RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 ZNF318Q5VUA4 2279 aa11.81□□□□□ -0.52
SDC1-202ENST00000381150 SYNGR2O43760 224 aa11.81□□□□□ -0.52
SDC1-202ENST00000381150 RAB4AP20338 218 aa11.81□□□□□ -0.52
SDC1-202ENST00000381150 HBG1P69891 147 aa11.81□□□□□ -0.52
SDC1-202ENST00000381150 HBG2P69892 147 aa11.81□□□□□ -0.52
SDC1-202ENST00000381150 ACOT6Q3I5F7 207 aaPredicted RBP11.81□□□□□ -0.52
SDC1-202ENST00000381150 AGBL5Q8NDL9 886 aa11.81□□□□□ -0.52
SDC1-202ENST00000381150 OR8G5Q8NG78 346 aa11.81□□□□□ -0.52
SDC1-202ENST00000381150 PLPPR1Q8TBJ4 325 aa11.81□□□□□ -0.52
SDC1-202ENST00000381150 RNASEH2CQ8TDP1 164 aaKnown RBP11.81□□□□□ -0.52
SDC1-202ENST00000381150 SSC4DQ8WTU2 575 aa11.81□□□□□ -0.52
SDC1-202ENST00000381150 TMEM170AQ8WVE7 144 aa11.81□□□□□ -0.52
SDC1-202ENST00000381150 CCKARP32238 428 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 GPM6AP51674 278 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 ERASQ7Z444 233 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 ACY3Q96HD9 319 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 VAMP8Q9BV40 100 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 DECR2Q9NUI1 292 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 CEP250Q9BV73 2442 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 CLEC18AA5D8T8 446 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 KBTBD11O94819 623 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 ZNF32P17041 273 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 BCL3P20749 454 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 Q6ZVH6 145 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 RPP25LQ8N5L8 163 aaKnown RBP11.8□□□□□ -0.52
SDC1-202ENST00000381150 CLEC18CQ8NCF0 446 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 SGMS2Q8NHU3 365 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 DNAJC4Q9NNZ3 241 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 RNF150Q9ULK6 438 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 A0A0U1RQV5 110 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 LIFP15018 202 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 CTSSP25774 331 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 MPLP40238 635 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 IGFBP7Q16270 282 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 OR2Y1Q8NGV0 311 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 TXN2Q99757 166 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 TMEM242Q9NWH2 141 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 OR6C3Q9NZP0 311 aa11.8□□□□□ -0.52
SDC1-202ENST00000381150 KIAA1549Q9HCM3 1950 aa11.79□□□□□ -0.52
SDC1-202ENST00000381150 PGLYRP1O75594 196 aaPredicted RBP11.79□□□□□ -0.52
SDC1-202ENST00000381150 IL3RAP26951 378 aa11.79□□□□□ -0.52
SDC1-202ENST00000381150 SLC38A11Q08AI6 406 aa11.79□□□□□ -0.52
SDC1-202ENST00000381150 C1orf194Q5T5A4 169 aa11.79□□□□□ -0.52
SDC1-202ENST00000381150 CYP2G1PQ6ZSU1 146 aa11.79□□□□□ -0.52
SDC1-202ENST00000381150 GBGT1Q8N5D6 347 aa11.79□□□□□ -0.52
SDC1-202ENST00000381150 OR10G4Q8NGN3 311 aa11.79□□□□□ -0.52
SDC1-202ENST00000381150 OR10G9Q8NGN4 311 aa11.79□□□□□ -0.52
SDC1-202ENST00000381150 OR10G7Q8NGN6 311 aa11.79□□□□□ -0.52
SDC1-202ENST00000381150 LPAR2Q9HBW0 351 aa11.79□□□□□ -0.52
SDC1-202ENST00000381150 SIRPB1O00241 398 aa11.79□□□□□ -0.52
SDC1-202ENST00000381150 TNFSF11O14788 317 aa11.79□□□□□ -0.52
SDC1-202ENST00000381150 KRASP01116 189 aa11.79□□□□□ -0.52
SDC1-202ENST00000381150 IGLV3-1P01715 115 aa11.79□□□□□ -0.52
SDC1-202ENST00000381150 RBM11P57052 281 aaKnown RBP11.79□□□□□ -0.52
SDC1-202ENST00000381150 PPP1CBP62140 327 aa11.79□□□□□ -0.52
SDC1-202ENST00000381150 LHFPL2Q6ZUX7 228 aa11.79□□□□□ -0.52
SDC1-202ENST00000381150 TMEM54Q969K7 222 aa11.79□□□□□ -0.52
SDC1-202ENST00000381150 DERL1Q9BUN8 251 aa11.79□□□□□ -0.52
SDC1-202ENST00000381150 TPRP12270 2363 aaKnown RBP11.79□□□□□ -0.52
SDC1-202ENST00000381150 DNAJC13O75165 2243 aa11.79□□□□□ -0.52
SDC1-202ENST00000381150 IGKV1D-33P01593 117 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 IGKV1-33P01594 117 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 C1QTNF9P0C862 333 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 CBLN1P23435 193 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 CD82P27701 267 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 MMDQ15546 238 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 NMSQ5H8A3 153 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 FFAR4Q5NUL3 377 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 DNLZQ5SXM8 178 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 FOXL2NBQ6ZUU3 175 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 NCKAP5O14513 1909 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 NDUFB4O95168 129 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 CDKN1AP38936 164 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 DSCR4P56555 118 aaPredicted RBP11.78□□□□□ -0.52
SDC1-202ENST00000381150 SLC35B1P78383 322 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 C10orf128Q5T292 105 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 ZIC4Q8N9L1 334 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 NABP1Q96AH0 204 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 TMEM56Q96MV1 263 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 OR2J1Q9GZK6 312 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 TMEM56-RWDD3S4R434 201 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 DOCK10Q96BY6 2186 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 PCSK5Q92824 1860 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 HEATR1Q9H583 2144 aaKnown RBP11.78□□□□□ -0.52
SDC1-202ENST00000381150 KIAA1324LA8MWY0 1029 aaPredicted RBP11.78□□□□□ -0.52
SDC1-202ENST00000381150 C11orf94C9JXX5 98 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 LILRA1O75019 489 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 F2RP25116 425 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 ATOH7Q8N100 152 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 CACNA1GO43497 2377 aa11.78□□□□□ -0.52
SDC1-202ENST00000381150 GVINP1Q7Z2Y8 2422 aa11.77□□□□□ -0.52
SDC1-202ENST00000381150 A0A096LPE4 126 aa11.77□□□□□ -0.52
SDC1-202ENST00000381150 A0A1W2PPZ6 126 aa11.77□□□□□ -0.52
SDC1-202ENST00000381150 SSR4P51571 173 aa11.77□□□□□ -0.52
SDC1-202ENST00000381150 PTTG1IPP53801 180 aa11.77□□□□□ -0.52
SDC1-202ENST00000381150 DCAF10Q5QP82 559 aa11.77□□□□□ -0.52
SDC1-202ENST00000381150 RPS19BP1Q86WX3 136 aaKnown RBP11.77□□□□□ -0.52
SDC1-202ENST00000381150 ZNF525Q8N782 197 aa11.77□□□□□ -0.52
SDC1-202ENST00000381150 CIB3Q96Q77 187 aaPredicted RBP11.77□□□□□ -0.52
SDC1-202ENST00000381150 LOC102724200A0A096LPH7 203 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms