RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 CFHR4Q92496 578 aa10.64□□□□□ -0.71
CKAP2-202ENST00000378034 GCDHQ92947 438 aaPredicted RBP10.64□□□□□ -0.71
CKAP2-202ENST00000378034 S1PR3Q99500 378 aa10.64□□□□□ -0.71
CKAP2-202ENST00000378034 AGMATQ9BSE5 352 aa10.64□□□□□ -0.71
CKAP2-202ENST00000378034 NXF2Q9GZY0 626 aaKnown RBP10.64□□□□□ -0.71
CKAP2-202ENST00000378034 RABL2AQ9UBK7 228 aaPredicted RBP10.64□□□□□ -0.71
CKAP2-202ENST00000378034 RABL2BQ9UNT1 228 aa10.64□□□□□ -0.71
CKAP2-202ENST00000378034 MRPS7Q9Y2R9 242 aaKnown RBP10.64□□□□□ -0.71
CKAP2-202ENST00000378034 SULT1C2O00338 296 aa10.63□□□□□ -0.71
CKAP2-202ENST00000378034 ST8SIA5O15466 376 aa10.63□□□□□ -0.71
CKAP2-202ENST00000378034 FOXL1Q12952 345 aa10.63□□□□□ -0.71
CKAP2-202ENST00000378034 ZNF833PQ6ZTB9 187 aa10.63□□□□□ -0.71
CKAP2-202ENST00000378034 DRAM1Q8N682 238 aa10.63□□□□□ -0.71
CKAP2-202ENST00000378034 DGCR14Q96DF8 476 aaKnown RBP10.63□□□□□ -0.71
CKAP2-202ENST00000378034 MIXL1Q9H2W2 232 aa10.63□□□□□ -0.71
CKAP2-202ENST00000378034 IFT46Q9NQC8 304 aa10.63□□□□□ -0.71
CKAP2-202ENST00000378034 C1RLQ9NZP8 487 aa10.63□□□□□ -0.71
CKAP2-202ENST00000378034 EXTL2Q9UBQ6 330 aa10.63□□□□□ -0.71
CKAP2-202ENST00000378034 ANAPC10Q9UM13 185 aa10.63□□□□□ -0.71
CKAP2-202ENST00000378034 GAB2Q9UQC2 676 aa10.63□□□□□ -0.71
CKAP2-202ENST00000378034 A3GALT2U3KPV4 340 aa10.63□□□□□ -0.71
CKAP2-202ENST00000378034 CTDSP2O14595 271 aa10.63□□□□□ -0.71
CKAP2-202ENST00000378034 PTHLHP12272 177 aa10.63□□□□□ -0.71
CKAP2-202ENST00000378034 CD1BP29016 333 aa10.63□□□□□ -0.71
CKAP2-202ENST00000378034 COMPP49747 757 aaPredicted RBP10.63□□□□□ -0.71
CKAP2-202ENST00000378034 ARPC4P59998 168 aa10.63□□□□□ -0.71
CKAP2-202ENST00000378034 MOB3BQ86TA1 216 aa10.63□□□□□ -0.71
CKAP2-202ENST00000378034 H1FOOQ8IZA3 346 aaPredicted RBP10.63□□□□□ -0.71
CKAP2-202ENST00000378034 GVQW1Q8N7I0 195 aa10.63□□□□□ -0.71
CKAP2-202ENST00000378034 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.63□□□□□ -0.71
CKAP2-202ENST00000378034 MCFD2Q8NI22 146 aa10.63□□□□□ -0.71
CKAP2-202ENST00000378034 GPX8Q8TED1 209 aa10.63□□□□□ -0.71
CKAP2-202ENST00000378034 CAPSLQ8WWF8 208 aa10.63□□□□□ -0.71
CKAP2-202ENST00000378034 AKR1E2Q96JD6 320 aa10.63□□□□□ -0.71
CKAP2-202ENST00000378034 PARP12Q9H0J9 701 aaKnown RBP10.63□□□□□ -0.71
CKAP2-202ENST00000378034 RANBP3Q9H6Z4 567 aaPredicted RBP10.63□□□□□ -0.71
CKAP2-202ENST00000378034 SAA2-SAA4A0A096LPE2 208 aa10.62□□□□□ -0.71
CKAP2-202ENST00000378034 A0A1B0GUS0 222 aa10.62□□□□□ -0.71
CKAP2-202ENST00000378034 SAA2P0DJI9 122 aaPredicted RBP10.62□□□□□ -0.71
CKAP2-202ENST00000378034 NAT1P18440 290 aa10.62□□□□□ -0.71
CKAP2-202ENST00000378034 REG1BP48304 166 aa10.62□□□□□ -0.71
CKAP2-202ENST00000378034 EBI3Q14213 229 aa10.62□□□□□ -0.71
CKAP2-202ENST00000378034 CCBE1Q6UXH8 406 aaPredicted RBP10.62□□□□□ -0.71
CKAP2-202ENST00000378034 LAX1Q8IWV1 398 aa10.62□□□□□ -0.71
CKAP2-202ENST00000378034 OR4F5Q8NH21 305 aa10.62□□□□□ -0.71
CKAP2-202ENST00000378034 OR56B4Q8NH76 319 aa10.62□□□□□ -0.71
CKAP2-202ENST00000378034 C6orf62Q9GZU0 229 aaPredicted RBP10.62□□□□□ -0.71
CKAP2-202ENST00000378034 ZNF221Q9UK13 617 aa10.62□□□□□ -0.71
CKAP2-202ENST00000378034 DPPA5A6NC42 116 aa10.61□□□□□ -0.71
CKAP2-202ENST00000378034 TSPAN9O75954 239 aa10.61□□□□□ -0.71
CKAP2-202ENST00000378034 OR2F2O95006 317 aa10.61□□□□□ -0.71
CKAP2-202ENST00000378034 SNRNP70P08621 437 aaKnown RBP10.61□□□□□ -0.71
CKAP2-202ENST00000378034 SNX29P2Q8IUI4 249 aa10.61□□□□□ -0.71
CKAP2-202ENST00000378034 OR5AP2Q8NGF4 316 aa10.61□□□□□ -0.71
CKAP2-202ENST00000378034 RBM14Q96PK6 669 aaKnown RBP10.61□□□□□ -0.71
CKAP2-202ENST00000378034 NPFFR1Q9GZQ6 430 aa10.61□□□□□ -0.71
CKAP2-202ENST00000378034 MMP27Q9H306 513 aa10.61□□□□□ -0.71
CKAP2-202ENST00000378034 NECAP2Q9NVZ3 263 aa10.61□□□□□ -0.71
CKAP2-202ENST00000378034 MMP24Q9Y5R2 645 aa10.61□□□□□ -0.71
CKAP2-202ENST00000378034 CHST1O43916 411 aa10.61□□□□□ -0.71
CKAP2-202ENST00000378034 GPR12P47775 334 aa10.61□□□□□ -0.71
CKAP2-202ENST00000378034 OR3A3P47888 321 aa10.61□□□□□ -0.71
CKAP2-202ENST00000378034 RAG2P55895 527 aa10.61□□□□□ -0.71
CKAP2-202ENST00000378034 TMEM219Q86XT9 240 aa10.61□□□□□ -0.71
CKAP2-202ENST00000378034 OR2T10Q8NGZ9 312 aa10.61□□□□□ -0.71
CKAP2-202ENST00000378034 SNAPC3Q92966 411 aa10.61□□□□□ -0.71
CKAP2-202ENST00000378034 ABHD14BQ96IU4 210 aa10.61□□□□□ -0.71
CKAP2-202ENST00000378034 ZNF251Q9BRH9 671 aa10.61□□□□□ -0.71
CKAP2-202ENST00000378034 C16orf95Q9H693 158 aa10.61□□□□□ -0.71
CKAP2-202ENST00000378034 OR2W1Q9Y3N9 320 aa10.61□□□□□ -0.71
CKAP2-202ENST00000378034 COL6A5A8TX70 2615 aa10.6□□□□□ -0.71
CKAP2-202ENST00000378034 M0QZK8 103 aa10.6□□□□□ -0.71
CKAP2-202ENST00000378034 SLC22A5O76082 557 aa10.6□□□□□ -0.71
CKAP2-202ENST00000378034 OR8U9P0C7N5 309 aa10.6□□□□□ -0.71
CKAP2-202ENST00000378034 CD24P25063 80 aa10.6□□□□□ -0.71
CKAP2-202ENST00000378034 TAS2R46P59540 309 aa10.6□□□□□ -0.71
CKAP2-202ENST00000378034 MRPS10P82664 201 aaKnown RBP10.6□□□□□ -0.71
CKAP2-202ENST00000378034 RELBQ01201 579 aa10.6□□□□□ -0.71
CKAP2-202ENST00000378034 LSAMPQ13449 338 aa10.6□□□□□ -0.71
CKAP2-202ENST00000378034 HES1Q14469 280 aa10.6□□□□□ -0.71
CKAP2-202ENST00000378034 OR4C13Q8NGP0 309 aa10.6□□□□□ -0.71
CKAP2-202ENST00000378034 OR8U1Q8NH10 309 aa10.6□□□□□ -0.71
CKAP2-202ENST00000378034 SPATA3Q8NHX4 192 aa10.6□□□□□ -0.71
CKAP2-202ENST00000378034 DIRAS2Q96HU8 199 aa10.6□□□□□ -0.71
CKAP2-202ENST00000378034 NABP2Q9BQ15 211 aa10.6□□□□□ -0.71
CKAP2-202ENST00000378034 DCUN1D5Q9BTE7 237 aa10.6□□□□□ -0.71
CKAP2-202ENST00000378034 BEX1Q9HBH7 125 aa10.6□□□□□ -0.71
CKAP2-202ENST00000378034 RBM7Q9Y580 266 aaKnown RBP10.6□□□□□ -0.71
CKAP2-202ENST00000378034 MEIS3P1A6NDR6 274 aa10.59□□□□□ -0.71
CKAP2-202ENST00000378034 TUSC2O75896 110 aa10.59□□□□□ -0.71
CKAP2-202ENST00000378034 IGKV1D-33P01593 117 aa10.59□□□□□ -0.71
CKAP2-202ENST00000378034 IGKV1-33P01594 117 aa10.59□□□□□ -0.71
CKAP2-202ENST00000378034 TMEM11P17152 192 aa10.59□□□□□ -0.71
CKAP2-202ENST00000378034 RCVRNP35243 200 aa10.59□□□□□ -0.71
CKAP2-202ENST00000378034 CDK10Q15131 360 aa10.59□□□□□ -0.71
CKAP2-202ENST00000378034 PYHIN1Q6K0P9 492 aa10.59□□□□□ -0.71
CKAP2-202ENST00000378034 Q6ZSV7 163 aa10.59□□□□□ -0.71
CKAP2-202ENST00000378034 SLC25A33Q9BSK2 321 aa10.59□□□□□ -0.71
CKAP2-202ENST00000378034 MRPL20Q9BYC9 149 aaKnown RBP10.59□□□□□ -0.71
CKAP2-202ENST00000378034 RNF150Q9ULK6 438 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms