RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 DEFB132Q7Z7B7 95 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 CCL17Q92583 94 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 LPAR2Q9HBW0 351 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 OR51B2Q9Y5P1 312 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 TRAV8-6A0A0B4J262 113 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 CFDP00746 253 aaPredicted RBP11.8□□□□□ -0.52
USP49-203ENST00000394253 HOXA5P20719 270 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 ST6GAL2Q96JF0 529 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 TINAGQ9UJW2 476 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 FAM157AC9JC47 383 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 ASIPP42127 132 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 ZNF296Q8WUU4 475 aaPredicted RBP11.8□□□□□ -0.52
USP49-203ENST00000394253 PLSCR2Q9NRY7 297 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 ANOS1P23352 680 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 OTX1P32242 354 aaPredicted RBP11.8□□□□□ -0.52
USP49-203ENST00000394253 CDAP32320 146 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 TP53INP2Q8IXH6 220 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 RIMKLAQ8IXN7 391 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 C19orf24Q9BVV8 132 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 AURKAIP1Q9NWT8 199 aaPredicted RBP11.8□□□□□ -0.52
USP49-203ENST00000394253 NDUFB4O95168 129 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 MRPS11P82912 194 aaKnown RBP11.8□□□□□ -0.52
USP49-203ENST00000394253 ZNF415Q09FC8 603 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 KLF9Q13886 244 aaPredicted RBP11.8□□□□□ -0.52
USP49-203ENST00000394253 PPT2Q9UMR5 302 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 TSPO2Q5TGU0 170 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 DNM1P46Q6ZS02 220 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 OR2A4O95047 310 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 PLAUP00749 431 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 CRPP02741 224 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 OR2A7Q96R45 310 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 DHHO43323 396 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 MPZL1O95297 269 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 WDR38Q5JTN6 314 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 MRPL52Q86TS9 123 aaKnown RBP11.79□□□□□ -0.52
USP49-203ENST00000394253 RNF122Q9H9V4 155 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 NTMQ9P121 344 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 MPC1Q9Y5U8 109 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 HELZP42694 1942 aaKnown RBP11.79□□□□□ -0.52
USP49-203ENST00000394253 MVDP53602 400 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 J3QR06 171 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 ZNF750Q32MQ0 723 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 OR13H1Q8NG92 308 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 NUDT8Q8WV74 236 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 ZNF714Q96N38 554 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 XIRP1Q702N8 1843 aaKnown RBP11.79□□□□□ -0.52
USP49-203ENST00000394253 DNAJC25-GNG10A0A024R161 153 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 ALG1L2C9J202 215 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 UPK1AO00322 258 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 SKP2Q13309 424 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 PLPPR2Q96GM1 343 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 EDA2RQ9HAV5 297 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 SIT1Q9Y3P8 196 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 PKD1L3Q7Z443 1732 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 GDF9O60383 454 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 IGF2P01344 180 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 MESTQ5EB52 335 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 GZMHP20718 246 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 FCARP24071 287 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 SLC37A2Q8TED4 501 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 ASPDHA6ND91 283 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 CEACAM18A8MTB9 384 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 COX7A1P24310 79 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 TMEM50BP56557 158 aa11.79□□□□□ -0.52
USP49-203ENST00000394253 PSME4Q14997 1843 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 GFYI3L273 518 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 CA11O75493 328 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 GABRG2P18507 467 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 CXCL3P19876 107 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 ATOH7Q8N100 152 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 MRGPRX1Q96LB2 322 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 FOXB1Q99853 325 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 G6PC2Q9NQR9 355 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 TCRBV5S2A0A599 114 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 MUC1P15941 1255 aaPredicted RBP11.78□□□□□ -0.52
USP49-203ENST00000394253 RNFT1Q5M7Z0 435 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 MRGPRX3Q96LB0 322 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 DNAJC4Q9NNZ3 241 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 GLIPR1P48060 266 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 GFRALQ6UXV0 394 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 RNF182Q8N6D2 247 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 RFESDQ8TAC1 157 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 SLC25A15Q9Y619 301 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 PTPRFP10586 1907 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 CRYBG1Q9Y4K1 1723 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 DSPPQ9NZW4 1301 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 RRHO14718 337 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 GCM2O75603 506 aaPredicted RBP11.78□□□□□ -0.52
USP49-203ENST00000394253 KLK15Q9H2R5 256 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 SPANXDQ9BXN6 97 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 HCFC1R1Q9NWW0 138 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 DENND4AQ7Z401 1863 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 C4orf45Q96LM5 186 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 SFTPCP11686 197 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 PSG6Q00889 435 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 KRTCAP3Q53RY4 240 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 LRTM2Q8N967 370 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 YAE1D1Q9NRH1 226 aa11.78□□□□□ -0.52
USP49-203ENST00000394253 GAPTQ8N292 157 aa11.77□□□□□ -0.52
USP49-203ENST00000394253 ORAOV1Q8WV07 137 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms