RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 HIST1H2BJP06899 126 aa9.74□□□□□ -0.85
SMAD9-202ENST00000379826 NTF3P20783 257 aa9.74□□□□□ -0.85
SMAD9-202ENST00000379826 HIST1H2BOP23527 126 aa9.74□□□□□ -0.85
SMAD9-202ENST00000379826 HIST1H2BBP33778 126 aa9.74□□□□□ -0.85
SMAD9-202ENST00000379826 UCP3P55916 312 aa9.74□□□□□ -0.85
SMAD9-202ENST00000379826 HIST1H2BDP58876 126 aa9.74□□□□□ -0.85
SMAD9-202ENST00000379826 HIST1H2BCP62807 126 aa9.74□□□□□ -0.85
SMAD9-202ENST00000379826 HIST2H2BEQ16778 126 aa9.74□□□□□ -0.85
SMAD9-202ENST00000379826 SLC25A53Q5H9E4 307 aa9.74□□□□□ -0.85
SMAD9-202ENST00000379826 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.74□□□□□ -0.85
SMAD9-202ENST00000379826 TPRX1Q8N7U7 411 aa9.74□□□□□ -0.85
SMAD9-202ENST00000379826 FADS6Q8N9I5 356 aa9.74□□□□□ -0.85
SMAD9-202ENST00000379826 OR52L2PQ8NGH6 319 aa9.74□□□□□ -0.85
SMAD9-202ENST00000379826 HIST1H2BHQ93079 126 aa9.74□□□□□ -0.85
SMAD9-202ENST00000379826 OR4C12Q96R67 309 aa9.74□□□□□ -0.85
SMAD9-202ENST00000379826 HIST1H2BNQ99877 126 aa9.74□□□□□ -0.85
SMAD9-202ENST00000379826 HIST1H2BMQ99879 126 aa9.74□□□□□ -0.85
SMAD9-202ENST00000379826 CTDSP1Q9GZU7 261 aa9.74□□□□□ -0.85
SMAD9-202ENST00000379826 hCG_38984A0A1B0GV85 526 aa9.73□□□□□ -0.85
SMAD9-202ENST00000379826 NKX2-8O15522 239 aa9.73□□□□□ -0.85
SMAD9-202ENST00000379826 LYZL6O75951 148 aa9.73□□□□□ -0.85
SMAD9-202ENST00000379826 ZNF600Q6ZNG1 722 aa9.73□□□□□ -0.85
SMAD9-202ENST00000379826 C1orf147Q96MC9 270 aaPredicted RBP9.73□□□□□ -0.85
SMAD9-202ENST00000379826 FAM173AQ9BQD7 235 aa9.73□□□□□ -0.85
SMAD9-202ENST00000379826 ZNF552Q9H707 407 aaPredicted RBP9.73□□□□□ -0.85
SMAD9-202ENST00000379826 RPRMQ9NS64 109 aa9.73□□□□□ -0.85
SMAD9-202ENST00000379826 CEP290O15078 2479 aa9.73□□□□□ -0.85
SMAD9-202ENST00000379826 PMCHP20382 165 aa9.73□□□□□ -0.85
SMAD9-202ENST00000379826 AESQ08117 197 aa9.73□□□□□ -0.85
SMAD9-202ENST00000379826 P2RY6Q15077 328 aa9.73□□□□□ -0.85
SMAD9-202ENST00000379826 CHRNA10Q9GZZ6 450 aa9.73□□□□□ -0.85
SMAD9-202ENST00000379826 SOD3P08294 240 aa9.73□□□□□ -0.85
SMAD9-202ENST00000379826 ERVFC1-1P60608 527 aa9.73□□□□□ -0.85
SMAD9-202ENST00000379826 SIGLECL1Q8N7X8 197 aa9.73□□□□□ -0.85
SMAD9-202ENST00000379826 CIB3Q96Q77 187 aaPredicted RBP9.73□□□□□ -0.85
SMAD9-202ENST00000379826 TRGV5A0A0B4J1U4 118 aa9.73□□□□□ -0.85
SMAD9-202ENST00000379826 DUXBA0A1W2PPF3 345 aa9.73□□□□□ -0.85
SMAD9-202ENST00000379826 NABP1Q96AH0 204 aa9.73□□□□□ -0.85
SMAD9-202ENST00000379826 SMPD2O60906 423 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 EGR1P18146 543 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 MEOX1P50221 254 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 TPPP2P59282 170 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 NUFIP2Q7Z417 695 aaKnown RBP9.72□□□□□ -0.85
SMAD9-202ENST00000379826 PRSS33Q8NF86 280 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 ANAPC16Q96DE5 110 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 LIME1Q9H400 295 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 MANBALQ9NQG1 85 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 KIAA1324LA8MWY0 1029 aaPredicted RBP9.72□□□□□ -0.85
SMAD9-202ENST00000379826 HAND1O96004 215 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 SPACA3Q8IXA5 215 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 SSMEM1Q8WWF3 244 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 HS3ST3B1Q9Y662 390 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 TRAV38-1A0A0B4J264 116 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 C1QTNF9BB2RNN3 333 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 M0R1X1 148 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 C1QTNF9P0C862 333 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 ERVFRD-1P60508 538 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 TCFL5Q9UL49 500 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 OR2H2O95918 312 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 IGLV3-19P01714 112 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 SOX8P57073 446 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 CMTM2Q8TAZ6 248 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 BORCS7Q96B45 105 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 THBS3P49746 956 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 CTAG1AP78358 180 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 COL10A1Q03692 680 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 MOB1BQ7L9L4 216 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 TMPRSS7Q7RTY8 843 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 OR5A2Q8NGI9 324 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 FKBP11Q9NYL4 201 aa9.72□□□□□ -0.85
SMAD9-202ENST00000379826 HRASP01112 189 aa9.71□□□□□ -0.85
SMAD9-202ENST00000379826 HGFACQ04756 655 aa9.71□□□□□ -0.85
SMAD9-202ENST00000379826 CYB5R2Q6BCY4 276 aa9.71□□□□□ -0.85
SMAD9-202ENST00000379826 TAF15Q92804 592 aaKnown RBP eCLIP9.71□□□□□ -0.85
SMAD9-202ENST00000379826 BTF3L4Q96K17 158 aa9.71□□□□□ -0.85
SMAD9-202ENST00000379826 TXN2Q99757 166 aa9.71□□□□□ -0.85
SMAD9-202ENST00000379826 WDR54Q9H977 334 aa9.71□□□□□ -0.85
SMAD9-202ENST00000379826 MSRB2Q9Y3D2 182 aa9.71□□□□□ -0.85
SMAD9-202ENST00000379826 OR7C2O60412 319 aa9.71□□□□□ -0.85
SMAD9-202ENST00000379826 MEF2BQ02080 365 aaPredicted RBP9.71□□□□□ -0.85
SMAD9-202ENST00000379826 RCC1LQ96I51 464 aaKnown RBP9.71□□□□□ -0.85
SMAD9-202ENST00000379826 ATG101Q9BSB4 218 aa9.71□□□□□ -0.85
SMAD9-202ENST00000379826 PLA2G2EQ9NZK7 142 aa9.71□□□□□ -0.85
SMAD9-202ENST00000379826 TINAGQ9UJW2 476 aa9.71□□□□□ -0.85
SMAD9-202ENST00000379826 SSTP61278 116 aa9.71□□□□□ -0.86
SMAD9-202ENST00000379826 MDP1Q86V88 176 aa9.71□□□□□ -0.86
SMAD9-202ENST00000379826 TEX29Q8N6K0 151 aa9.71□□□□□ -0.86
SMAD9-202ENST00000379826 PPP1R35Q8TAP8 253 aa9.71□□□□□ -0.86
SMAD9-202ENST00000379826 GATAD1Q8WUU5 269 aa9.71□□□□□ -0.86
SMAD9-202ENST00000379826 VAMP8Q9BV40 100 aa9.71□□□□□ -0.86
SMAD9-202ENST00000379826 DLL3Q9NYJ7 618 aa9.71□□□□□ -0.86
SMAD9-202ENST00000379826 TREM2Q9NZC2 230 aa9.71□□□□□ -0.86
SMAD9-202ENST00000379826 LRRC30A6NM36 301 aa9.71□□□□□ -0.86
SMAD9-202ENST00000379826 FCN1O00602 326 aa9.71□□□□□ -0.86
SMAD9-202ENST00000379826 ST8SIA5O15466 376 aa9.71□□□□□ -0.86
SMAD9-202ENST00000379826 RHBDL1O75783 438 aa9.71□□□□□ -0.86
SMAD9-202ENST00000379826 SELEP16581 610 aa9.71□□□□□ -0.86
SMAD9-202ENST00000379826 CLCF1Q9UBD9 225 aa9.71□□□□□ -0.86
SMAD9-202ENST00000379826 MPC1Q9Y5U8 109 aa9.71□□□□□ -0.86
SMAD9-202ENST00000379826 OR5B21A6NL26 309 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms