RNA–Protein interactions for RNA: ENST00000394752.7

SFMBT1-201, Transcript of Scm like with four mbt domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFMBT1, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-201ENST00000394752 IGKV1-12A0A0C4DH73 117 aa12.53□□□□□ -0.4
SFMBT1-201ENST00000394752 DNASE2O00115 360 aaPredicted RBP12.53□□□□□ -0.4
SFMBT1-201ENST00000394752 IGKV1D-12P01611 117 aa12.53□□□□□ -0.4
SFMBT1-201ENST00000394752 DANCRP0C864 163 aa12.53□□□□□ -0.4
SFMBT1-201ENST00000394752 CD59P13987 128 aa12.53□□□□□ -0.4
SFMBT1-201ENST00000394752 CCL1P22362 96 aa12.53□□□□□ -0.4
SFMBT1-201ENST00000394752 ERVFC1-1P60608 527 aa12.53□□□□□ -0.4
SFMBT1-201ENST00000394752 ERHP84090 104 aaKnown RBP12.53□□□□□ -0.4
SFMBT1-201ENST00000394752 FAM214BQ7L5A3 538 aa12.53□□□□□ -0.4
SFMBT1-201ENST00000394752 OR4C12Q96R67 309 aa12.53□□□□□ -0.4
SFMBT1-201ENST00000394752 IGSF23A1L1A6 192 aa12.53□□□□□ -0.4
SFMBT1-201ENST00000394752 H0Y980 276 aa12.53□□□□□ -0.4
SFMBT1-201ENST00000394752 WNT9BO14905 357 aa12.53□□□□□ -0.4
SFMBT1-201ENST00000394752 FAM78BQ5VT40 261 aa12.53□□□□□ -0.4
SFMBT1-201ENST00000394752 ABLIM2Q6H8Q1 611 aa12.53□□□□□ -0.4
SFMBT1-201ENST00000394752 WDFY1Q8IWB7 410 aa12.53□□□□□ -0.4
SFMBT1-201ENST00000394752 GMPPAQ96IJ6 420 aaPredicted RBP12.52□□□□□ -0.4
SFMBT1-201ENST00000394752 H0Y8G0 127 aa12.52□□□□□ -0.4
SFMBT1-201ENST00000394752 MRPS11P82912 194 aaKnown RBP12.52□□□□□ -0.4
SFMBT1-201ENST00000394752 COL10A1Q03692 680 aa12.52□□□□□ -0.4
SFMBT1-201ENST00000394752 ZNF439Q8NDP4 499 aa12.52□□□□□ -0.4
SFMBT1-201ENST00000394752 LYRM2Q9NU23 88 aaPredicted RBP12.52□□□□□ -0.4
SFMBT1-201ENST00000394752 FOXD3Q9UJU5 478 aaPredicted RBP12.52□□□□□ -0.4
SFMBT1-201ENST00000394752 NCOA6Q14686 2063 aaPredicted RBP12.52□□□□□ -0.41
SFMBT1-201ENST00000394752 ZNF716A6NP11 495 aa12.52□□□□□ -0.41
SFMBT1-201ENST00000394752 ZNF891A8MT65 544 aaPredicted RBP12.52□□□□□ -0.41
SFMBT1-201ENST00000394752 C11orf94C9JXX5 98 aa12.52□□□□□ -0.41
SFMBT1-201ENST00000394752 FAM89BQ8N5H3 189 aa12.52□□□□□ -0.41
SFMBT1-201ENST00000394752 MRPL30Q8TCC3 161 aaKnown RBP12.52□□□□□ -0.41
SFMBT1-201ENST00000394752 NABP1Q96AH0 204 aa12.52□□□□□ -0.41
SFMBT1-201ENST00000394752 NEIL1Q96FI4 390 aaPredicted RBP12.52□□□□□ -0.41
SFMBT1-201ENST00000394752 PNRC2Q9NPJ4 139 aaKnown RBP12.52□□□□□ -0.41
SFMBT1-201ENST00000394752 VAX2Q9UIW0 290 aa12.52□□□□□ -0.41
SFMBT1-201ENST00000394752 CA11O75493 328 aa12.52□□□□□ -0.41
SFMBT1-201ENST00000394752 OR10J4P0C629 311 aa12.52□□□□□ -0.41
SFMBT1-201ENST00000394752 GGNQ86UU5 652 aa12.52□□□□□ -0.41
SFMBT1-201ENST00000394752 TMEM45BQ96B21 275 aa12.52□□□□□ -0.41
SFMBT1-201ENST00000394752 BOD1Q96IK1 185 aa12.52□□□□□ -0.41
SFMBT1-201ENST00000394752 POM121L2Q96KW2 1035 aa12.52□□□□□ -0.41
SFMBT1-201ENST00000394752 ABHD14AQ9BUJ0 271 aa12.52□□□□□ -0.41
SFMBT1-201ENST00000394752 OPN3Q9H1Y3 402 aaPredicted RBP12.52□□□□□ -0.41
SFMBT1-201ENST00000394752 FBLN5Q9UBX5 448 aa12.52□□□□□ -0.41
SFMBT1-201ENST00000394752 IGKV1D-13A0A0B4J2D9 117 aa12.51□□□□□ -0.41
SFMBT1-201ENST00000394752 E9PLN8 166 aa12.51□□□□□ -0.41
SFMBT1-201ENST00000394752 IGKV1-13P0DP09 117 aa12.51□□□□□ -0.41
SFMBT1-201ENST00000394752 CTSSP25774 331 aa12.51□□□□□ -0.41
SFMBT1-201ENST00000394752 HIST3H3Q16695 136 aa12.51□□□□□ -0.41
SFMBT1-201ENST00000394752 CHD9Q3L8U1 2897 aa12.51□□□□□ -0.41
SFMBT1-201ENST00000394752 PEAR1Q5VY43 1037 aaPredicted RBP12.51□□□□□ -0.41
SFMBT1-201ENST00000394752 GFRALQ6UXV0 394 aa12.51□□□□□ -0.41
SFMBT1-201ENST00000394752 RND1Q92730 232 aa12.51□□□□□ -0.41
SFMBT1-201ENST00000394752 RNF166Q96A37 237 aaPredicted RBP12.51□□□□□ -0.41
SFMBT1-201ENST00000394752 GALNT14Q96FL9 552 aa12.51□□□□□ -0.41
SFMBT1-201ENST00000394752 MRPS18CQ9Y3D5 142 aaKnown RBP12.51□□□□□ -0.41
SFMBT1-201ENST00000394752 ZNF343Q6P1L6 599 aa12.51□□□□□ -0.41
SFMBT1-201ENST00000394752 INO80CQ6PI98 192 aaPredicted RBP12.51□□□□□ -0.41
SFMBT1-201ENST00000394752 TMEM18Q96B42 140 aa12.51□□□□□ -0.41
SFMBT1-201ENST00000394752 BSCL2Q96G97 398 aaPredicted RBP12.51□□□□□ -0.41
SFMBT1-201ENST00000394752 ZNF355PQ9NSJ1 428 aa12.51□□□□□ -0.41
SFMBT1-201ENST00000394752 NEURL1O76050 574 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 UBE2G1P62253 170 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 CCL8P80075 99 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 LEAP2Q969E1 77 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 CTDSP1Q9GZU7 261 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 PRO3102Q9H379 93 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 ZNF331Q9NQX6 463 aaPredicted RBP12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 GLRX2Q9NS18 164 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 RPRMQ9NS64 109 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 XKRY2A2RUG3 117 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 HRASP01112 189 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 TRGC2P03986 189 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 BCL2P10415 239 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 GLIPR1P48060 266 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 BHLHA15Q7RTS1 189 aaPredicted RBP12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 MRGPRGQ86SM5 289 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 KLF14Q8TD94 323 aaPredicted RBP12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 BTF3L4Q96K17 158 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 HSD17B10Q99714 261 aaKnown RBP12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 IL36GQ9NZH8 169 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 GTF3C1Q12789 2109 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 PRDX2P32119 198 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 TAS2R45P59539 299 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 KHDC3LQ587J8 217 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 CORO2AQ92828 525 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 USB1Q9BQ65 265 aaKnown RBP12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 REPIN1Q9BWE0 567 aaKnown RBP12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 IGKV1-27A0A075B6S5 117 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 CLDN14O95500 239 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 APELAP0DMC3 54 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 TMEM11P17152 192 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 GZMHP20718 246 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 CMTM2Q8TAZ6 248 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 REG4Q9BYZ8 158 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 TUBD1Q9UJT1 453 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 TRAPPC1Q9Y5R8 145 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 CUL9Q8IWT3 2517 aa12.5□□□□□ -0.41
SFMBT1-201ENST00000394752 LRP4O75096 1905 aa12.49□□□□□ -0.41
SFMBT1-201ENST00000394752 SSTR5P35346 364 aa12.49□□□□□ -0.41
SFMBT1-201ENST00000394752 LHX2P50458 406 aa12.49□□□□□ -0.41
SFMBT1-201ENST00000394752 SUB1P53999 127 aaKnown RBP eCLIP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms