RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 ABHD14AQ9BUJ0 271 aa12.93□□□□□ -0.34
CCDC50-201ENST00000392455 HPRT1P00492 218 aa12.93□□□□□ -0.34
CCDC50-201ENST00000392455 SAPCD1Q5SSQ6 148 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 Q6AWC8 147 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 CLEC2AQ6UVW9 174 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 UNQ9370/PRO34162Q6UXP9 181 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 ADAP1O75689 374 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 CEACAM5P06731 702 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 PLPPR2Q96GM1 343 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 IGFBP6P24592 240 aaPredicted RBP12.92□□□□□ -0.34
CCDC50-201ENST00000392455 PCP4P48539 62 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.92□□□□□ -0.34
CCDC50-201ENST00000392455 ZNF414Q96IQ9 312 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 G6PC2Q9NQR9 355 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 PRICKLE4Q2TBC4 344 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 CLEC18BQ6UXF7 455 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 SF3B6Q9Y3B4 125 aaKnown RBP12.92□□□□□ -0.34
CCDC50-201ENST00000392455 NIT1Q86X76 327 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 VKORC1L1Q8N0U8 176 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 OR1K1Q8NGR3 316 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 MRGPRDQ8TDS7 321 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 A0A0A6YYD5 115 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 RHBDD2Q6NTF9 364 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 OR10S1Q8NGN2 331 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 DYSFO75923 2080 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 FAM90A27PA6NNH2 459 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 NUBP1P53384 320 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 MEF2BQ02080 365 aaPredicted RBP12.92□□□□□ -0.34
CCDC50-201ENST00000392455 SLC16A13Q7RTY0 426 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 RNF7Q9UBF6 113 aa12.92□□□□□ -0.34
CCDC50-201ENST00000392455 PPYP01298 95 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 CRPP02741 224 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 ANOS1P23352 680 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 OR4D5Q8NGN0 318 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 TNFRSF19Q9NS68 423 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 CEACAM18A8MTB9 384 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 TRGC2P03986 189 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 FAM209BQ5JX69 171 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 MYEOVQ96EZ4 313 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 MRPL32Q9BYC8 188 aaKnown RBP12.91□□□□□ -0.34
CCDC50-201ENST00000392455 MMP25Q9NPA2 562 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 A0A1W2PR80 420 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 HMX2A2RU54 273 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 HSPB1P04792 205 aaKnown RBP12.91□□□□□ -0.34
CCDC50-201ENST00000392455 RNF224P0DH78 156 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 DDTP30046 118 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 ANKRD34AQ69YU3 496 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 CFAP161Q6P656 301 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 KIRREL2Q6UWL6 708 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 SPEM1Q8N4L4 309 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 PRDM14Q9GZV8 571 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 A0A0B4J2E0 115 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 A0A1B0GX12 115 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 FAM90A26D6RGX4 464 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 SSBP4Q9BWG4 385 aaPredicted RBP12.91□□□□□ -0.34
CCDC50-201ENST00000392455 STRCQ7RTU9 1775 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 CA7P43166 264 aa12.91□□□□□ -0.34
CCDC50-201ENST00000392455 WIPI1Q5MNZ9 446 aaPredicted RBP12.9□□□□□ -0.34
CCDC50-201ENST00000392455 Q6ZNB5 142 aa12.9□□□□□ -0.34
CCDC50-201ENST00000392455 NXT2Q9NPJ8 142 aaKnown RBP12.9□□□□□ -0.34
CCDC50-201ENST00000392455 FSCN3Q9NQT6 498 aa12.9□□□□□ -0.34
CCDC50-201ENST00000392455 CT83Q5H943 113 aa12.9□□□□□ -0.34
CCDC50-201ENST00000392455 OR1P1Q8NH06 330 aa12.9□□□□□ -0.34
CCDC50-201ENST00000392455 MS4A7Q9GZW8 240 aaPredicted RBP12.9□□□□□ -0.34
CCDC50-201ENST00000392455 MS4A6AQ9H2W1 248 aa12.9□□□□□ -0.34
CCDC50-201ENST00000392455 CBLN4Q9NTU7 201 aa12.9□□□□□ -0.34
CCDC50-201ENST00000392455 DEFB108AA8MXU0 73 aa12.9□□□□□ -0.34
CCDC50-201ENST00000392455 TMEM50AO95807 157 aa12.9□□□□□ -0.34
CCDC50-201ENST00000392455 HOXD3P31249 432 aaPredicted RBP12.9□□□□□ -0.34
CCDC50-201ENST00000392455 MPLP40238 635 aa12.9□□□□□ -0.34
CCDC50-201ENST00000392455 TMEM171Q8WVE6 324 aa12.9□□□□□ -0.34
CCDC50-201ENST00000392455 TMEM179BQ7Z7N9 219 aa12.9□□□□□ -0.34
CCDC50-201ENST00000392455 ABHD3Q8WU67 409 aa12.9□□□□□ -0.34
CCDC50-201ENST00000392455 HOXA5P20719 270 aa12.9□□□□□ -0.34
CCDC50-201ENST00000392455 TMEM86BQ8N661 226 aa12.9□□□□□ -0.34
CCDC50-201ENST00000392455 OR51M1Q9H341 326 aa12.9□□□□□ -0.34
CCDC50-201ENST00000392455 SERGEFQ9UGK8 458 aa12.9□□□□□ -0.34
CCDC50-201ENST00000392455 SSMEM1Q8WWF3 244 aa12.9□□□□□ -0.34
CCDC50-201ENST00000392455 TMEM196Q5HYL7 178 aa12.9□□□□□ -0.35
CCDC50-201ENST00000392455 NCMAPQ5T1S8 102 aa12.9□□□□□ -0.35
CCDC50-201ENST00000392455 ARL6IP6Q8N6S5 226 aa12.9□□□□□ -0.35
CCDC50-201ENST00000392455 PAGE4O60829 102 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 SLC25A35Q3KQZ1 300 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 FAM159AQ6UWV7 190 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 MARS2Q96GW9 593 aaKnown RBP12.89□□□□□ -0.35
CCDC50-201ENST00000392455 SLC25A2Q9BXI2 301 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 TCRBV5S2A0A599 114 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 UCNP55089 124 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 GUCA2AQ02747 115 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 FZD5Q13467 585 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 ZNF56Q15929 161 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 ZNF324BQ6AW86 544 aaPredicted RBP12.89□□□□□ -0.35
CCDC50-201ENST00000392455 TRBV23-1A0A0A0MS06 115 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 INO80CQ6PI98 192 aaPredicted RBP12.89□□□□□ -0.35
CCDC50-201ENST00000392455 TREM2Q9NZC2 230 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 C9orf172C9J069 976 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 FAM157AC9JC47 383 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 ARG1P05089 322 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 PLNP26678 52 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 GUSBP11Q6P575 273 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms