RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 ZNF585BQ52M93 769 aa18.41■□□□□ 0.54
HMGA2-203ENST00000393578 LSM10Q969L4 123 aaKnown RBP18.41■□□□□ 0.54
HMGA2-203ENST00000393578 YPEL2Q96QA6 119 aa18.41■□□□□ 0.54
HMGA2-203ENST00000393578 PPIAL4AQ9Y536 164 aa18.41■□□□□ 0.54
HMGA2-203ENST00000393578 AUP1Q9Y679 476 aa18.41■□□□□ 0.54
HMGA2-203ENST00000393578 TRGV10A0A0A0MS01 117 aa18.41■□□□□ 0.54
HMGA2-203ENST00000393578 DEFB108AA8MXU0 73 aa18.41■□□□□ 0.54
HMGA2-203ENST00000393578 TMPRSS2O15393 492 aa18.41■□□□□ 0.54
HMGA2-203ENST00000393578 IGKV1-39P01597 117 aa18.41■□□□□ 0.54
HMGA2-203ENST00000393578 IGKV1D-39P04432 117 aa18.41■□□□□ 0.54
HMGA2-203ENST00000393578 LTC4SQ16873 150 aa18.41■□□□□ 0.54
HMGA2-203ENST00000393578 C5orf30Q96GV9 206 aa18.41■□□□□ 0.54
HMGA2-203ENST00000393578 PSG11Q9UQ72 335 aa18.41■□□□□ 0.54
HMGA2-203ENST00000393578 KBTBD11-OT1A0A1B0GTJ5 212 aa18.4■□□□□ 0.54
HMGA2-203ENST00000393578 A0A1B0GU03 582 aa18.4■□□□□ 0.54
HMGA2-203ENST00000393578 NMBP08949 121 aa18.4■□□□□ 0.54
HMGA2-203ENST00000393578 TPT1P13693 172 aaKnown RBP18.4■□□□□ 0.54
HMGA2-203ENST00000393578 P2RY1P47900 373 aa18.4■□□□□ 0.54
HMGA2-203ENST00000393578 CATR1Q13166 79 aa18.4■□□□□ 0.54
HMGA2-203ENST00000393578 MUC15Q8N387 334 aa18.4■□□□□ 0.54
HMGA2-203ENST00000393578 ZNF808Q8N4W9 903 aaPredicted RBP18.4■□□□□ 0.54
HMGA2-203ENST00000393578 TMEM204Q9BSN7 226 aa18.4■□□□□ 0.54
HMGA2-203ENST00000393578 CLN8Q9UBY8 286 aa18.4■□□□□ 0.54
HMGA2-203ENST00000393578 RCL1Q9Y2P8 373 aaKnown RBP18.4■□□□□ 0.54
HMGA2-203ENST00000393578 DIDO1Q9BTC0 2240 aaKnown RBP18.39■□□□□ 0.53
HMGA2-203ENST00000393578 LOXP28300 417 aaPredicted RBP18.39■□□□□ 0.53
HMGA2-203ENST00000393578 C17orf58Q2M2W7 97 aa18.39■□□□□ 0.53
HMGA2-203ENST00000393578 GPR157Q5UAW9 335 aa18.39■□□□□ 0.53
HMGA2-203ENST00000393578 DMBX1Q8NFW5 382 aa18.39■□□□□ 0.53
HMGA2-203ENST00000393578 TPRP12270 2363 aaKnown RBP18.39■□□□□ 0.53
HMGA2-203ENST00000393578 PKDREJQ9NTG1 2253 aa18.39■□□□□ 0.53
HMGA2-203ENST00000393578 ST8SIA5O15466 376 aa18.39■□□□□ 0.53
HMGA2-203ENST00000393578 ID3Q02535 119 aa18.39■□□□□ 0.53
HMGA2-203ENST00000393578 TCTEX1D1Q8N7M0 179 aa18.39■□□□□ 0.53
HMGA2-203ENST00000393578 CORO2AQ92828 525 aa18.39■□□□□ 0.53
HMGA2-203ENST00000393578 GPR146Q96CH1 333 aa18.39■□□□□ 0.53
HMGA2-203ENST00000393578 SLC25A32Q9H2D1 315 aa18.39■□□□□ 0.53
HMGA2-203ENST00000393578 SDHAF2Q9NX18 166 aa18.39■□□□□ 0.53
HMGA2-203ENST00000393578 LEUTXA8MZ59 168 aa18.38■□□□□ 0.53
HMGA2-203ENST00000393578 CXorf66Q5JRM2 361 aaPredicted RBP18.38■□□□□ 0.53
HMGA2-203ENST00000393578 ZNF66Q6ZN08 573 aa18.38■□□□□ 0.53
HMGA2-203ENST00000393578 BAP18Q8IXM2 172 aa18.38■□□□□ 0.53
HMGA2-203ENST00000393578 RNASE11Q8TAA1 199 aaKnown RBP18.38■□□□□ 0.53
HMGA2-203ENST00000393578 CITED4Q96RK1 184 aa18.38■□□□□ 0.53
HMGA2-203ENST00000393578 LINC00574Q9H8X3 128 aa18.38■□□□□ 0.53
HMGA2-203ENST00000393578 FAM212BQ9NTI7 297 aaPredicted RBP18.38■□□□□ 0.53
HMGA2-203ENST00000393578 A0A0G2JRQ6 117 aa18.37■□□□□ 0.53
HMGA2-203ENST00000393578 PITX3O75364 302 aa18.37■□□□□ 0.53
HMGA2-203ENST00000393578 PVALBP20472 110 aaPredicted RBP18.37■□□□□ 0.53
HMGA2-203ENST00000393578 RPL30P62888 115 aaKnown RBP18.37■□□□□ 0.53
HMGA2-203ENST00000393578 HSD17B10Q99714 261 aaKnown RBP18.37■□□□□ 0.53
HMGA2-203ENST00000393578 C11orf1Q9H5F2 150 aa18.37■□□□□ 0.53
HMGA2-203ENST00000393578 SMG1Q96Q15 3661 aaKnown RBP18.37■□□□□ 0.53
HMGA2-203ENST00000393578 DSCAML1Q8TD84 2053 aa18.37■□□□□ 0.53
HMGA2-203ENST00000393578 ARFGEF3Q5TH69 2177 aa18.37■□□□□ 0.53
HMGA2-203ENST00000393578 IGHV1-69-2A0A0G2JMI3 117 aa18.37■□□□□ 0.53
HMGA2-203ENST00000393578 ITGB1BP1O14713 200 aa18.37■□□□□ 0.53
HMGA2-203ENST00000393578 GPR137BO60478 399 aa18.37■□□□□ 0.53
HMGA2-203ENST00000393578 IGKV1-5P01602 117 aa18.37■□□□□ 0.53
HMGA2-203ENST00000393578 OMGP23515 440 aa18.37■□□□□ 0.53
HMGA2-203ENST00000393578 AKR1C2P52895 323 aa18.37■□□□□ 0.53
HMGA2-203ENST00000393578 TMEM33P57088 247 aa18.37■□□□□ 0.53
HMGA2-203ENST00000393578 C4orf17Q53FE4 359 aa18.37■□□□□ 0.53
HMGA2-203ENST00000393578 TCF23Q7RTU1 214 aa18.37■□□□□ 0.53
HMGA2-203ENST00000393578 SLC25A10Q9UBX3 287 aaPredicted RBP18.37■□□□□ 0.53
HMGA2-203ENST00000393578 ANKRD34BA5PLL1 514 aa18.36■□□□□ 0.53
HMGA2-203ENST00000393578 ZNF729A6NN14 1252 aaPredicted RBP18.36■□□□□ 0.53
HMGA2-203ENST00000393578 TNFRSF13BO14836 293 aaPredicted RBP18.36■□□□□ 0.53
HMGA2-203ENST00000393578 CLDN14O95500 239 aa18.36■□□□□ 0.53
HMGA2-203ENST00000393578 CLDN1O95832 211 aa18.36■□□□□ 0.53
HMGA2-203ENST00000393578 RRASP10301 218 aa18.36■□□□□ 0.53
HMGA2-203ENST00000393578 LPAR6P43657 344 aa18.36■□□□□ 0.53
HMGA2-203ENST00000393578 GPR12P47775 334 aa18.36■□□□□ 0.53
HMGA2-203ENST00000393578 POLR2GP62487 172 aaKnown RBP eCLIP18.36■□□□□ 0.53
HMGA2-203ENST00000393578 BTNL3Q6UXE8 466 aa18.36■□□□□ 0.53
HMGA2-203ENST00000393578 PDZD9Q8IXQ8 264 aa18.36■□□□□ 0.53
HMGA2-203ENST00000393578 TANC2Q9HCD6 1990 aa18.35■□□□□ 0.53
HMGA2-203ENST00000393578 hADV38S2A0JD32 116 aa18.35■□□□□ 0.53
HMGA2-203ENST00000393578 NDUFB7P17568 137 aa18.35■□□□□ 0.53
HMGA2-203ENST00000393578 EPHA1P21709 976 aa18.35■□□□□ 0.53
HMGA2-203ENST00000393578 EIF5AP63241 154 aaKnown RBP18.35■□□□□ 0.53
HMGA2-203ENST00000393578 TMEM30BQ3MIR4 351 aa18.35■□□□□ 0.53
HMGA2-203ENST00000393578 Q3ZCU0 254 aa18.35■□□□□ 0.53
HMGA2-203ENST00000393578 TCTEX1D2Q8WW35 142 aa18.35■□□□□ 0.53
HMGA2-203ENST00000393578 GFOD1Q9NXC2 390 aa18.35■□□□□ 0.53
HMGA2-203ENST00000393578 RAMP3O60896 148 aa18.35■□□□□ 0.53
HMGA2-203ENST00000393578 MMP9P14780 707 aa18.35■□□□□ 0.53
HMGA2-203ENST00000393578 MEF2CQ06413 473 aaPredicted RBP18.35■□□□□ 0.53
HMGA2-203ENST00000393578 COMMD7Q86VX2 200 aa18.35■□□□□ 0.53
HMGA2-203ENST00000393578 FGFRL1Q8N441 504 aa18.35■□□□□ 0.53
HMGA2-203ENST00000393578 MED9Q9NWA0 146 aa18.35■□□□□ 0.53
HMGA2-203ENST00000393578 FBXL17Q9UF56 701 aa18.35■□□□□ 0.53
HMGA2-203ENST00000393578 LINC00312Q9Y6C7 94 aa18.35■□□□□ 0.53
HMGA2-203ENST00000393578 SSSCA1O60232 199 aa18.34■□□□□ 0.53
HMGA2-203ENST00000393578 GAPDHP04406 335 aaKnown RBP18.34■□□□□ 0.53
HMGA2-203ENST00000393578 HFEQ30201 348 aa18.34■□□□□ 0.53
HMGA2-203ENST00000393578 FAM74A1Q5RGS3 127 aa18.34■□□□□ 0.53
HMGA2-203ENST00000393578 Q6ZRM9 215 aa18.34■□□□□ 0.53
HMGA2-203ENST00000393578 SPAG16Q8N0X2 631 aa18.34■□□□□ 0.53
HMGA2-203ENST00000393578 MAGT1Q9H0U3 335 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms