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 LYSMD4Q5XG99 296 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 ABLIM2Q6H8Q1 611 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 MRPL21Q7Z2W9 205 aaKnown RBP8.35□□□□□ -1.07
TRIM39-203ENST00000396547 SLC25A45Q8N413 288 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 ZNF709Q8N972 641 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 OR5P3Q8WZ94 311 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 ZDHHC11Q9H8X9 412 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 OR2W1Q9Y3N9 320 aa8.35□□□□□ -1.07
TRIM39-203ENST00000396547 A0A1W2PR77 199 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 MARCH11A6NNE9 402 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 C11orf94C9JXX5 98 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 SIRPB1O00241 398 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 ZIC3O60481 467 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 CCKARP32238 428 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 HIST1H3AP68431 136 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 FAM53AQ6NSI3 398 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms