RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 GAPDHP04406 335 aaKnown RBP-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 SERPINE1P05121 402 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 CRYGCP07315 174 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 PABPC4LP0CB38 370 aaKnown RBP-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 CT45A8P0DMV1 189 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 CT45A9P0DMV2 189 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 BCL2P10415 239 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 CCND3P30281 292 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 UGT2B10P36537 528 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 SLC1A2P43004 574 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 PITPNBP48739 271 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 CEBPGP53567 150 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 ACTR3P61158 418 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 TMEM258P61165 79 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 POLR2GP62487 172 aaKnown RBP eCLIP-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 RPP38P78345 283 aaKnown RBP-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 USF2Q15853 346 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 SMU1Q2TAY7 513 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 KLHL40Q2TBA0 621 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 AGKQ53H12 422 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 BOLA3Q53S33 107 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 CT45A2Q5DJT8 189 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 C1orf140Q5VVS0 124 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 CD200R1LQ6Q8B3 271 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 SETD3Q86TU7 594 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 VPS36Q86VN1 386 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR8I2Q8N0Y5 310 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 NECAB1Q8N987 351 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR8J2Q8NGG1 315 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR8B3Q8NGG8 313 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR1S2Q8NGQ3 325 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 CT45A3Q8NHU0 189 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 FNDC9Q8TBE3 224 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 PNPT1Q8TCS8 783 aaKnown RBP-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 SMIM11BQ8TCY0 68 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 Q8WTZ3 238 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 ABHD3Q8WU67 409 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 SPRYD4Q8WW59 207 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 CCT6BQ92526 530 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 PGAM5Q96HS1 289 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 USMG5Q96IX5 58 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 FAM111AQ96PZ2 611 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 PLIN2Q99541 437 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 CCT7Q99832 543 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 Q9BRP9 147 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 ATG101Q9BSB4 218 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 NTMT1Q9BV86 223 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 SRRQ9GZT4 340 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 MFFQ9GZY8 342 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 ILKAPQ9H0C8 392 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 WFDC10AQ9H1F0 79 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 RSPH9Q9H1X1 276 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 PIH1D3Q9NQM4 214 aaKnown RBP-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 OLAHQ9NV23 265 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 MRPL35Q9NZE8 188 aaKnown RBP-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 ZMAT5Q9UDW3 170 aaKnown RBP-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 LGALS13Q9UHV8 139 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 TAGLN3Q9UI15 199 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 CYSLTR1Q9Y271 337 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 NUP210LQ5VU65 1888 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 PLCH1Q4KWH8 1693 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 ABCB11O95342 1321 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 DSPPQ9NZW4 1301 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 SETBP1Q9Y6X0 1596 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 BTAF1O14981 1849 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 TEX14Q8IWB6 1497 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 MRC2Q9UBG0 1479 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 LY75O60449 1722 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 PARP4Q9UKK3 1724 aaKnown RBP-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 A0A075B6Q4 140 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 A0A0B4J2A0 478 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 EDDM13A0A1B0GTR0 161 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 METTL15A6NJ78 407 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 SAGE2PA6NJ88 616 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 ANKRD30BLA7E2S9 258 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 C21orf140B9A014 251 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 HCG22E2RYF7 251 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 F8VRH5 84 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 M0R233 179 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 EI24O14681 340 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 MPZL2O60487 215 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 RANBP6O60518 1105 aaKnown RBP-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 RAMP1O60894 148 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 CTNSO60931 367 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 TDP2O95551 362 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 FBP1P09467 338 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 CLTBP09497 229 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 MPC1LP0DKB6 136 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 IDO1P14902 403 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 GGT1P19440 569 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 PSMA4P25789 261 aaKnown RBP-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 MPV17P39210 176 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 PTGFRP43088 359 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR3A1P47881 315 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 GPX6P59796 221 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 BNIP1Q12981 228 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 ATP6AP1LQ52LC2 224 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 HSP90AA4PQ58FG1 418 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 LINC01556Q5JQF7 62 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 C10orf120Q5SQS8 335 aa-1.94□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms