RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 ZNF799Q96GE5 643 aa16.19■□□□□ 0.18
CCDC50-202ENST00000392456 NBASA2RRP1 2371 aa16.19■□□□□ 0.18
CCDC50-202ENST00000392456 OR6C6A6NF89 314 aa16.19■□□□□ 0.18
CCDC50-202ENST00000392456 KIR2DL2P43627 348 aaPredicted RBP16.19■□□□□ 0.18
CCDC50-202ENST00000392456 SMIM21Q3B7S5 101 aa16.19■□□□□ 0.18
CCDC50-202ENST00000392456 FAM214BQ7L5A3 538 aa16.19■□□□□ 0.18
CCDC50-202ENST00000392456 CNEP1R1Q8N9A8 125 aa16.19■□□□□ 0.18
CCDC50-202ENST00000392456 KCNK15Q9H427 330 aa16.19■□□□□ 0.18
CCDC50-202ENST00000392456 YPEL1O60688 119 aa16.18■□□□□ 0.18
CCDC50-202ENST00000392456 WDR1O75083 606 aa16.18■□□□□ 0.18
CCDC50-202ENST00000392456 CEBPGP53567 150 aa16.18■□□□□ 0.18
CCDC50-202ENST00000392456 TMEM183BQ1AE95 376 aa16.18■□□□□ 0.18
CCDC50-202ENST00000392456 Q6ZVH6 145 aa16.18■□□□□ 0.18
CCDC50-202ENST00000392456 COMMD2Q86X83 199 aa16.18■□□□□ 0.18
CCDC50-202ENST00000392456 YPEL2Q96QA6 119 aa16.18■□□□□ 0.18
CCDC50-202ENST00000392456 RAB18Q9NP72 206 aa16.18■□□□□ 0.18
CCDC50-202ENST00000392456 A0A1B0GV50 99 aa16.18■□□□□ 0.18
CCDC50-202ENST00000392456 CCL2P13500 99 aa16.18■□□□□ 0.18
CCDC50-202ENST00000392456 IGFBP3P17936 291 aaPredicted RBP16.18■□□□□ 0.18
CCDC50-202ENST00000392456 FCGR2CP31995 323 aa16.18■□□□□ 0.18
CCDC50-202ENST00000392456 IL15RAQ13261 267 aa16.18■□□□□ 0.18
CCDC50-202ENST00000392456 C2orf76Q3KRA6 126 aa16.18■□□□□ 0.18
CCDC50-202ENST00000392456 PRR30Q53SZ7 412 aaPredicted RBP16.18■□□□□ 0.18
CCDC50-202ENST00000392456 RPL12P30050 165 aaKnown RBP16.17■□□□□ 0.18
CCDC50-202ENST00000392456 HLA-DRB3P79483 266 aa16.17■□□□□ 0.18
CCDC50-202ENST00000392456 ZNF324BQ6AW86 544 aaPredicted RBP16.17■□□□□ 0.18
CCDC50-202ENST00000392456 ZNF66Q6ZN08 573 aa16.17■□□□□ 0.18
CCDC50-202ENST00000392456 ZNF627Q7L945 461 aa16.17■□□□□ 0.18
CCDC50-202ENST00000392456 RNF144BQ7Z419 303 aa16.17■□□□□ 0.18
CCDC50-202ENST00000392456 TMEM170AQ8WVE7 144 aa16.17■□□□□ 0.18
CCDC50-202ENST00000392456 FAM3DQ96BQ1 224 aa16.17■□□□□ 0.18
CCDC50-202ENST00000392456 CABLES2Q9BTV7 478 aa16.17■□□□□ 0.18
CCDC50-202ENST00000392456 GP6Q9HCN6 339 aa16.17■□□□□ 0.18
CCDC50-202ENST00000392456 ZNF581Q9P0T4 197 aa16.17■□□□□ 0.18
CCDC50-202ENST00000392456 PCNX1Q96RV3 2341 aa16.17■□□□□ 0.18
CCDC50-202ENST00000392456 PRH1P02810 166 aa16.17■□□□□ 0.18
CCDC50-202ENST00000392456 POC1AQ8NBT0 407 aa16.17■□□□□ 0.18
CCDC50-202ENST00000392456 OR2AE1Q8NHA4 323 aa16.17■□□□□ 0.18
CCDC50-202ENST00000392456 AQP3Q92482 292 aa16.17■□□□□ 0.18
CCDC50-202ENST00000392456 SMIM3Q9BZL3 60 aa16.17■□□□□ 0.18
CCDC50-202ENST00000392456 MOB1AQ9H8S9 216 aa16.17■□□□□ 0.18
CCDC50-202ENST00000392456 PLSCR4Q9NRQ2 329 aa16.17■□□□□ 0.18
CCDC50-202ENST00000392456 MEMO1Q9Y316 297 aa16.17■□□□□ 0.18
CCDC50-202ENST00000392456 PAM16Q9Y3D7 125 aa16.17■□□□□ 0.18
CCDC50-202ENST00000392456 RND3P61587 244 aa16.16■□□□□ 0.18
CCDC50-202ENST00000392456 NRN1LQ496H8 165 aa16.16■□□□□ 0.18
CCDC50-202ENST00000392456 TOMM20LQ6UXN7 152 aa16.16■□□□□ 0.18
CCDC50-202ENST00000392456 CYB561D1Q8N8Q1 229 aa16.16■□□□□ 0.18
CCDC50-202ENST00000392456 BCL2L2Q92843 193 aaPredicted RBP16.16■□□□□ 0.18
CCDC50-202ENST00000392456 CGGBP1Q9UFW8 167 aaPredicted RBP16.16■□□□□ 0.18
CCDC50-202ENST00000392456 FAM215AQ9Y5M1 114 aa16.16■□□□□ 0.18
CCDC50-202ENST00000392456 PRDX4Q13162 271 aa16.16■□□□□ 0.18
CCDC50-202ENST00000392456 KRTAP27-1Q3LI81 207 aa16.16■□□□□ 0.18
CCDC50-202ENST00000392456 UNQ5815/PRO19632Q6UWF5 114 aa16.16■□□□□ 0.18
CCDC50-202ENST00000392456 SPTSSAQ969W0 71 aa16.16■□□□□ 0.18
CCDC50-202ENST00000392456 GPR146Q96CH1 333 aa16.16■□□□□ 0.18
CCDC50-202ENST00000392456 OR10C1Q96KK4 312 aa16.16■□□□□ 0.18
CCDC50-202ENST00000392456 ELL3Q9HB65 397 aaPredicted RBP16.16■□□□□ 0.18
CCDC50-202ENST00000392456 MYO7BQ6PIF6 2116 aa16.15■□□□□ 0.18
CCDC50-202ENST00000392456 A0A1B0GU03 582 aa16.15■□□□□ 0.18
CCDC50-202ENST00000392456 A0A1W2PR80 420 aa16.15■□□□□ 0.18
CCDC50-202ENST00000392456 IGLV3-1P01715 115 aa16.15■□□□□ 0.18
CCDC50-202ENST00000392456 PCBD1P61457 104 aa16.15■□□□□ 0.18
CCDC50-202ENST00000392456 ZNF880Q6PDB4 577 aa16.15■□□□□ 0.18
CCDC50-202ENST00000392456 FAM180AQ6UWF9 173 aa16.15■□□□□ 0.18
CCDC50-202ENST00000392456 FAM89BQ8N5H3 189 aa16.15■□□□□ 0.18
CCDC50-202ENST00000392456 PINX1Q96BK5 328 aaKnown RBP16.15■□□□□ 0.18
CCDC50-202ENST00000392456 C2orf50Q96LR7 162 aa16.15■□□□□ 0.18
CCDC50-202ENST00000392456 MS4A10Q96PG2 267 aa16.15■□□□□ 0.18
CCDC50-202ENST00000392456 PYGO2Q9BRQ0 406 aa16.15■□□□□ 0.18
CCDC50-202ENST00000392456 OR6C3Q9NZP0 311 aa16.15■□□□□ 0.18
CCDC50-202ENST00000392456 FUT9Q9Y231 359 aa16.15■□□□□ 0.18
CCDC50-202ENST00000392456 K7ERU9 68 aa16.14■□□□□ 0.18
CCDC50-202ENST00000392456 IGHV1-2P23083 117 aa16.14■□□□□ 0.18
CCDC50-202ENST00000392456 RIPPLY3P57055 190 aa16.14■□□□□ 0.18
CCDC50-202ENST00000392456 S100A10P60903 97 aa16.14■□□□□ 0.18
CCDC50-202ENST00000392456 GNB2P62879 340 aa16.14■□□□□ 0.18
CCDC50-202ENST00000392456 CCL20P78556 96 aa16.14■□□□□ 0.18
CCDC50-202ENST00000392456 IL24Q13007 206 aa16.14■□□□□ 0.18
CCDC50-202ENST00000392456 TPTE2P1Q5T6R2 138 aa16.14■□□□□ 0.18
CCDC50-202ENST00000392456 OR1K1Q8NGR3 316 aa16.14■□□□□ 0.18
CCDC50-202ENST00000392456 MED19A0JLT2 244 aaPredicted RBP16.14■□□□□ 0.17
CCDC50-202ENST00000392456 SLC17A2O00624 439 aa16.14■□□□□ 0.17
CCDC50-202ENST00000392456 LYZL6O75951 148 aa16.14■□□□□ 0.17
CCDC50-202ENST00000392456 STAG3L3P0CL85 134 aa16.14■□□□□ 0.17
CCDC50-202ENST00000392456 ZNF584Q8IVC4 421 aa16.14■□□□□ 0.17
CCDC50-202ENST00000392456 PKD1L2Q7Z442 2459 aa16.14■□□□□ 0.17
CCDC50-202ENST00000392456 FSTP19883 344 aa16.13■□□□□ 0.17
CCDC50-202ENST00000392456 CCL1P22362 96 aa16.13■□□□□ 0.17
CCDC50-202ENST00000392456 SLC22A6Q4U2R8 563 aa16.13■□□□□ 0.17
CCDC50-202ENST00000392456 SNRNP40Q96DI7 357 aaKnown RBP16.13■□□□□ 0.17
CCDC50-202ENST00000392456 SPACA5Q96QH8 159 aa16.13■□□□□ 0.17
CCDC50-202ENST00000392456 VAMP8Q9BV40 100 aa16.13■□□□□ 0.17
CCDC50-202ENST00000392456 SMPXQ9UHP9 88 aa16.13■□□□□ 0.17
CCDC50-202ENST00000392456 LAMTOR2Q9Y2Q5 125 aa16.13■□□□□ 0.17
CCDC50-202ENST00000392456 ADGRG4Q8IZF6 3080 aa16.13■□□□□ 0.17
CCDC50-202ENST00000392456 K7N7A8 449 aa16.13■□□□□ 0.17
CCDC50-202ENST00000392456 BMP5P22003 454 aa16.13■□□□□ 0.17
CCDC50-202ENST00000392456 CCNOP22674 350 aa16.13■□□□□ 0.17
CCDC50-202ENST00000392456 CNN3Q15417 329 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms