RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 RPLP1P05386 114 aaKnown RBP15.04■□□□□ -0
SQSTM1-202ENST00000389805 SCTP09683 121 aa15.04■□□□□ -0
SQSTM1-202ENST00000389805 SRPXP78539 464 aa15.04■□□□□ -0
SQSTM1-202ENST00000389805 ARL16Q0P5N6 197 aa15.04■□□□□ -0
SQSTM1-202ENST00000389805 MALLQ13021 153 aa15.04■□□□□ -0
SQSTM1-202ENST00000389805 C1orf194Q5T5A4 169 aa15.04■□□□□ -0
SQSTM1-202ENST00000389805 TMEM42Q69YG0 159 aa15.04■□□□□ -0
SQSTM1-202ENST00000389805 GATAD1Q8WUU5 269 aa15.04■□□□□ -0
SQSTM1-202ENST00000389805 IL22RA2Q969J5 263 aa15.04■□□□□ -0
SQSTM1-202ENST00000389805 ACY3Q96HD9 319 aa15.04■□□□□ -0
SQSTM1-202ENST00000389805 DIRC2Q96SL1 478 aa15.04■□□□□ -0
SQSTM1-202ENST00000389805 OPN3Q9H1Y3 402 aaPredicted RBP15.04■□□□□ -0
SQSTM1-202ENST00000389805 VDAC1P21796 283 aa15.03■□□□□ -0
SQSTM1-202ENST00000389805 DCAF10Q5QP82 559 aa15.03■□□□□ -0
SQSTM1-202ENST00000389805 RIPPLY2Q5TAB7 128 aa15.03■□□□□ -0
SQSTM1-202ENST00000389805 TBX15Q96SF7 602 aa15.03■□□□□ -0
SQSTM1-202ENST00000389805 PYGO2Q9BRQ0 406 aa15.03■□□□□ -0
SQSTM1-202ENST00000389805 RNF115Q9Y4L5 304 aa15.03■□□□□ -0
SQSTM1-202ENST00000389805 C3orf80F5H4A9 247 aa15.03■□□□□ -0
SQSTM1-202ENST00000389805 LHX2P50458 406 aa15.03■□□□□ -0
SQSTM1-202ENST00000389805 ARSJQ5FYB0 599 aaPredicted RBP15.03■□□□□ -0
SQSTM1-202ENST00000389805 ABHD17BQ5VST6 288 aa15.03■□□□□ -0
SQSTM1-202ENST00000389805 DPPA3Q6W0C5 159 aa15.03■□□□□ -0
SQSTM1-202ENST00000389805 OR51H1Q8NH63 302 aa15.03■□□□□ -0
SQSTM1-202ENST00000389805 LHX4Q969G2 390 aa15.03■□□□□ -0
SQSTM1-202ENST00000389805 PRRG4Q9BZD6 226 aa15.03■□□□□ -0
SQSTM1-202ENST00000389805 NAGKQ9UJ70 344 aa15.03■□□□□ -0
SQSTM1-202ENST00000389805 BOKQ9UMX3 212 aaPredicted RBP15.03■□□□□ -0
SQSTM1-202ENST00000389805 SELEP16581 610 aa15.03■□□□□ -0
SQSTM1-202ENST00000389805 CHRNA7P36544 502 aa15.03■□□□□ -0
SQSTM1-202ENST00000389805 HS3ST6Q96QI5 342 aa15.03■□□□□ -0
SQSTM1-202ENST00000389805 ZNF703Q9H7S9 590 aaPredicted RBP15.03■□□□□ -0
SQSTM1-202ENST00000389805 ESPL1Q14674 2120 aa15.02■□□□□ -0
SQSTM1-202ENST00000389805 MDH2P40926 338 aaKnown RBP15.02■□□□□ -0
SQSTM1-202ENST00000389805 OR1C1Q15619 314 aa15.02■□□□□ -0
SQSTM1-202ENST00000389805 LHFPL2Q6ZUX7 228 aa15.02■□□□□ -0
SQSTM1-202ENST00000389805 MRGPRGQ86SM5 289 aa15.02■□□□□ -0
SQSTM1-202ENST00000389805 ZNF295-AS1Q8N0V1 137 aa15.02■□□□□ -0
SQSTM1-202ENST00000389805 GBGT1Q8N5D6 347 aa15.02■□□□□ -0
SQSTM1-202ENST00000389805 OR1K1Q8NGR3 316 aa15.02■□□□□ -0
SQSTM1-202ENST00000389805 OR51I2Q9H344 312 aa15.02■□□□□ -0
SQSTM1-202ENST00000389805 HPRT1P00492 218 aa15.02□□□□□ -0.01
SQSTM1-202ENST00000389805 TFPI2P48307 235 aa15.02□□□□□ -0.01
SQSTM1-202ENST00000389805 PDLIM4P50479 330 aa15.02□□□□□ -0.01
SQSTM1-202ENST00000389805 OR2T10Q8NGZ9 312 aa15.02□□□□□ -0.01
SQSTM1-202ENST00000389805 TMEM210A6NLX4 147 aa15.01□□□□□ -0.01
SQSTM1-202ENST00000389805 PDCD6O75340 191 aa15.01□□□□□ -0.01
SQSTM1-202ENST00000389805 HRASP01112 189 aa15.01□□□□□ -0.01
SQSTM1-202ENST00000389805 CNN1P51911 297 aaKnown RBP15.01□□□□□ -0.01
SQSTM1-202ENST00000389805 CLDN18P56856 261 aa15.01□□□□□ -0.01
SQSTM1-202ENST00000389805 PCBD1P61457 104 aa15.01□□□□□ -0.01
SQSTM1-202ENST00000389805 CYP2G1PQ6ZSU1 146 aa15.01□□□□□ -0.01
SQSTM1-202ENST00000389805 DTD1Q8TEA8 209 aa15.01□□□□□ -0.01
SQSTM1-202ENST00000389805 MS4A10Q96PG2 267 aa15.01□□□□□ -0.01
SQSTM1-202ENST00000389805 FAM173AQ9BQD7 235 aa15.01□□□□□ -0.01
SQSTM1-202ENST00000389805 PARLQ9H300 379 aa15.01□□□□□ -0.01
SQSTM1-202ENST00000389805 ZFHX4Q86UP3 3567 aa15.01□□□□□ -0.01
SQSTM1-202ENST00000389805 DAZAP2Q15038 168 aaPredicted RBP15.01□□□□□ -0.01
SQSTM1-202ENST00000389805 ACTL10Q5JWF8 245 aa15.01□□□□□ -0.01
SQSTM1-202ENST00000389805 DHRS13Q6UX07 377 aa15.01□□□□□ -0.01
SQSTM1-202ENST00000389805 P2RX4Q99571 388 aa15.01□□□□□ -0.01
SQSTM1-202ENST00000389805 SLC39A9Q9NUM3 307 aa15.01□□□□□ -0.01
SQSTM1-202ENST00000389805 C5orf49A4QMS7 147 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 BMP5P22003 454 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 CCKARP32238 428 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 FUT6P51993 359 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 MEF2BQ02080 365 aaPredicted RBP15□□□□□ -0.01
SQSTM1-202ENST00000389805 OR8B8Q15620 311 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 TGIF2LYQ8IUE0 185 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 ZNF611Q8N823 705 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 OR4F5Q8NH21 305 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 MBD3L1Q8WWY6 194 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 GPR146Q96CH1 333 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 OR4F4Q96R69 305 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 TTTY12Q9BZ98 90 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 KBTBD11O94819 623 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 NGFP01138 241 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 CD59P13987 128 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 ATP1A1-AS1Q5TC04 95 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 TOMM20LQ6UXN7 152 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 ASCL4Q6XD76 172 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 Q6ZRM9 215 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 OR56B2PQ8NGI1 322 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 SLC25A22Q9H936 323 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 OR6C3Q9NZP0 311 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 MRPS18CQ9Y3D5 142 aaKnown RBP15□□□□□ -0.01
SQSTM1-202ENST00000389805 ZNF816-ZNF321PA0A0X1KG74 233 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 SLC22A20A6NK97 555 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 SP9P0CG40 484 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 TMEM251Q8N6I4 163 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 MRPL30Q8TCC3 161 aaKnown RBP15□□□□□ -0.01
SQSTM1-202ENST00000389805 ZPBPQ9BS86 351 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 FGF23Q9GZV9 251 aaPredicted RBP15□□□□□ -0.01
SQSTM1-202ENST00000389805 PAM16Q9Y3D7 125 aa15□□□□□ -0.01
SQSTM1-202ENST00000389805 SPENQ96T58 3664 aaKnown RBP15□□□□□ -0.01
SQSTM1-202ENST00000389805 KIR2DL5BA0A0G2JN68 375 aa14.99□□□□□ -0.01
SQSTM1-202ENST00000389805 KIR2DL5BA0A0G2JPC4 375 aa14.99□□□□□ -0.01
SQSTM1-202ENST00000389805 PCNX2A6NKB5 2137 aa14.99□□□□□ -0.01
SQSTM1-202ENST00000389805 CDX4O14627 284 aaPredicted RBP14.99□□□□□ -0.01
SQSTM1-202ENST00000389805 IGKV1D-33P01593 117 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms