RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 IGKV3D-15A0A087WSY6 115 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 IGKV3-15P01624 115 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 CXCL3P19876 107 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 LGALSLQ3ZCW2 172 aaPredicted RBP8.97□□□□□ -0.97
COL4A6-203ENST00000394872 LAMTOR1Q6IAA8 161 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 C8orf82Q6P1X6 216 aaPredicted RBP8.97□□□□□ -0.97
COL4A6-203ENST00000394872 BET1LQ9NYM9 111 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 PITPNC1Q9UKF7 332 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 PTPRZ1P23471 2315 aaPredicted RBP8.97□□□□□ -0.97
COL4A6-203ENST00000394872 RGPD3A6NKT7 1758 aaPredicted RBP8.97□□□□□ -0.97
COL4A6-203ENST00000394872 IGHV3OR16-10A0A075B7F0 116 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 LOC389332A0A1B0GUA5 103 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 A0A1W2PQM1 296 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 KCNAB3O43448 404 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 IGF2P01344 180 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 SNRPCP09234 159 aaKnown RBP8.97□□□□□ -0.97
COL4A6-203ENST00000394872 ERGP11308 486 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 IER3P46695 156 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 RPL29P47914 159 aaKnown RBP8.97□□□□□ -0.97
COL4A6-203ENST00000394872 ARF6P62330 175 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 SRSF9Q13242 221 aaKnown RBP eCLIP8.97□□□□□ -0.97
COL4A6-203ENST00000394872 RFLNBQ8N5W9 214 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 SRXN1Q9BYN0 137 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 LINC01560Q8TB33 94 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 NPVFQ9HCQ7 196 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 SIRT7Q9NRC8 400 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 IL17BQ9UHF5 180 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 COL5A3P25940 1745 aaPredicted RBP8.97□□□□□ -0.97
COL4A6-203ENST00000394872 SNAI3Q3KNW1 292 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 TMEM91Q6ZNR0 172 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 FADS6Q8N9I5 356 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 OR11H7Q8NGC8 314 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 POM121Q96HA1 1249 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 FAM181BA6NEQ2 426 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 SCTP09683 121 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 SCNM1Q9BWG6 230 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 hCG_38984A0A1B0GV85 526 aa8.96□□□□□ -0.97
COL4A6-203ENST00000394872 HOXB1P14653 301 aaPredicted RBP8.96□□□□□ -0.97
COL4A6-203ENST00000394872 DDB2Q92466 427 aa8.96□□□□□ -0.97
COL4A6-203ENST00000394872 A1L4Q6 167 aa8.96□□□□□ -0.97
COL4A6-203ENST00000394872 TMEM189A5PLL7 270 aa8.96□□□□□ -0.97
COL4A6-203ENST00000394872 SNURFLB1AK76 121 aa8.96□□□□□ -0.97
COL4A6-203ENST00000394872 PF4P02776 101 aa8.96□□□□□ -0.97
COL4A6-203ENST00000394872 RPL8P62917 257 aaKnown RBP8.96□□□□□ -0.97
COL4A6-203ENST00000394872 PCOLCEQ15113 449 aa8.96□□□□□ -0.97
COL4A6-203ENST00000394872 DPPA3Q6W0C5 159 aa8.96□□□□□ -0.97
COL4A6-203ENST00000394872 CENPVQ7Z7K6 275 aaPredicted RBP8.96□□□□□ -0.97
COL4A6-203ENST00000394872 SLC25A33Q9BSK2 321 aa8.96□□□□□ -0.97
COL4A6-203ENST00000394872 FUT9Q9Y231 359 aa8.96□□□□□ -0.97
COL4A6-203ENST00000394872 COL11A2P13942 1736 aaPredicted RBP8.96□□□□□ -0.97
COL4A6-203ENST00000394872 DLL1O00548 723 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 OR10J1P30954 320 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 PLAURQ03405 335 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 CSRP2Q16527 193 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 C19orf54Q5BKX5 351 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 PTX4Q96A99 478 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 ISOC2Q96AB3 205 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 KCNK17Q96T54 332 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 PXMP4Q9Y6I8 212 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 ELOA3CA0A087WX78 387 aaPredicted RBP8.96□□□□□ -0.98
COL4A6-203ENST00000394872 IGHV1-69-2A0A0G2JMI3 117 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 M0R3E3 92 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 GZMMP51124 257 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 ATP5G2Q06055 141 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 EIF4EBP2Q13542 120 aaPredicted RBP8.96□□□□□ -0.98
COL4A6-203ENST00000394872 IRF3Q14653 427 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 FAM106AQ4KMX7 169 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 MMD2Q8IY49 270 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 FAM181AQ8N9Y4 354 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 KLF14Q8TD94 323 aaPredicted RBP8.96□□□□□ -0.98
COL4A6-203ENST00000394872 DUX5Q96PT3 197 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 GDF15Q99988 308 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 AURKAIP1Q9NWT8 199 aaPredicted RBP8.96□□□□□ -0.98
COL4A6-203ENST00000394872 CALYQ9NYX4 217 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 SPAG17Q6Q759 2223 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 M0R143 59 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 KLF7O75840 302 aaPredicted RBP8.96□□□□□ -0.98
COL4A6-203ENST00000394872 AMMECR1LQ6DCA0 310 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 STPG3Q8N7X2 389 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 FDCSPQ8NFU4 85 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 RGP1Q92546 391 aaPredicted RBP8.96□□□□□ -0.98
COL4A6-203ENST00000394872 SMIM12Q96EX1 92 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 ELOVL5Q9NYP7 299 aa8.96□□□□□ -0.98
COL4A6-203ENST00000394872 SCN4AP35499 1836 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 C1QCP02747 245 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 ABHD12Q8N2K0 398 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 ST6GAL2Q96JF0 529 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 OPN4Q9UHM6 478 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 H0Y980 276 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 MRPL30Q8TCC3 161 aaKnown RBP8.95□□□□□ -0.98
COL4A6-203ENST00000394872 IL36RNQ9UBH0 155 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 IL19Q9UHD0 177 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 LNP1A1A4G5 178 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 OR4C46A6NHA9 309 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 AP4M1O00189 453 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 ATP6V0CP27449 155 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 TLNRD1Q9H1K6 362 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 TMEM56-RWDD3S4R434 201 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 CASP8AP2Q9UKL3 1982 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 H3BQ15 152 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms