RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 TMPRSS5Q9H3S3 457 aa11.74□□□□□ -0.53
SNCA-204ENST00000394989 IGKV1-39P01597 117 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 IGKV1D-39P04432 117 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 ID3Q02535 119 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 MBNL2Q5VZF2 373 aaKnown RBP11.73□□□□□ -0.53
SNCA-204ENST00000394989 FAM53AQ6NSI3 398 aaPredicted RBP11.73□□□□□ -0.53
SNCA-204ENST00000394989 HSD17B11Q8NBQ5 300 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 IL22RA2Q969J5 263 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 UNKLQ9H9P5 680 aaKnown RBP11.73□□□□□ -0.53
SNCA-204ENST00000394989 UFSP2Q9NUQ7 469 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 KLK10O43240 276 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 PTBP3O95758 552 aaKnown RBP11.73□□□□□ -0.53
SNCA-204ENST00000394989 DVL1P1P54792 670 aaPredicted RBP11.73□□□□□ -0.53
SNCA-204ENST00000394989 ACP7Q6ZNF0 438 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 BEND4Q6ZU67 534 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 SPIN2AQ99865 258 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 SPIN2BQ9BPZ2 258 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 PARP11Q9NR21 331 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 RNF115Q9Y4L5 304 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 CHD3Q12873 2000 aaKnown RBP11.73□□□□□ -0.53
SNCA-204ENST00000394989 ADGRG4Q8IZF6 3080 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 HEATR1Q9H583 2144 aaKnown RBP11.73□□□□□ -0.53
SNCA-204ENST00000394989 A0A1B0GWJ7 208 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 NUDT19A8MXV4 375 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 WNT2P09544 360 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 MDKP21741 143 aaPredicted RBP11.73□□□□□ -0.53
SNCA-204ENST00000394989 CASP6P55212 293 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 GAMTQ14353 236 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 GUK1Q16774 197 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 IZUMO4Q1ZYL8 232 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 LYPD6BQ8NI32 183 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 GPR61Q9BZJ8 451 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 LYRM2Q9NU23 88 aaPredicted RBP11.73□□□□□ -0.53
SNCA-204ENST00000394989 METRNQ9UJH8 293 aa11.73□□□□□ -0.53
SNCA-204ENST00000394989 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.72□□□□□ -0.53
SNCA-204ENST00000394989 PITX3O75364 302 aa11.72□□□□□ -0.53
SNCA-204ENST00000394989 IGHV2-5P01817 119 aa11.72□□□□□ -0.53
SNCA-204ENST00000394989 CEACAM6P40199 344 aa11.72□□□□□ -0.53
SNCA-204ENST00000394989 ZNF718Q3SXZ3 478 aa11.72□□□□□ -0.53
SNCA-204ENST00000394989 Q3ZCU0 254 aa11.72□□□□□ -0.53
SNCA-204ENST00000394989 TMEM171Q8WVE6 324 aa11.72□□□□□ -0.53
SNCA-204ENST00000394989 COQ2Q96H96 371 aa11.72□□□□□ -0.53
SNCA-204ENST00000394989 C14orf144Q96I85 54 aa11.72□□□□□ -0.53
SNCA-204ENST00000394989 PPP1R3CQ9UQK1 317 aa11.72□□□□□ -0.53
SNCA-204ENST00000394989 HSPA12AO43301 675 aa11.72□□□□□ -0.53
SNCA-204ENST00000394989 OR2C1O95371 312 aa11.72□□□□□ -0.53
SNCA-204ENST00000394989 TUBG1P23258 451 aa11.72□□□□□ -0.53
SNCA-204ENST00000394989 CAMLGP49069 296 aa11.72□□□□□ -0.53
SNCA-204ENST00000394989 AESQ08117 197 aa11.72□□□□□ -0.53
SNCA-204ENST00000394989 Q6ZRM9 215 aa11.72□□□□□ -0.53
SNCA-204ENST00000394989 LRP11Q86VZ4 500 aa11.72□□□□□ -0.53
SNCA-204ENST00000394989 KCNJ16Q9NPI9 418 aa11.72□□□□□ -0.53
SNCA-204ENST00000394989 TUBG2Q9NRH3 451 aa11.72□□□□□ -0.53
SNCA-204ENST00000394989 KIAA1324LA8MWY0 1029 aaPredicted RBP11.71□□□□□ -0.53
SNCA-204ENST00000394989 CD5P06127 495 aa11.71□□□□□ -0.53
SNCA-204ENST00000394989 SEC11BP0C7V7 166 aa11.71□□□□□ -0.53
SNCA-204ENST00000394989 SPNS3Q6ZMD2 512 aa11.71□□□□□ -0.53
SNCA-204ENST00000394989 ZNF295-AS1Q8N0V1 137 aa11.71□□□□□ -0.53
SNCA-204ENST00000394989 FAM169BQ8N8A8 192 aa11.71□□□□□ -0.53
SNCA-204ENST00000394989 GPR146Q96CH1 333 aa11.71□□□□□ -0.53
SNCA-204ENST00000394989 RARRES2Q99969 163 aa11.71□□□□□ -0.53
SNCA-204ENST00000394989 DOK5Q9P104 306 aa11.71□□□□□ -0.53
SNCA-204ENST00000394989 WASF3Q9UPY6 502 aa11.71□□□□□ -0.53
SNCA-204ENST00000394989 C12orf77C9JDV5 145 aa11.71□□□□□ -0.53
SNCA-204ENST00000394989 DANCRP0C864 163 aa11.71□□□□□ -0.53
SNCA-204ENST00000394989 GCH1P30793 250 aa11.71□□□□□ -0.53
SNCA-204ENST00000394989 PAX9P55771 341 aa11.71□□□□□ -0.53
SNCA-204ENST00000394989 ZNF124Q15973 351 aa11.71□□□□□ -0.53
SNCA-204ENST00000394989 ZNF585BQ52M93 769 aa11.71□□□□□ -0.53
SNCA-204ENST00000394989 TMEM252Q8N6L7 170 aa11.71□□□□□ -0.53
SNCA-204ENST00000394989 OR1L1Q8NH94 360 aa11.71□□□□□ -0.53
SNCA-204ENST00000394989 ABHD14BQ96IU4 210 aa11.71□□□□□ -0.53
SNCA-204ENST00000394989 DMRT1Q9Y5R6 373 aa11.71□□□□□ -0.53
SNCA-204ENST00000394989 KPTNQ9Y664 436 aa11.71□□□□□ -0.53
SNCA-204ENST00000394989 BORCS7-ASMTA0A0B4J1R7 106 aa11.71□□□□□ -0.54
SNCA-204ENST00000394989 IFITM10A6NMD0 228 aa11.71□□□□□ -0.54
SNCA-204ENST00000394989 ST8SIA5O15466 376 aa11.71□□□□□ -0.54
SNCA-204ENST00000394989 PPIHO43447 177 aaKnown RBP11.71□□□□□ -0.54
SNCA-204ENST00000394989 OMGP23515 440 aa11.71□□□□□ -0.54
SNCA-204ENST00000394989 FAM212BQ9NTI7 297 aaPredicted RBP11.71□□□□□ -0.54
SNCA-204ENST00000394989 GAR1Q9NY12 217 aaKnown RBP11.71□□□□□ -0.54
SNCA-204ENST00000394989 TMEM30CPA0ZSE6 113 aa11.7□□□□□ -0.54
SNCA-204ENST00000394989 CHST1O43916 411 aa11.7□□□□□ -0.54
SNCA-204ENST00000394989 SERPINE2P07093 398 aa11.7□□□□□ -0.54
SNCA-204ENST00000394989 FOLR2P14207 255 aa11.7□□□□□ -0.54
SNCA-204ENST00000394989 FABP4P15090 132 aa11.7□□□□□ -0.54
SNCA-204ENST00000394989 EPHA1P21709 976 aa11.7□□□□□ -0.54
SNCA-204ENST00000394989 S100GP29377 79 aa11.7□□□□□ -0.54
SNCA-204ENST00000394989 OR3A1P47881 315 aa11.7□□□□□ -0.54
SNCA-204ENST00000394989 RAB5CP51148 216 aa11.7□□□□□ -0.54
SNCA-204ENST00000394989 ZNF83P51522 516 aa11.7□□□□□ -0.54
SNCA-204ENST00000394989 ALKBH2Q6NS38 261 aa11.7□□□□□ -0.54
SNCA-204ENST00000394989 DRAM1Q8N682 238 aa11.7□□□□□ -0.54
SNCA-204ENST00000394989 CADP27708 2225 aa11.7□□□□□ -0.54
SNCA-204ENST00000394989 IFNA17P01571 189 aa11.7□□□□□ -0.54
SNCA-204ENST00000394989 SPRNQ5BIV9 151 aa11.7□□□□□ -0.54
SNCA-204ENST00000394989 SLC35E4Q6ICL7 350 aa11.7□□□□□ -0.54
SNCA-204ENST00000394989 PRR7Q8TB68 274 aa11.7□□□□□ -0.54
SNCA-204ENST00000394989 C5orf30Q96GV9 206 aa11.7□□□□□ -0.54
SNCA-204ENST00000394989 SSX3Q99909 188 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms