RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 MBD3L4A6NDZ8 208 aaPredicted RBP12.83□□□□□ -0.36
CPSF7-202ENST00000394888 MBD3L3A6NE82 208 aaPredicted RBP12.83□□□□□ -0.36
CPSF7-202ENST00000394888 MBD3L5A6NJ08 208 aaPredicted RBP12.83□□□□□ -0.36
CPSF7-202ENST00000394888 A6NLC8 198 aa12.83□□□□□ -0.36
CPSF7-202ENST00000394888 OR13C7P0DN81 318 aa12.83□□□□□ -0.36
CPSF7-202ENST00000394888 CR1LQ2VPA4 569 aa12.83□□□□□ -0.36
CPSF7-202ENST00000394888 MBD3L2Q8NHZ7 208 aaPredicted RBP12.83□□□□□ -0.36
CPSF7-202ENST00000394888 DOCK11Q5JSL3 2073 aa12.83□□□□□ -0.36
CPSF7-202ENST00000394888 ZFHX3Q15911 3703 aa12.83□□□□□ -0.36
CPSF7-202ENST00000394888 SCAF4O95104 1147 aaKnown RBP12.83□□□□□ -0.36
CPSF7-202ENST00000394888 IAPPP10997 89 aa12.83□□□□□ -0.36
CPSF7-202ENST00000394888 C14orf79Q96F83 325 aa12.83□□□□□ -0.36
CPSF7-202ENST00000394888 RAB40CQ96S21 281 aa12.83□□□□□ -0.36
CPSF7-202ENST00000394888 RPRMQ9NS64 109 aa12.83□□□□□ -0.36
CPSF7-202ENST00000394888 A0A1W2PPE2 198 aa12.83□□□□□ -0.36
CPSF7-202ENST00000394888 H7C2Y5 167 aa12.83□□□□□ -0.36
CPSF7-202ENST00000394888 UBE2NP61088 152 aaKnown RBP12.83□□□□□ -0.36
CPSF7-202ENST00000394888 LRRC75BQ2VPJ9 315 aa12.83□□□□□ -0.36
CPSF7-202ENST00000394888 FAM90A2PQ658T7 463 aa12.83□□□□□ -0.36
CPSF7-202ENST00000394888 CENPVQ7Z7K6 275 aaPredicted RBP12.83□□□□□ -0.36
CPSF7-202ENST00000394888 EIF5A2Q9GZV4 153 aaKnown RBP12.83□□□□□ -0.36
CPSF7-202ENST00000394888 SMCO4Q9NRQ5 59 aa12.83□□□□□ -0.36
CPSF7-202ENST00000394888 ANKRD11Q6UB99 2663 aaPredicted RBP12.83□□□□□ -0.36
CPSF7-202ENST00000394888 C5orf52A6NGY3 159 aa12.82□□□□□ -0.36
CPSF7-202ENST00000394888 METTL15P1P0C7V9 234 aa12.82□□□□□ -0.36
CPSF7-202ENST00000394888 HOXA1P49639 335 aaPredicted RBP12.82□□□□□ -0.36
CPSF7-202ENST00000394888 AVPI1Q5T686 147 aa12.82□□□□□ -0.36
CPSF7-202ENST00000394888 ZNF474Q6S9Z5 364 aaPredicted RBP12.82□□□□□ -0.36
CPSF7-202ENST00000394888 S1PR2O95136 353 aa12.82□□□□□ -0.36
CPSF7-202ENST00000394888 ARG1P05089 322 aa12.82□□□□□ -0.36
CPSF7-202ENST00000394888 CD55P08174 381 aa12.82□□□□□ -0.36
CPSF7-202ENST00000394888 COL10A1Q03692 680 aa12.82□□□□□ -0.36
CPSF7-202ENST00000394888 AARDQ4LEZ3 155 aa12.82□□□□□ -0.36
CPSF7-202ENST00000394888 CNEP1R1Q8N9A8 125 aa12.82□□□□□ -0.36
CPSF7-202ENST00000394888 CXXC4Q9H2H0 198 aa12.82□□□□□ -0.36
CPSF7-202ENST00000394888 IGHV2-5P01817 119 aa12.82□□□□□ -0.36
CPSF7-202ENST00000394888 MUCL1Q96DR8 90 aa12.82□□□□□ -0.36
CPSF7-202ENST00000394888 MALSU1Q96EH3 234 aa12.82□□□□□ -0.36
CPSF7-202ENST00000394888 OR2D2Q9H210 308 aa12.82□□□□□ -0.36
CPSF7-202ENST00000394888 RBKSQ9H477 322 aa12.82□□□□□ -0.36
CPSF7-202ENST00000394888 OR8U8P0C7N1 319 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 CD200P41217 278 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 RNF212Q495C1 297 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 SMDT1Q9H4I9 107 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 RNF150Q9ULK6 438 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 MMP24Q9Y5R2 645 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 LOC102723971A0A1B0GUV8 181 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 LHBP01229 141 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 PRH1P02810 166 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 SERPINE2P07093 398 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 DPPA3Q6W0C5 159 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 LFNGQ8NES3 379 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 RBMXL1Q96E39 390 aaKnown RBP12.81□□□□□ -0.36
CPSF7-202ENST00000394888 TMEM30CPA0ZSE6 113 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 ODAMA1E959 279 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 SNRNP70P08621 437 aaKnown RBP12.81□□□□□ -0.36
CPSF7-202ENST00000394888 CGB3P0DN86 165 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 CGB7P0DN87 165 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 G6PCP35575 357 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 ZNF134P52741 427 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 LOXL3P58215 753 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 TGFBR3Q03167 851 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 TNFRSF9Q07011 255 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 FAM169BQ8N8A8 192 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 CYB561D1Q8N8Q1 229 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 MBD3L1Q8WWY6 194 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 GNPNAT1Q96EK6 184 aaPredicted RBP12.81□□□□□ -0.36
CPSF7-202ENST00000394888 RPS10P5Q9NQ39 176 aa12.81□□□□□ -0.36
CPSF7-202ENST00000394888 LIN7CQ9NUP9 197 aaKnown RBP12.81□□□□□ -0.36
CPSF7-202ENST00000394888 hCG_1809904A0A1W2PP81 198 aa12.8□□□□□ -0.36
CPSF7-202ENST00000394888 A0A1W2PR64 198 aa12.8□□□□□ -0.36
CPSF7-202ENST00000394888 A0A1W2PRV1 198 aa12.8□□□□□ -0.36
CPSF7-202ENST00000394888 ZNF891A8MT65 544 aaPredicted RBP12.8□□□□□ -0.36
CPSF7-202ENST00000394888 NKX6-1P78426 367 aaPredicted RBP12.8□□□□□ -0.36
CPSF7-202ENST00000394888 MSMO1Q15800 293 aa12.8□□□□□ -0.36
CPSF7-202ENST00000394888 MRGPRDQ8TDS7 321 aa12.8□□□□□ -0.36
CPSF7-202ENST00000394888 WDR61Q9GZS3 305 aaKnown RBP12.8□□□□□ -0.36
CPSF7-202ENST00000394888 WASF3Q9UPY6 502 aa12.8□□□□□ -0.36
CPSF7-202ENST00000394888 LRBAP50851 2863 aa12.8□□□□□ -0.36
CPSF7-202ENST00000394888 EIF3GO75821 320 aaKnown RBP eCLIP12.8□□□□□ -0.36
CPSF7-202ENST00000394888 UBE2KP61086 200 aa12.8□□□□□ -0.36
CPSF7-202ENST00000394888 VAMP2P63027 116 aa12.8□□□□□ -0.36
CPSF7-202ENST00000394888 RHEBQ15382 184 aa12.8□□□□□ -0.36
CPSF7-202ENST00000394888 VWC2Q2TAL6 325 aa12.8□□□□□ -0.36
CPSF7-202ENST00000394888 BTNL3Q6UXE8 466 aa12.8□□□□□ -0.36
CPSF7-202ENST00000394888 TCF23Q7RTU1 214 aa12.8□□□□□ -0.36
CPSF7-202ENST00000394888 THNSL2Q86YJ6 484 aa12.8□□□□□ -0.36
CPSF7-202ENST00000394888 OOEPA6NGQ2 149 aa12.8□□□□□ -0.36
CPSF7-202ENST00000394888 OR5H1A6NKK0 313 aa12.8□□□□□ -0.36
CPSF7-202ENST00000394888 IGFL3Q6UXB1 125 aa12.8□□□□□ -0.36
CPSF7-202ENST00000394888 HEPN1Q6WQI6 88 aa12.8□□□□□ -0.36
CPSF7-202ENST00000394888 GCSAMQ8N6F7 178 aa12.8□□□□□ -0.36
CPSF7-202ENST00000394888 ZDHHC16Q969W1 377 aa12.8□□□□□ -0.36
CPSF7-202ENST00000394888 PSENENQ9NZ42 101 aa12.8□□□□□ -0.36
CPSF7-202ENST00000394888 PHOX2AO14813 284 aa12.79□□□□□ -0.36
CPSF7-202ENST00000394888 CA5BP1Q8WTZ4 195 aa12.79□□□□□ -0.36
CPSF7-202ENST00000394888 RCC1LQ96I51 464 aaKnown RBP12.79□□□□□ -0.36
CPSF7-202ENST00000394888 PSMG3Q9BT73 122 aaPredicted RBP12.79□□□□□ -0.36
CPSF7-202ENST00000394888 OBP2BQ9NPH6 170 aa12.79□□□□□ -0.36
CPSF7-202ENST00000394888 TRAV17A0A0B4J275 112 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms