RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 RFLNBQ8N5W9 214 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 ZIC4Q8N9L1 334 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 GINS3Q9BRX5 216 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 ABHD14AQ9BUJ0 271 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 ITGB1BP1O14713 200 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 CXCL3P19876 107 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 GATA4P43694 442 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 GPR6P46095 362 aaPredicted RBP2.9□□□□□ -1.95
VPS13C-203ENST00000395896 PSG7Q13046 419 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 OR8G2PQ6IF36 304 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 TGIF2LYQ8IUE0 185 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 TGIF2LXQ8IUE1 241 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 LYG1Q8N1E2 194 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 CMTM2Q8TAZ6 248 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 LHX4Q969G2 390 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 NPVFQ9HCQ7 196 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 GFOD1Q9NXC2 390 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 C17orf100A8MU93 164 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 PPP1R2P9O14990 202 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 CECR9P0C854 216 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 SPCS3P61009 180 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 H1FOOQ8IZA3 346 aaPredicted RBP2.89□□□□□ -1.95
VPS13C-203ENST00000395896 LINC00312Q9Y6C7 94 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 SSTR2P30874 369 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 MMD2Q8IY49 270 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 PRR7Q8TB68 274 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 HRH4Q9H3N8 390 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 ASF1BQ9NVP2 202 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 PSENENQ9NZ42 101 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 CISD1Q9NZ45 108 aaKnown RBP2.89□□□□□ -1.95
VPS13C-203ENST00000395896 WIPI2Q9Y4P8 454 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 TEX15Q9BXT5 2789 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 SHISA3A0PJX4 238 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 EFNA2O43921 213 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 YPEL1O60688 119 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 ZG16O60844 167 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 MRPS11P82912 194 aaKnown RBP2.89□□□□□ -1.95
VPS13C-203ENST00000395896 CLINT1Q14677 625 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 AANATQ16613 207 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 GGNBP1Q5YKI7 109 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 FAAP20Q6NZ36 180 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 TMEM217Q8N7C4 229 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 YPEL2Q96QA6 119 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 C5orf66Q9H5L9 145 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 DLL3Q9NYJ7 618 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 NAPSAO96009 420 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 B3GALT5-AS1P59052 145 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 PIGYQ3MUY2 71 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 NCR3LG1Q68D85 454 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 GVQW1Q8N7I0 195 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 RBM14Q96PK6 669 aaKnown RBP2.89□□□□□ -1.95
VPS13C-203ENST00000395896 LPAR2Q9HBW0 351 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 NPIPB11E5RHQ5 1161 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 FOXH1O75593 365 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 ADRB1P08588 477 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 CD40P25942 277 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 OR3A1P47881 315 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 PLAURQ03405 335 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 PQLC2Q6ZP29 291 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 TBC1D26Q86UD7 250 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 SCCPDHQ8NBX0 429 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 ZNRF4Q8WWF5 429 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 SDHCQ99643 169 aaPredicted RBP2.89□□□□□ -1.95
VPS13C-203ENST00000395896 SLC35B3Q9H1N7 401 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 MANBALQ9NQG1 85 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 PARP11Q9NR21 331 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 CLCF1Q9UBD9 225 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 UNC79Q9P2D8 2635 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 RAMP1O60894 148 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 SMPD2O60906 423 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 DEDDO75618 318 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 ZNF250P15622 560 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 PI3P19957 117 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 GUCA2AQ02747 115 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 SSX2Q16385 188 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 OR1L8Q8NGR8 309 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 BORCS7Q96B45 105 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 ATP5SQ99766 215 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 SOX7Q9BT81 388 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 MSL2Q9HCI7 577 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 FAM74A7A6NL05 159 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 PPP5D1E7EU14 171 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 CLN5O75503 358 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 S100A8P05109 93 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 MAGEB1P43366 347 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 TEPPQ6URK8 271 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 CLEC2AQ6UVW9 174 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 OR9G1Q8NH87 305 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 C17orf50Q8WW18 174 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 PNRC2Q9NPJ4 139 aaKnown RBP2.89□□□□□ -1.95
VPS13C-203ENST00000395896 LYRM2Q9NU23 88 aaPredicted RBP2.89□□□□□ -1.95
VPS13C-203ENST00000395896 SLC45A2Q9UMX9 530 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 CCL2P13500 99 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 PLAC9Q5JTB6 97 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 ETV3LQ6ZN32 361 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 RBMXL3Q8N7X1 1067 aaKnown RBP2.89□□□□□ -1.95
VPS13C-203ENST00000395896 TMED6Q8WW62 240 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 FAM122AQ96E09 287 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 HARBI1Q96MB7 349 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 MAGT1Q9H0U3 335 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms