RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 METRNQ9UJH8 293 aa16.27■□□□□ 0.2
SSU72-204ENST00000378726 MT-ND4LP03901 98 aa16.27■□□□□ 0.19
SSU72-204ENST00000378726 PRDX2P32119 198 aa16.27■□□□□ 0.19
SSU72-204ENST00000378726 COL10A1Q03692 680 aa16.27■□□□□ 0.19
SSU72-204ENST00000378726 CHD3Q12873 2000 aaKnown RBP16.27■□□□□ 0.19
SSU72-204ENST00000378726 RNF212Q495C1 297 aa16.27■□□□□ 0.19
SSU72-204ENST00000378726 KRBOX4Q5JUW0 171 aa16.27■□□□□ 0.19
SSU72-204ENST00000378726 ADGRG4Q8IZF6 3080 aa16.27■□□□□ 0.19
SSU72-204ENST00000378726 GCSAMQ8N6F7 178 aa16.27■□□□□ 0.19
SSU72-204ENST00000378726 LRTM2Q8N967 370 aa16.27■□□□□ 0.19
SSU72-204ENST00000378726 ZNF565Q8N9K5 539 aa16.27■□□□□ 0.19
SSU72-204ENST00000378726 KDF1Q8NAX2 398 aaPredicted RBP16.27■□□□□ 0.19
SSU72-204ENST00000378726 SUCNR1Q9BXA5 334 aa16.27■□□□□ 0.19
SSU72-204ENST00000378726 NIT2Q9NQR4 276 aa16.27■□□□□ 0.19
SSU72-204ENST00000378726 MBNL3Q9NUK0 354 aaKnown RBP16.27■□□□□ 0.19
SSU72-204ENST00000378726 IGHV1-46P01743 117 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 OR4A8P0C604 315 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 AGAP20933 346 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 CHRNB4P30926 498 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 TNFAIP6P98066 277 aaPredicted RBP16.26■□□□□ 0.19
SSU72-204ENST00000378726 AESQ08117 197 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 ADIPOQQ15848 244 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 GPR157Q5UAW9 335 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 CD177Q8N6Q3 437 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 CCDC71LQ8N9Z2 235 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 HSD17B11Q8NBQ5 300 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 IL19Q9UHD0 177 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 RCL1Q9Y2P8 373 aaKnown RBP16.26■□□□□ 0.19
SSU72-204ENST00000378726 IGKV1D-13A0A0B4J2D9 117 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 A0A1B0GV50 99 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 TMEM30CPA0ZSE6 113 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 FAM90A27PA6NNH2 459 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.26■□□□□ 0.19
SSU72-204ENST00000378726 PRH1P02810 166 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 IGKV1-13P0DP09 117 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 PSG2P11465 335 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 SLC35E4Q6ICL7 350 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 ADAM5Q6NVV9 412 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 ZNF561Q8N587 486 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 CABLES2Q9BTV7 478 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 OR51M1Q9H341 326 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 SEBOXQ9HB31 216 aaPredicted RBP16.26■□□□□ 0.19
SSU72-204ENST00000378726 CACNA1AO00555 2505 aa16.26■□□□□ 0.19
SSU72-204ENST00000378726 GATA4P43694 442 aa16.25■□□□□ 0.19
SSU72-204ENST00000378726 UBALD1Q8TB05 177 aa16.25■□□□□ 0.19
SSU72-204ENST00000378726 FBXO7Q9Y3I1 522 aa16.25■□□□□ 0.19
SSU72-204ENST00000378726 OR2W1Q9Y3N9 320 aa16.25■□□□□ 0.19
SSU72-204ENST00000378726 hCG_1809904A0A1W2PP81 198 aa16.25■□□□□ 0.19
SSU72-204ENST00000378726 A0A1W2PR64 198 aa16.25■□□□□ 0.19
SSU72-204ENST00000378726 A0A1W2PRV1 198 aa16.25■□□□□ 0.19
SSU72-204ENST00000378726 UMAD1C9J7I0 102 aa16.25■□□□□ 0.19
SSU72-204ENST00000378726 PHF1O43189 567 aaPredicted RBP16.25■□□□□ 0.19
SSU72-204ENST00000378726 LHBP01229 141 aa16.25■□□□□ 0.19
SSU72-204ENST00000378726 TNFSF4P23510 183 aa16.25■□□□□ 0.19
SSU72-204ENST00000378726 S100PP25815 95 aa16.25■□□□□ 0.19
SSU72-204ENST00000378726 OR3A1P47881 315 aa16.25■□□□□ 0.19
SSU72-204ENST00000378726 ZNF818PQ6ZRF7 136 aa16.25■□□□□ 0.19
SSU72-204ENST00000378726 H1FOOQ8IZA3 346 aaPredicted RBP16.25■□□□□ 0.19
SSU72-204ENST00000378726 LGI3Q8N145 548 aa16.25■□□□□ 0.19
SSU72-204ENST00000378726 TUBA4BQ9H853 241 aa16.25■□□□□ 0.19
SSU72-204ENST00000378726 GCM1Q9NP62 436 aa16.25■□□□□ 0.19
SSU72-204ENST00000378726 OR1A1Q9P1Q5 309 aa16.25■□□□□ 0.19
SSU72-204ENST00000378726 ERRFI1Q9UJM3 462 aaPredicted RBP16.25■□□□□ 0.19
SSU72-204ENST00000378726 RFNGQ9Y644 331 aa16.25■□□□□ 0.19
SSU72-204ENST00000378726 RELNP78509 3460 aa16.24■□□□□ 0.19
SSU72-204ENST00000378726 MPPED1O15442 326 aa16.24■□□□□ 0.19
SSU72-204ENST00000378726 ST8SIA3O43173 380 aa16.24■□□□□ 0.19
SSU72-204ENST00000378726 TMEM182Q6ZP80 229 aaPredicted RBP16.24■□□□□ 0.19
SSU72-204ENST00000378726 FAM90A1Q86YD7 464 aa16.24■□□□□ 0.19
SSU72-204ENST00000378726 FAM185AQ8N0U4 392 aa16.24■□□□□ 0.19
SSU72-204ENST00000378726 COQ2Q96H96 371 aa16.24■□□□□ 0.19
SSU72-204ENST00000378726 CCL28Q9NRJ3 127 aa16.24■□□□□ 0.19
SSU72-204ENST00000378726 KCNIP1Q9NZI2 227 aa16.24■□□□□ 0.19
SSU72-204ENST00000378726 NBASA2RRP1 2371 aa16.24■□□□□ 0.19
SSU72-204ENST00000378726 IGKV1D-17A0A075B6S4 117 aa16.23■□□□□ 0.19
SSU72-204ENST00000378726 IGHV3OR15-7A0A075B7D8 119 aa16.23■□□□□ 0.19
SSU72-204ENST00000378726 NKX2-6A6NCS4 301 aa16.23■□□□□ 0.19
SSU72-204ENST00000378726 VSTM5A8MXK1 200 aa16.23■□□□□ 0.19
SSU72-204ENST00000378726 HSD17B6O14756 317 aa16.23■□□□□ 0.19
SSU72-204ENST00000378726 ARG1P05089 322 aa16.23■□□□□ 0.19
SSU72-204ENST00000378726 PPP1CCP36873 323 aaKnown RBP16.23■□□□□ 0.19
SSU72-204ENST00000378726 GABRA2P47869 451 aa16.23■□□□□ 0.19
SSU72-204ENST00000378726 FBXL19-AS1Q494R0 122 aa16.23■□□□□ 0.19
SSU72-204ENST00000378726 TP53RKQ96S44 253 aa16.23■□□□□ 0.19
SSU72-204ENST00000378726 TPRP12270 2363 aaKnown RBP16.23■□□□□ 0.19
SSU72-204ENST00000378726 HSPA12AO43301 675 aa16.23■□□□□ 0.19
SSU72-204ENST00000378726 OR13C7P0DN81 318 aa16.23■□□□□ 0.19
SSU72-204ENST00000378726 RAB5AP20339 215 aa16.23■□□□□ 0.19
SSU72-204ENST00000378726 ADORA2A-AS1P86434 159 aa16.23■□□□□ 0.19
SSU72-204ENST00000378726 NCMAPQ5T1S8 102 aa16.23■□□□□ 0.19
SSU72-204ENST00000378726 MEX3BQ6ZN04 569 aaKnown RBP16.23■□□□□ 0.19
SSU72-204ENST00000378726 FAM24BQ8N5W8 94 aa16.23■□□□□ 0.19
SSU72-204ENST00000378726 OR4D5Q8NGN0 318 aa16.23■□□□□ 0.19
SSU72-204ENST00000378726 CD300LFQ8TDQ1 290 aa16.23■□□□□ 0.19
SSU72-204ENST00000378726 RNASE6Q93091 150 aaKnown RBP16.23■□□□□ 0.19
SSU72-204ENST00000378726 METTL1Q9UBP6 276 aaKnown RBP16.23■□□□□ 0.19
SSU72-204ENST00000378726 STRAPQ9Y3F4 350 aaKnown RBP16.23■□□□□ 0.19
SSU72-204ENST00000378726 ROS1P08922 2347 aa16.22■□□□□ 0.19
SSU72-204ENST00000378726 C3orf85A0A1B0GTC6 90 aa16.22■□□□□ 0.19
SSU72-204ENST00000378726 NPIPB11E5RHQ5 1161 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms