RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 C19orf12Q9NSK7 152 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 ANKRD11Q6UB99 2663 aaPredicted RBP7.56□□□□□ -1.2
TDP1-202ENST00000393452 C9JQL5 133 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 FAM90A26D6RGX4 464 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 AGPAT2O15120 278 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 NUPL2O15504 423 aaKnown RBP7.55□□□□□ -1.2
TDP1-202ENST00000393452 TSPAN15O95858 294 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 P0C879 139 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 CTRB1P17538 263 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 CCKARP32238 428 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 CD80P33681 288 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 CAMLGP49069 296 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 SULT1A1P50225 295 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 BRWD1-AS2P59051 145 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 TAS2R30P59541 319 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 RPL30P62888 115 aaKnown RBP7.55□□□□□ -1.2
TDP1-202ENST00000393452 FAM27E3Q08E93 113 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 SPRNQ5BIV9 151 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 CTRB2Q6GPI1 263 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 MRGPRGQ86SM5 289 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 DOLPP1Q86YN1 238 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 TCTEX1D1Q8N7M0 179 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 TPRX1Q8N7U7 411 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 ATP5SQ99766 215 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 RNF150Q9ULK6 438 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 MMP24Q9Y5R2 645 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 PCNX1Q96RV3 2341 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 ATP6V1G2-DDX39BF2Z307 99 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 TOR1AO14656 332 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 SNAPINO95295 136 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 ADH4P08319 380 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 SFTA3P0C7M3 94 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 PPP1CCP36873 323 aaKnown RBP7.55□□□□□ -1.2
TDP1-202ENST00000393452 RPS23P62266 143 aaKnown RBP7.55□□□□□ -1.2
TDP1-202ENST00000393452 ZNF616Q08AN1 781 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 STX12Q86Y82 276 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 TMEM217Q8N7C4 229 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 Q8NA96 180 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 OR2G3Q8NGZ4 309 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 FAM216AQ8WUB2 273 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 GNPNAT1Q96EK6 184 aaPredicted RBP7.55□□□□□ -1.2
TDP1-202ENST00000393452 SNX22Q96L94 193 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 HIPK2Q9H2X6 1198 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 TP53TG5Q9Y2B4 290 aa7.55□□□□□ -1.2
TDP1-202ENST00000393452 ODAMA1E959 279 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 MGST3O14880 152 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 SPINT2O43291 252 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 RAMP3O60896 148 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 DFFBO76075 338 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 PRH1P02810 166 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 GZMHP20718 246 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 BMP5P22003 454 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 CATR1Q13166 79 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 SP5Q6BEB4 398 aaPredicted RBP7.54□□□□□ -1.2
TDP1-202ENST00000393452 ALKBH2Q6NS38 261 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 TMEM182Q6ZP80 229 aaPredicted RBP7.54□□□□□ -1.2
TDP1-202ENST00000393452 MRPL37Q9BZE1 423 aaKnown RBP7.54□□□□□ -1.2
TDP1-202ENST00000393452 NCOR1P1Q9H4R4 102 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 DOCK11Q5JSL3 2073 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 A0A0G2JNJ9 132 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 A0A1B0GW64 132 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 PRRG2O14669 202 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 CD40P25942 277 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 DHRS7BQ6IAN0 325 aaPredicted RBP7.54□□□□□ -1.2
TDP1-202ENST00000393452 ZNF66Q6ZN08 573 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 MOGAT3Q86VF5 341 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 SPACA3Q8IXA5 215 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 LFNGQ8NES3 379 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 RFESDQ8TAC1 157 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 PPP1R35Q8TAP8 253 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 FAM222BQ8WU58 562 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 ITLN1Q8WWA0 313 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 DCTN5Q9BTE1 182 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 Q9UFV3 132 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 RFNGQ9Y644 331 aa7.54□□□□□ -1.2
TDP1-202ENST00000393452 TANC2Q9HCD6 1990 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 C17orf98A8MV24 154 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 H3BP45 60 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 F12P00748 615 aaPredicted RBP7.53□□□□□ -1.2
TDP1-202ENST00000393452 H2AFB1P0C5Y9 115 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 EDDM3AQ14507 147 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 GUK1Q16774 197 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 VHLLQ6RSH7 139 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 NUP37Q8NFH4 326 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 FAM213BQ8TBF2 198 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 HSD17B10Q99714 261 aaKnown RBP7.53□□□□□ -1.2
TDP1-202ENST00000393452 ESRP2Q9H6T0 727 aaKnown RBP7.53□□□□□ -1.2
TDP1-202ENST00000393452 ELOVL5Q9NYP7 299 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 HSPB7Q9UBY9 170 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 IL19Q9UHD0 177 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 ZNF835Q9Y2P0 537 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 HCFC1P51610 2035 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 LAMA5O15230 3695 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 PTPRQQ9UMZ3 2332 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 IGHV3-43A0A0B4J1X8 118 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 F2RL2O00254 374 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 SPRY3O43610 288 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 CLDN1O95832 211 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 CGB3P0DN86 165 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 CGB7P0DN87 165 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms