RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 HIGD1AQ9Y241 93 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 KCNK7Q9Y2U2 307 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 A8MWL6 223 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 SNURFLB1AK76 121 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 RHBDL1O75783 438 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 FCGR3AP08637 254 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 STARD6P59095 220 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 LRRC75BQ2VPJ9 315 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 IL22RA2Q969J5 263 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 MIXL1Q9H2W2 232 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 MRPS18BQ9Y676 258 aaKnown RBP4.74□□□□□ -1.65
VPS13C-204ENST00000395898 TTRP02766 147 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 PRF1P14222 555 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 CTSSP25774 331 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 SAXO1Q8IYX7 474 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 C9orf62Q8N4C0 152 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 TMEM251Q8N6I4 163 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 ZMAT5Q9UDW3 170 aaKnown RBP4.74□□□□□ -1.65
VPS13C-204ENST00000395898 CDC42EP3Q9UKI2 254 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 TMEM238LA0A1B0GVL6 79 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 A6NJY4 79 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 H3BQ15 152 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 SRSF9Q13242 221 aaKnown RBP eCLIP4.74□□□□□ -1.65
VPS13C-204ENST00000395898 TMEM78Q5T7P6 136 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 SMIM12Q96EX1 92 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 RSRP1Q9BUV0 290 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 MPV17P39210 176 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 ZAR1Q86SH2 424 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 OR10J6PQ8NGY7 276 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 COPS9Q8WXC6 57 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 WNT2BQ93097 391 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 PRSS27Q9BQR3 290 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 SPTBN1Q01082 2364 aaKnown RBP4.73□□□□□ -1.65
VPS13C-204ENST00000395898 IGKV3-7A0A075B6H7 116 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 NKX2-6A6NCS4 301 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 SIAH2O43255 324 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 ZNF205O95201 554 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 HTN1P15515 57 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 MGAT2Q10469 447 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 SYT8Q8NBV8 401 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 SNX22Q96L94 193 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 C19orf24Q9BVV8 132 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 TNFRSF19Q9NS68 423 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 MIOXQ9UGB7 285 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 PILRBQ9UKJ0 227 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 FAM90A26D6RGX4 464 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 ZNF207O43670 478 aaKnown RBP4.73□□□□□ -1.65
VPS13C-204ENST00000395898 PAGE4O60829 102 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 S1PR2O95136 353 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 SMIM6P0DI80 62 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 GZMMP51124 257 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 RPL8P62917 257 aaKnown RBP4.73□□□□□ -1.65
VPS13C-204ENST00000395898 MYO7BQ6PIF6 2116 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 C16orf92Q96LL3 132 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 SCNM1Q9BWG6 230 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 IGKV1-8A0A0C4DH67 115 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 A0A0J9YW62 118 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 RAB9AP51151 201 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 OR4C13Q8NGP0 309 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 POM121Q96HA1 1249 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 CHRNA10Q9GZZ6 450 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 PILRAQ9UKJ1 303 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 LRRK1Q38SD2 2015 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 FNDC1Q4ZHG4 1894 aaPredicted RBP4.73□□□□□ -1.65
VPS13C-204ENST00000395898 IGKV1D-16P01601 117 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 CD40P25942 277 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 GPR6P46095 362 aaPredicted RBP4.73□□□□□ -1.65
VPS13C-204ENST00000395898 RPL29P47914 159 aaKnown RBP4.73□□□□□ -1.65
VPS13C-204ENST00000395898 EBLN2Q6P2I7 272 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 A0A087X0M5 115 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 A0A1B0GX30 115 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 LINC00862A6NCI5 91 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 A6NDN8 102 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 MOSPD3O75425 235 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 MRPL30Q8TCC3 161 aaKnown RBP4.73□□□□□ -1.65
VPS13C-204ENST00000395898 PACRGQ96M98 296 aaPredicted RBP4.73□□□□□ -1.65
VPS13C-204ENST00000395898 KCNK17Q96T54 332 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 SIPA1L1O43166 1804 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 TRAV30A0A087WSZ9 112 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 HBZP02008 142 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 ADRA2AP08913 450 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 KIR2DL2P43627 348 aaPredicted RBP4.73□□□□□ -1.65
VPS13C-204ENST00000395898 PRSS12P56730 875 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 NANOS3P60323 173 aaKnown RBP4.73□□□□□ -1.65
VPS13C-204ENST00000395898 OR8G5Q8NG78 346 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 IGHV3OR15-7A0A075B7D8 119 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 HYPMO75409 117 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 MT-ND6P03923 174 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 MEOX2P50222 304 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 CCL8P80075 99 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 PRNTQ86SH4 94 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 PRDM14Q9GZV8 571 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 RCC2Q9P258 522 aaKnown RBP4.73□□□□□ -1.65
VPS13C-204ENST00000395898 HELZP42694 1942 aaKnown RBP4.73□□□□□ -1.65
VPS13C-204ENST00000395898 PATE3B3GLJ2 98 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 CDK2AP1O14519 115 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 NAT2P11245 290 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 ATP6V0CP27449 155 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 C10orf111Q8N326 155 aa4.73□□□□□ -1.65
VPS13C-204ENST00000395898 COL25A1Q9BXS0 654 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms