RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 NPBWR2P48146 333 aa7.4□□□□□ -1.22
GABRA1-202ENST00000393943 ERHP84090 104 aaKnown RBP7.4□□□□□ -1.22
GABRA1-202ENST00000393943 PSG4Q00888 419 aa7.4□□□□□ -1.22
GABRA1-202ENST00000393943 C16orf47Q6ZP98 133 aaPredicted RBP7.4□□□□□ -1.22
GABRA1-202ENST00000393943 ZNF645Q8N7E2 425 aa7.4□□□□□ -1.22
GABRA1-202ENST00000393943 HELZP42694 1942 aaKnown RBP7.4□□□□□ -1.22
GABRA1-202ENST00000393943 CLDN14O95500 239 aa7.4□□□□□ -1.22
GABRA1-202ENST00000393943 HAND1O96004 215 aa7.4□□□□□ -1.22
GABRA1-202ENST00000393943 GRPP07492 148 aa7.4□□□□□ -1.22
GABRA1-202ENST00000393943 NUBP1P53384 320 aa7.4□□□□□ -1.22
GABRA1-202ENST00000393943 ATP5IP56385 69 aaPredicted RBP7.4□□□□□ -1.22
GABRA1-202ENST00000393943 WDFY1Q8IWB7 410 aa7.4□□□□□ -1.22
GABRA1-202ENST00000393943 NFAM1Q8NET5 270 aaPredicted RBP7.4□□□□□ -1.22
GABRA1-202ENST00000393943 CCDC74BQ96LY2 380 aa7.4□□□□□ -1.22
GABRA1-202ENST00000393943 FAM173AQ9BQD7 235 aa7.4□□□□□ -1.22
GABRA1-202ENST00000393943 C19orf24Q9BVV8 132 aa7.4□□□□□ -1.22
GABRA1-202ENST00000393943 QTRT1Q9BXR0 403 aaKnown RBP7.4□□□□□ -1.22
GABRA1-202ENST00000393943 MRPL18Q9H0U6 180 aaKnown RBP7.4□□□□□ -1.22
GABRA1-202ENST00000393943 GSX1Q9H4S2 264 aaPredicted RBP7.4□□□□□ -1.22
GABRA1-202ENST00000393943 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.4□□□□□ -1.23
GABRA1-202ENST00000393943 hCG_38984A0A1B0GV85 526 aa7.4□□□□□ -1.23
GABRA1-202ENST00000393943 HELTA6NFD8 242 aa7.4□□□□□ -1.23
GABRA1-202ENST00000393943 A8MWP6 167 aa7.4□□□□□ -1.23
GABRA1-202ENST00000393943 TCF21O43680 179 aa7.4□□□□□ -1.23
GABRA1-202ENST00000393943 ZNF205O95201 554 aa7.4□□□□□ -1.23
GABRA1-202ENST00000393943 IGLV3-19P01714 112 aa7.4□□□□□ -1.23
GABRA1-202ENST00000393943 SNAI3Q3KNW1 292 aa7.4□□□□□ -1.23
GABRA1-202ENST00000393943 WDR25Q64LD2 544 aaPredicted RBP7.4□□□□□ -1.23
GABRA1-202ENST00000393943 OR4S2Q8NH73 311 aa7.4□□□□□ -1.23
GABRA1-202ENST00000393943 ZPBPQ9BS86 351 aa7.4□□□□□ -1.23
GABRA1-202ENST00000393943 KLF13Q9Y2Y9 288 aaPredicted RBP7.4□□□□□ -1.23
GABRA1-202ENST00000393943 CLPSP04118 112 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 MPLP40238 635 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 TLE1Q04724 770 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 GTF2H5Q6ZYL4 71 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 GBGT1Q8N5D6 347 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 OR1L4Q8NGR5 311 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 RNF166Q96A37 237 aaPredicted RBP7.39□□□□□ -1.23
GABRA1-202ENST00000393943 NPVFQ9HCQ7 196 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 CDC42EP3Q9UKI2 254 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 FREM3P0C091 2139 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 NDUFB4O95168 129 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 MDKP21741 143 aaPredicted RBP7.39□□□□□ -1.23
GABRA1-202ENST00000393943 IER3P46695 156 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 CCL20P78556 96 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 SPATA45Q537H7 98 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 SPRED2Q7Z698 418 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 RPP25Q9BUL9 199 aaKnown RBP7.39□□□□□ -1.23
GABRA1-202ENST00000393943 PROB1E7EW31 1015 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 M0R1X1 148 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 SYNGR3O43761 229 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 HNF1AP20823 631 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 TEPPQ6URK8 271 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 C12orf54Q6X4T0 127 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 FGFRL1Q8N441 504 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 FAM216AQ8WUB2 273 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 SAP30LQ9HAJ7 183 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 TMEM106BQ9NUM4 274 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 ARL2-SNX15V9GYD0 113 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 A0A096LPE4 126 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 A0A1W2PPZ6 126 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 ISLRO14498 428 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 APCSP02743 223 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 USF1P22415 310 aaPredicted RBP7.39□□□□□ -1.23
GABRA1-202ENST00000393943 FOXL1Q12952 345 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 SPSB3Q6PJ21 355 aa7.39□□□□□ -1.23
GABRA1-202ENST00000393943 CBY3A6NI87 242 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 M0R2Z0 102 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 TNFSF13O75888 250 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 HYAL1Q12794 435 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 NMSQ5H8A3 153 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 OR51G1Q8NGK1 321 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 IL36BQ9NZH7 164 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 CLCF1Q9UBD9 225 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 GALR2O43603 387 aaPredicted RBP7.38□□□□□ -1.23
GABRA1-202ENST00000393943 CTSBP07858 339 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 GZMHP20718 246 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 ACTL10Q5JWF8 245 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 ASCL4Q6XD76 172 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 PQLC2Q6ZP29 291 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 FADS6Q8N9I5 356 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 TMEM178AQ8NBL3 297 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 STXBP6Q8NFX7 210 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 SPSB4Q96A44 273 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 FER1L6-AS2Q96M78 137 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 UCN2Q96RP3 112 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 SPSB2Q99619 263 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 DLEU1O43261 78 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 IGHV3-9P01782 118 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 LINC00271P0C7V0 271 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 GZMBP10144 247 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 IL3RAP26951 378 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 ZNF718Q3SXZ3 478 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 C1orf174Q8IYL3 243 aa7.38□□□□□ -1.23
GABRA1-202ENST00000393943 C1orf147Q96MC9 270 aaPredicted RBP7.38□□□□□ -1.23
GABRA1-202ENST00000393943 A0A0J9YW62 118 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 AMY1AP04745 511 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 HIST1H1EP10412 219 aaKnown RBP7.37□□□□□ -1.23
GABRA1-202ENST00000393943 SFTPCP11686 197 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 TMEM45BQ96B21 275 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms