RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 FAM90A12PA8MX19 464 aa8.94□□□□□ -0.98
ACTN1-203ENST00000394419 FAM90A5PA8MXJ8 464 aa8.94□□□□□ -0.98
ACTN1-203ENST00000394419 FAM90A23PA8MXZ1 464 aa8.94□□□□□ -0.98
ACTN1-203ENST00000394419 FAM157AC9JC47 383 aa8.94□□□□□ -0.98
ACTN1-203ENST00000394419 ZNF737O75373 536 aa8.94□□□□□ -0.98
ACTN1-203ENST00000394419 LY86O95711 162 aa8.94□□□□□ -0.98
ACTN1-203ENST00000394419 IFNA10P01566 189 aa8.94□□□□□ -0.98
ACTN1-203ENST00000394419 FAM90A15PP0C7V4 464 aa8.94□□□□□ -0.98
ACTN1-203ENST00000394419 FAM90A13PP0C7W8 464 aa8.94□□□□□ -0.98
ACTN1-203ENST00000394419 FAM90A14PP0C7W9 464 aa8.94□□□□□ -0.98
ACTN1-203ENST00000394419 FAM90A24PP0C7X0 464 aa8.94□□□□□ -0.98
ACTN1-203ENST00000394419 SELLP14151 372 aa8.94□□□□□ -0.98
ACTN1-203ENST00000394419 FABP4P15090 132 aa8.94□□□□□ -0.98
ACTN1-203ENST00000394419 Q3ZCU0 254 aa8.94□□□□□ -0.98
ACTN1-203ENST00000394419 RNF212Q495C1 297 aa8.94□□□□□ -0.98
ACTN1-203ENST00000394419 WDR25Q64LD2 544 aaPredicted RBP8.94□□□□□ -0.98
ACTN1-203ENST00000394419 PCSK4Q6UW60 755 aa8.94□□□□□ -0.98
ACTN1-203ENST00000394419 DRAM1Q8N682 238 aa8.94□□□□□ -0.98
ACTN1-203ENST00000394419 Q8WTZ3 238 aa8.94□□□□□ -0.98
ACTN1-203ENST00000394419 FAM210BQ96KR6 192 aa8.94□□□□□ -0.98
ACTN1-203ENST00000394419 DOK5Q9P104 306 aa8.94□□□□□ -0.98
ACTN1-203ENST00000394419 INTS1Q8N201 2190 aaKnown RBP8.94□□□□□ -0.98
ACTN1-203ENST00000394419 HAND1O96004 215 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 CXCL1P09341 107 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 HNF1AP20823 631 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 FGF7P21781 194 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 CATR1Q13166 79 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 COLCA1Q6ZS62 124 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 CA5BP1Q8WTZ4 195 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 OR5B12Q96R08 314 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 ZNF251Q9BRH9 671 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 LINC00470Q9BZP3 86 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 GAR1Q9NY12 217 aaKnown RBP8.93□□□□□ -0.98
ACTN1-203ENST00000394419 RAMP3O60896 148 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 IL18BPO95998 194 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 HOXB1P14653 301 aaPredicted RBP8.93□□□□□ -0.98
ACTN1-203ENST00000394419 MDH2P40926 338 aaKnown RBP8.93□□□□□ -0.98
ACTN1-203ENST00000394419 ARL16Q0P5N6 197 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 ZNF324BQ6AW86 544 aaPredicted RBP8.93□□□□□ -0.98
ACTN1-203ENST00000394419 C1orf87Q8N0U7 546 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 OR10P1Q8NGE3 313 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 SNX22Q96L94 193 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 WASF3Q9UPY6 502 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 A0A1W2PPQ1 181 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 KIAA1324LA8MWY0 1029 aaPredicted RBP8.93□□□□□ -0.98
ACTN1-203ENST00000394419 ST8SIA5O15466 376 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 SMIM6P0DI80 62 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 ACP1P24666 158 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 S100A12P80511 92 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 ZNF124Q15973 351 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 Q6ZSR3 168 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 H1FOOQ8IZA3 346 aaPredicted RBP8.93□□□□□ -0.98
ACTN1-203ENST00000394419 TMEM178AQ8NBL3 297 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 DCTN5Q9BTE1 182 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 GPR61Q9BZJ8 451 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 GSN-AS1Q9NRJ2 163 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 LAMP3Q9UQV4 416 aa8.93□□□□□ -0.98
ACTN1-203ENST00000394419 IGKV3D-15A0A087WSY6 115 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 RNF212BA8MTL3 300 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 OR8U8P0C7N1 319 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 PSMB3P49720 205 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 PAX9P55771 341 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 ERVFRD-1P60508 538 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 SAXO1Q8IYX7 474 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 DEFB108BQ8NET1 73 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 CLDND2Q8NHS1 167 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 ZDHHC16Q969W1 377 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 RCC1LQ96I51 464 aaKnown RBP8.92□□□□□ -0.98
ACTN1-203ENST00000394419 GPR87Q9BY21 358 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 OR51I2Q9H344 312 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 RBKSQ9H477 322 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 TREM2Q9NZC2 230 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 TMEM30CPA0ZSE6 113 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 BCL2P10415 239 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 AGAP20933 346 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 SSTR5P35346 364 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 KHDC3LQ587J8 217 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 FFAR4Q5NUL3 377 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 NCR3LG1Q68D85 454 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 OPA3Q9H6K4 179 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 HEYLQ9NQ87 328 aaPredicted RBP8.92□□□□□ -0.98
ACTN1-203ENST00000394419 A0A1W2PPV4 95 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 CLDN34H7C241 214 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 IGKV1-5P01602 117 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 HSPB1P04792 205 aaKnown RBP8.92□□□□□ -0.98
ACTN1-203ENST00000394419 PSG7Q13046 419 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 GFI1BQ5VTD9 330 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 LYPD6BQ8NI32 183 aa8.92□□□□□ -0.98
ACTN1-203ENST00000394419 CHD3Q12873 2000 aaKnown RBP8.91□□□□□ -0.98
ACTN1-203ENST00000394419 DUXBA0A1W2PPF3 345 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 ZNF705GA8MUZ8 300 aaPredicted RBP8.91□□□□□ -0.98
ACTN1-203ENST00000394419 NKX2-8O15522 239 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 FCGR3BO75015 233 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 S1PR2O95136 353 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 HBZP02008 142 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 EGR1P18146 543 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 UCP2P55851 309 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 OR2Z1Q8NG97 314 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 FRZBQ92765 325 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 WDYHV1Q96HA8 205 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms