RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 OR51B2Q9Y5P1 312 aa11.35□□□□□ -0.59
LCA5-202ENST00000392959 IGKV1D-42A0A075B6H8 117 aa11.35□□□□□ -0.59
LCA5-202ENST00000392959 A6NDN8 102 aa11.35□□□□□ -0.59
LCA5-202ENST00000392959 HBZP02008 142 aa11.35□□□□□ -0.59
LCA5-202ENST00000392959 COL10A1Q03692 680 aa11.35□□□□□ -0.59
LCA5-202ENST00000392959 DGAT2L7PQ6IED9 249 aa11.35□□□□□ -0.59
LCA5-202ENST00000392959 ZNF788Q6ZQV5 615 aa11.35□□□□□ -0.59
LCA5-202ENST00000392959 BPIFA4PQ86YQ2 179 aa11.35□□□□□ -0.59
LCA5-202ENST00000392959 MARS2Q96GW9 593 aaKnown RBP11.35□□□□□ -0.59
LCA5-202ENST00000392959 PAXXQ9BUH6 204 aa11.35□□□□□ -0.59
LCA5-202ENST00000392959 TMUB1Q9BVT8 246 aa11.35□□□□□ -0.59
LCA5-202ENST00000392959 ZNF71Q9NQZ8 489 aaPredicted RBP11.35□□□□□ -0.59
LCA5-202ENST00000392959 IGHV3OR15-7A0A075B7D8 119 aa11.35□□□□□ -0.59
LCA5-202ENST00000392959 FHL5Q5TD97 284 aa11.35□□□□□ -0.59
LCA5-202ENST00000392959 HEXA-AS1Q9H8Q6 139 aa11.35□□□□□ -0.59
LCA5-202ENST00000392959 LY75O60449 1722 aa11.35□□□□□ -0.59
LCA5-202ENST00000392959 IFITM10A6NMD0 228 aa11.35□□□□□ -0.59
LCA5-202ENST00000392959 DNASE2O00115 360 aaPredicted RBP11.35□□□□□ -0.59
LCA5-202ENST00000392959 CD74P04233 296 aa11.35□□□□□ -0.59
LCA5-202ENST00000392959 SRP14P37108 136 aaKnown RBP11.35□□□□□ -0.59
LCA5-202ENST00000392959 HSPB9Q9BQS6 159 aa11.35□□□□□ -0.59
LCA5-202ENST00000392959 PCGF1Q9BSM1 259 aa11.35□□□□□ -0.59
LCA5-202ENST00000392959 PATE3B3GLJ2 98 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 SLC35B1P78383 322 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 COL5A1-AS1Q5SY13 56 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 OR8B3Q8NGG8 313 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 LILRB1Q8NHL6 650 aaPredicted RBP11.34□□□□□ -0.59
LCA5-202ENST00000392959 OR4C12Q96R67 309 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 OR8B2Q96RD0 313 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 TTTY12Q9BZ98 90 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 A8MWL6 223 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 RND3P61587 244 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 SLC35E4Q6ICL7 350 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 OR8A1Q8NGG7 326 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 ADIPOR1Q96A54 375 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 P2RX4Q99571 388 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 TMEM208Q9BTX3 173 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 SPTBN2O15020 2390 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 PGLYRP1O75594 196 aaPredicted RBP11.34□□□□□ -0.59
LCA5-202ENST00000392959 CELA2AP08217 269 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 GPR146Q96CH1 333 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 SNRNP40Q96DI7 357 aaKnown RBP11.34□□□□□ -0.59
LCA5-202ENST00000392959 G6PC2Q9NQR9 355 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 TMSB15BA0A087X1C1 80 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 APELAP0DMC3 54 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 UNC119Q13432 240 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 ASCL5Q7RTU5 278 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 FGFRL1Q8N441 504 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 NPTNQ9Y639 398 aa11.34□□□□□ -0.59
LCA5-202ENST00000392959 SPTBN1Q01082 2364 aaKnown RBP11.34□□□□□ -0.59
LCA5-202ENST00000392959 TMEM14DPA8MWL7 114 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 OR2H2O95918 312 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 REG1BP48304 166 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 SOSTQ9BQB4 213 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 GPR61Q9BZJ8 451 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 TMEM140Q9NV12 185 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 PTPRFP10586 1907 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 M0R296 226 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 HYPMO75409 117 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 FAM216AQ8WUB2 273 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 APOBEC4Q8WW27 367 aaKnown RBP11.33□□□□□ -0.6
LCA5-202ENST00000392959 MS4A3Q96HJ5 214 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 NUDT16L1Q9BRJ7 211 aaKnown RBP11.33□□□□□ -0.6
LCA5-202ENST00000392959 DHRS7CA6NNS2 312 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 GCGP01275 180 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 MPV17P39210 176 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 UCP2P55851 309 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 MMDQ15546 238 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 ZNF385CQ66K41 422 aaPredicted RBP11.33□□□□□ -0.6
LCA5-202ENST00000392959 LINC00518Q8N0U6 118 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 OR51M1Q9H341 326 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 SDK2Q58EX2 2172 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 EP300Q09472 2414 aaPredicted RBP11.33□□□□□ -0.6
LCA5-202ENST00000392959 CXorf65A6NEN9 183 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 K7N7A8 449 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 ID4P47928 161 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 HERVK_113P61574 105 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 OR52M1Q8NGK5 317 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 GPHA2Q96T91 129 aa11.33□□□□□ -0.6
LCA5-202ENST00000392959 MDC1Q14676 2089 aaKnown RBP11.32□□□□□ -0.6
LCA5-202ENST00000392959 B4E171 279 aa11.32□□□□□ -0.6
LCA5-202ENST00000392959 RECKO95980 971 aa11.32□□□□□ -0.6
LCA5-202ENST00000392959 HOXD4P09016 255 aaPredicted RBP11.32□□□□□ -0.6
LCA5-202ENST00000392959 DANCRP0C864 163 aa11.32□□□□□ -0.6
LCA5-202ENST00000392959 TSPAN7P41732 249 aa11.32□□□□□ -0.6
LCA5-202ENST00000392959 PSMB2P49721 201 aa11.32□□□□□ -0.6
LCA5-202ENST00000392959 FAM209BQ5JX69 171 aa11.32□□□□□ -0.6
LCA5-202ENST00000392959 RIPPLY2Q5TAB7 128 aa11.32□□□□□ -0.6
LCA5-202ENST00000392959 PQLC2Q6ZP29 291 aa11.32□□□□□ -0.6
LCA5-202ENST00000392959 OR1P1Q8NH06 330 aa11.32□□□□□ -0.6
LCA5-202ENST00000392959 Q96M66 194 aa11.32□□□□□ -0.6
LCA5-202ENST00000392959 TUBGCP6Q96RT7 1819 aa11.32□□□□□ -0.6
LCA5-202ENST00000392959 FAM90A26D6RGX4 464 aa11.32□□□□□ -0.6
LCA5-202ENST00000392959 RHBDL1O75783 438 aa11.32□□□□□ -0.6
LCA5-202ENST00000392959 CD8AP01732 235 aa11.32□□□□□ -0.6
LCA5-202ENST00000392959 SNRPCP09234 159 aaKnown RBP11.32□□□□□ -0.6
LCA5-202ENST00000392959 CRYBA2P53672 197 aa11.32□□□□□ -0.6
LCA5-202ENST00000392959 RPS11P62280 158 aaKnown RBP eCLIP11.32□□□□□ -0.6
LCA5-202ENST00000392959 SRSF9Q13242 221 aaKnown RBP eCLIP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms